POG for medical professionals
POG reports
*Access to POG data is restricted to POG Clinicians
Integrated Pipeline Reports (IPR)
IPR is a web-based graphical interface that provides clinicians a summary of the genomic results.
To learn more, please see the Platform for Oncogenomic Reporting and Interpretation (PORI) page for a live demo and videos on various sections of IPR to help new users in navigating the system including:
ImageDrive houses the de-identified clinical research images.
Educational videos
Special thanks to BC Cancer Medical Staff Engagement Society for their funding support.
Clinical Genomics Testing
Presented by Dr. Howard Lim, MD, FRCPC.
Next generation sequencing | Availability of genomic tests nationally and internationally | Issues and challenges in genomic testing | Managing incidental germline findings
Somatic Alterations in Cancer Genomes
Presented by Dr. Stephen Yip, MD, PhD, FRCPC.
Somatic alterations in cancer genomes | Alternatives to whole genome sequencing | Integration of RNAseq with whole genome sequencing
Relevance of Different Types of Variation
Presented by Dr. Kasmintan Schrader, MBBS, FRCPC, PhD, DABMG.
Germline vs. somatic variations | Tumour-normal sequencing | Determining somatic variants
Use of Clinical Genetic Information from Genome Sequencing
Presented by Dr. Kasmintan Schrader, MBBS, FRCPC, PhD, DABMG.
Using clinical genetic information | Genome sequencing | Variants of uncertain significance | Mutational signatures | Cancer susceptibility | Drug metabolism | Response to therapy | Side effects | Hereditary cancer assessment | Ethical implications
Bioinformatics and Analysis of Data
Presented by Dr. Martin Jones, PhD.
Analysis of genomic data | Integrative analysis | Organizing and interpreting genomic analyses | Annotation | Quality control | Data curation and management
Tumor Sequencing
Presented by Hereditary Cancer Program, BC Cancer
Cancer cells | Risk factors | Cancer mutations | Hereditary cancer | Undertaking tumor sequencing
Genetic Testing
Presented by Hereditary Cancer Program, BC Cancer
Multiplex gene panel testing | Interpreting expected and unexpected results | Process for undergoing multiplex gene panel testing
Online resources
A repository of genomics and health impact information compiled by the Centers for Disease Control (CDC). Resources include a searchable knowledge base, glossary, weekly updates and video clips on genomics, reports and publications, podcasts and videos as well as information on genomic testing.
The Genetics/Genomics Competency Center (G2C2) is a project funded and maintained by the National Human Genome Research Institute (NHGRI) of the National Institutes of Health (NIH). The website offers free high quality educational resources aimed at providing health professionals and practitioners with self-directed learning in genetics and genomics. The website includes an online repository of educational materials, peer-reviewed collections, resources mapped to specific genomics competencies, as well as resources searchable by discipline/profession, genomic topics, and societies or organizations.
The genome information and resource centre hosted by the National Center for Biotechnology Information (NCBI) of the National Library of Medicine (NLM).
Nature Collection: Cancer Genomics, From Bench to Bedside: A comprehensive collection of articles from Nature Reviews Genetics, Nature Reviews Clinical Oncology and Nature Reviews Cancer. The collection covers all topics, bench-to-bedside, relating to cancer genomics. Articles and review papers can be accessed free by researchers, clinicians and members of the general public.
The Genomics Education Programme is an online learning portal hosted by the UK’s National Health Service (NHS). The website offers online courses in genomics, bioinformatics, whole genome sequencing and tumour assessment along with education and training resources for clinicians and practitioners. Courses are free for certain UK-based users and pay-to-access for all other users. Educational videos are also available here.
Healio is an in-depth clinical information website providing information and resources on a variety of health topics. The website offers a number of useful genomics resources for clinicians and oncologists including videos, tumor boards and genomics learning modules. The learning modules are self-paced and include the following topics: genomics primer, whole genome sequencing, genomic medicine in clinical practice, tumor board cases (case-based learning), pathology assessment of tumor tissue, and collaborative care.
Genetics Education Canada, curated by University professors in Ontario and funded by the Children’s Hospital of Eastern Ontario (CHEO) with in-kind support from Mount Sinai Hospital, Sinai Health Systems in Ontario.
Adventures in genomics web portal, hosted by the Illumina Scientific Affairs team, provides video-based learning on topics related to genomics and cancer. Access Illumina's video hub for hundreds of free educational videos, including a five part genomics 101 series.
Create an account through Genome Medical for free access to genomics resources including a collection of videos relevant to genomics, whole genome sequencing and genomics in healthcare.
Contact us
For more information: POGinfo@bcgsc.ca
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