Constructing a physical map from linked reads. The physical map can then be used to scaffold draft genome assemblies.
If you use Physlr in your research, please cite:
Afshinfard A, Jackman SD, Wong J, Coombe L, Chu J, Nikolic V, Dilek G, Malkoç Y, Warren RL, Birol I. Physlr: Next-Generation Physical Maps. DNA. 2022 Jun 10;2(2):116-30. doi: https://doi.org/10.3390/dna2020009
GitHub release page for Physlr: https://github.com/bcgsc/physlr/release