Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EIF1AY Gene 0 2.38 80.65 34.68 28.30 2.14 1.19 11.19 0.97 39.15 35.19 0.68 1.27 1.49 107.54 167.86 105.22 102.11 24.71 26.92 1.76 10.73 35.27 15.70 2 361365 Transcript 0 0.00 118.02 20.38 18.28 0.00 0.00 13.08 0.00 20.20 22.10 0.00 0.00 0.00 69.40 61.41 60.92 86.61 24.25 35.16 0.00 32.97 33.24 33.73 3 465253 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 382772 Transcript 0 0.00 9.80 2.84 1.50 0.00 0.00 0.00 0.00 3.79 3.71 0.00 0.00 0.00 4.41 0.00 4.27 3.55 1.87 0.00 0.00 0.00 2.88 0.00 5 464196 Transcript 0 4.31 12.25 4.69 6.55 3.89 2.15 7.43 1.74 8.25 5.54 1.19 2.16 2.79 13.03 17.69 19.62 13.13 5.75 4.71 3.20 4.42 9.40 6.80 6 485584 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 0.00 148.45 23.42 16.96 0.00 0.00 23.71 0.00 17.68 21.68 0.00 0.00 0.00 105.99 76.18 105.24 161.81 44.96 63.12 0.00 63.09 46.61 63.46 8 E1_Ab KnownBoundary 0 0.00 240.62 40.42 32.60 0.00 0.00 47.56 0.00 29.63 31.13 0.00 0.00 0.00 169.70 83.19 169.27 237.03 68.94 89.88 0.00 111.63 75.32 106.11 9 E1_Ac KnownBoundary 0 0.00 262.06 38.05 13.92 0.00 0.00 26.06 0.00 37.15 28.98 0.00 0.00 0.00 207.78 244.89 290.52 226.09 85.89 103.06 0.00 21.50 48.25 83.66 10 ER1b ExonRegion 0 0.00 299.44 49.47 31.35 0.00 0.00 40.13 0.00 49.17 47.31 0.00 0.00 0.00 334.67 281.24 365.94 315.03 114.44 131.40 0.00 90.63 84.51 120.59 11 ER1c ExonRegion 0 0.00 394.84 66.80 61.37 0.00 0.00 54.03 0.00 87.31 72.85 0.00 0.00 0.00 635.00 636.75 825.16 683.96 192.03 171.26 0.00 53.05 91.56 96.44 12 E1a_E2a KnownJunction 1 0.00 149.05 108.60 56.80 0.00 0.00 14.49 1.60 111.08 108.79 2.11 0.00 0.00 161.58 201.99 182.52 446.75 135.06 89.23 0.00 88.84 27.92 24.84 13 ER2a ExonRegion 1 0.00 123.08 112.35 78.25 0.00 0.00 5.89 0.00 119.14 115.95 0.00 0.52 0.00 347.02 332.88 276.83 660.38 107.48 121.35 0.00 78.91 97.43 67.09 14 E2_Da NovelBoundary 0 0.00 3.09 2.84 1.83 0.00 0.00 4.50 0.00 3.27 0.00 0.00 0.00 0.00 0.00 5.44 27.17 20.57 2.49 0.00 0.00 0.00 5.51 16.90 15 E2a_E3a KnownJunction 0 0.00 161.16 137.43 125.63 0.00 0.00 3.40 0.00 156.60 130.71 0.00 0.00 0.00 724.77 825.39 724.51 1042.36 198.02 252.71 0.00 41.64 153.33 190.53 16 ER3a ExonRegion 0 0.00 195.15 177.66 124.81 0.00 0.00 34.65 0.00 171.51 144.33 0.00 3.08 0.00 740.75 963.63 968.80 530.65 228.13 216.64 0.00 26.19 144.64 109.25 17 E3a_E4a KnownJunction 0 0.00 362.90 154.40 98.69 0.00 0.00 67.70 0.00 161.92 130.41 0.00 0.00 0.00 371.24 603.75 370.42 459.19 98.29 53.65 0.00 32.99 130.92 25.27 18 E3a_E5c KnownJunction 0 0.00 9.80 2.84 1.50 0.00 0.00 0.00 0.00 3.79 3.71 0.00 0.00 0.00 4.41 0.00 4.27 3.55 1.87 0.00 0.00 0.00 2.88 0.00 19 ER4a ExonRegion 0 0.00 457.83 157.57 94.65 0.00 0.00 61.11 0.00 153.35 146.78 0.00 0.00 0.00 389.98 661.20 378.16 440.57 87.97 88.88 0.00 32.32 139.55 27.87 20 E4_Da NovelBoundary 0 0.00 0.00 1.42 3.50 0.00 0.00 1.99 0.00 13.89 8.95 0.00 0.00 0.00 7.77 11.37 0.00 21.60 2.57 18.92 0.00 9.08 2.63 4.01 21 E4a_E5c KnownJunction 0 0.00 601.21 157.59 108.81 0.00 0.00 86.34 0.00 145.77 155.13 0.00 0.00 0.00 362.77 861.49 420.57 359.89 75.11 117.09 0.00 28.42 129.02 41.32 22 I4 Intron 0 0.00 5.04 0.88 1.35 0.00 0.00 2.08 0.00 7.35 2.58 0.00 0.00 0.00 13.20 3.83 19.78 11.18 2.23 1.54 0.00 1.87 8.07 4.09 23 I4_SR1 SilentIntronRegion 0 0.00 6.72 0.79 1.70 0.00 0.00 3.45 0.00 10.92 3.18 0.00 0.00 0.00 15.35 4.76 33.83 18.16 4.76 2.29 0.00 3.42 8.68 8.33 24 I4_AR2 ActiveIntronRegion 0 0.00 3.67 1.01 1.34 0.00 0.00 1.19 0.00 5.69 2.70 0.00 0.00 0.00 12.95 3.03 10.97 7.32 0.49 1.26 0.00 0.58 8.46 1.08 25 ER5a ExonRegion 0 8.50 15.52 5.53 7.93 7.49 4.30 11.79 3.49 11.12 8.01 2.27 3.94 4.13 17.80 26.04 28.48 16.43 8.26 8.63 5.95 6.66 14.15 10.27 26 E5_Ab KnownBoundary 0 0.00 0.00 6.56 2.06 0.00 0.00 2.25 0.00 5.64 9.13 0.00 0.00 0.00 19.37 9.15 16.83 24.87 0.00 0.00 0.00 0.00 5.27 4.35 27 ER5b ExonRegion 0 0.00 12.36 4.56 5.43 0.00 0.00 4.41 0.00 5.97 8.83 0.00 0.00 0.00 18.09 19.49 19.31 18.97 2.32 2.47 0.00 2.07 3.55 1.43 28 E5_Ac KnownBoundary 0 0.00 0.00 4.85 11.75 0.00 0.00 0.00 0.00 3.41 6.61 0.00 0.00 0.00 27.25 10.14 15.47 0.00 0.00 0.00 0.00 0.00 5.82 0.00 29 ER5c ExonRegion 0 0.00 542.41 217.36 163.46 0.00 0.00 57.42 0.00 213.77 187.16 0.00 0.00 0.00 489.32 1007.77 452.97 475.57 102.49 122.93 0.00 42.88 156.01 38.76 30 E5_Da KnownBoundary 0 0.00 0.00 0.00 1.83 0.00 0.00 4.42 0.00 1.48 1.37 0.00 0.00 0.00 3.00 6.30 11.54 13.28 0.00 0.00 0.00 2.29 0.00 3.24 31 E5a_E5d KnownJunction 0 0.00 576.81 257.15 210.06 0.00 0.00 22.74 0.00 237.32 240.12 0.00 0.00 0.00 569.78 1108.11 507.22 736.98 107.03 126.22 0.00 64.80 172.92 39.61 32 ER5d ExonRegion 0 0.00 3.07 0.88 2.89 0.00 0.00 3.49 0.00 3.47 2.12 0.00 0.00 0.00 4.00 6.55 7.35 1.33 1.71 1.15 0.00 0.03 6.47 1.11 33 E5_Db KnownBoundary 0 0.00 3.35 0.00 9.32 0.00 0.00 2.12 0.00 4.02 2.31 0.00 0.00 0.00 0.00 0.00 6.66 0.00 3.65 0.00 0.00 0.00 2.39 0.00 34 ER5e ExonRegion 0 0.11 8.97 3.85 5.17 0.29 0.00 3.07 0.00 5.37 3.06 0.10 0.38 1.44 8.26 9.33 10.76 9.84 3.23 0.80 0.45 2.17 4.65 3.33 35 E5_Ad KnownBoundary 0 0.00 12.10 2.63 0.00 0.00 0.00 2.16 0.00 2.95 2.71 0.00 0.00 0.00 5.24 13.35 4.36 4.77 2.36 0.00 0.00 0.00 0.00 0.00 36 ER5f ExonRegion 0 0.00 373.20 231.38 165.15 0.00 0.00 22.14 0.00 235.73 229.39 0.66 0.00 0.00 644.20 1232.87 456.34 554.88 85.20 106.10 0.00 42.48 210.34 42.37 37 E5_Dc NovelBoundary 0 0.00 0.00 0.00 10.26 0.00 0.00 0.00 0.00 4.43 2.90 0.00 0.00 0.00 8.06 13.47 3.50 4.77 1.62 9.32 0.00 0.00 3.12 11.10 38 E5c_E6a KnownJunction 0 0.00 291.20 242.39 159.69 0.00 0.00 15.19 0.00 253.82 207.13 2.68 0.00 0.00 578.20 1137.53 384.94 548.76 52.40 146.45 0.00 22.98 207.70 51.73 39 ER6a ExonRegion 0 0.00 247.11 131.72 100.53 0.00 0.00 17.01 0.00 148.54 138.53 0.13 0.00 0.00 322.59 659.62 210.95 271.00 33.98 55.67 0.00 14.13 120.48 22.77 40 E6_Da KnownBoundary 0 0.00 218.58 36.60 23.04 0.00 0.00 0.00 0.00 40.34 29.98 0.00 0.00 0.00 85.47 99.14 20.34 27.12 2.32 18.73 0.00 2.47 31.35 0.00 41 ER6b ExonRegion 0 0.00 87.58 17.34 19.60 0.00 0.00 2.46 0.00 22.71 22.51 0.00 0.00 0.00 32.81 46.63 16.61 11.41 3.53 7.20 0.00 2.85 19.88 4.00