Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NLGN4Y Gene 0 0.31 46.38 17.05 15.45 0.40 0.44 3.61 0.17 55.24 29.60 0.23 0.68 0.82 30.72 27.06 8.72 66.64 50.44 28.57 2.56 30.95 55.39 39.32 2 471252 Transcript 0 0.00 25.71 11.68 2.85 0.00 0.00 0.00 0.00 25.08 12.83 0.00 0.00 0.00 17.52 4.84 6.93 61.26 36.35 28.17 0.00 7.81 14.57 8.48 3 382872 Transcript 0 0.00 20.56 7.71 10.27 0.00 0.07 1.57 0.24 25.22 11.73 0.00 0.00 0.00 3.09 8.87 0.65 7.19 5.59 7.15 0.11 2.24 17.58 6.49 4 297967 Transcript 0 0.00 0.00 0.61 0.00 0.00 0.00 0.00 0.00 0.78 0.98 0.00 0.00 0.00 1.50 1.66 0.00 1.17 1.50 1.19 0.00 0.00 0.00 2.78 5 355905 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 476359 Transcript 0 7.08 15.67 2.94 3.87 4.84 8.68 10.31 1.06 9.16 6.32 2.14 15.27 18.61 13.94 25.81 17.25 21.35 10.05 18.67 15.93 4.64 7.76 12.20 7 382868 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 481089 Transcript 0 0.00 2.54 0.52 2.32 0.00 0.00 0.00 0.00 5.22 7.35 0.00 0.00 0.00 17.39 15.16 7.60 55.53 16.25 6.56 0.00 29.13 14.06 32.56 9 434873 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 339174 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 413217 Transcript 0 0.00 3.22 1.74 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.00 7.96 0.00 0.00 0.00 0.00 12 ER1a ExonRegion 0 0.00 24.00 6.98 2.00 0.00 0.00 0.00 0.00 12.05 8.49 0.00 0.00 0.00 13.15 5.22 5.66 65.59 33.69 33.65 0.00 6.92 9.37 9.12 13 E1_Ab KnownBoundary 0 0.00 12.17 16.44 1.56 0.00 0.00 0.00 0.00 10.71 5.86 0.00 0.00 0.00 9.71 0.00 8.54 56.57 11.57 9.22 0.00 13.59 0.00 0.00 14 ER1b ExonRegion 0 0.00 10.37 10.17 2.83 0.00 0.00 0.36 0.00 28.66 14.50 0.00 0.00 0.00 21.71 9.18 5.27 84.98 47.36 31.85 0.00 12.25 13.05 12.57 15 E1a_E5a KnownJunction 0 0.00 27.43 16.38 3.70 0.00 0.00 0.00 0.00 38.11 17.16 0.00 0.00 0.00 21.90 4.45 8.20 56.94 39.01 22.68 0.00 8.71 19.78 7.85 16 E1a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E2_Aa NovelBoundary 0 0.00 5.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.96 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 18 ER2a ExonRegion 0 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.00 0.25 0.44 0.00 0.00 0.00 3.01 3.33 0.00 2.33 0.68 2.39 0.00 0.00 0.00 1.21 19 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 0.00 4.35 20 ER3a ExonRegion 0 0.00 0.68 0.00 0.68 0.00 0.00 0.00 0.00 0.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.22 0.92 2.12 0.00 0.71 0.00 0.00 21 E3a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E4_Aa NovelBoundary 0 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 1.36 6.29 0.00 0.00 0.00 4.41 0.00 3.85 0.00 8.21 12.71 0.00 13.71 7.59 7.34 23 ER4a ExonRegion 1 0.00 2.39 1.04 1.48 0.00 0.00 0.00 0.00 4.59 5.14 0.00 0.00 0.00 1.41 20.43 0.84 17.65 4.14 4.09 0.00 9.58 12.32 12.96 24 E4_Ab KnownBoundary 1 0.00 11.91 1.83 3.66 0.00 0.00 0.00 0.00 13.08 12.63 0.00 0.00 0.00 2.12 39.93 11.19 76.67 24.71 13.37 0.00 31.44 34.35 40.04 25 ER4b ExonRegion 0 0.00 1.27 0.66 2.74 0.00 0.00 0.00 0.00 5.65 6.89 0.00 0.00 0.00 10.77 6.78 4.13 34.78 6.55 4.37 0.00 21.87 9.84 23.91 26 E4_Da KnownBoundary 0 0.00 2.96 1.83 1.76 0.00 0.00 0.00 0.00 5.93 3.57 0.00 0.00 0.00 5.47 0.00 0.00 12.81 0.00 0.00 0.00 2.97 0.00 11.69 27 E4a_E5a KnownJunction 0 0.00 2.70 0.00 3.16 0.00 0.00 0.00 0.00 5.84 9.56 0.00 0.00 0.00 33.37 9.89 14.36 93.41 28.35 9.04 0.00 48.68 15.80 52.16 28 ER4c ExonRegion 0 0.00 4.19 1.27 1.96 0.00 0.00 0.30 0.00 6.76 2.96 0.00 0.00 0.00 9.84 7.20 1.51 12.42 7.42 5.34 0.00 7.06 4.05 10.70 29 E4b_E5a KnownJunction 0 0.00 12.56 1.83 0.00 0.00 0.00 0.00 0.00 2.81 2.63 0.00 0.00 0.00 25.72 0.00 3.85 13.00 20.15 8.56 0.00 13.47 5.63 14.34 30 I4_AR1 ActiveIntronRegion 0 0.00 19.16 6.13 5.45 0.00 0.00 0.00 0.00 12.68 11.56 0.00 0.00 0.00 4.56 6.03 0.00 19.55 14.21 6.98 0.00 0.00 2.72 0.00 31 I4_AR2 ActiveIntronRegion 1 0.00 13.70 9.27 5.26 0.00 0.00 0.43 0.00 20.17 12.36 0.00 0.00 0.00 1.55 11.00 2.91 7.59 6.33 6.98 0.00 0.00 3.31 1.60 32 I4_SR2 SilentIntronRegion 1 0.00 21.56 10.45 6.52 0.00 0.00 1.37 0.00 15.48 10.25 0.00 0.00 0.00 1.83 12.46 2.85 10.64 9.45 9.21 0.00 1.34 2.03 4.48 33 I4_AR4 ActiveIntronRegion 0 0.00 3.64 1.96 2.44 0.00 0.00 0.23 0.00 8.81 2.83 0.00 0.00 0.00 4.45 2.74 2.41 24.05 6.25 4.28 0.00 1.07 1.01 2.91 34 E5_Ab NovelBoundary 0 0.00 33.48 14.31 10.16 0.00 0.00 0.00 0.00 40.57 26.78 0.00 0.00 0.00 36.32 11.13 49.90 86.11 79.34 43.58 0.00 38.73 63.62 108.24 35 ER5a ExonRegion 1 0.00 36.92 15.18 8.18 0.00 0.00 0.00 0.00 51.11 35.47 0.00 0.00 0.00 80.58 20.98 40.92 147.27 91.82 53.17 0.00 61.36 61.22 109.33 36 ER5b ExonRegion 0 0.00 36.82 25.99 11.17 0.00 0.00 2.22 0.00 62.48 36.13 0.00 0.00 0.00 63.23 32.57 32.49 150.34 142.61 48.82 0.00 79.69 67.39 91.05 37 E5_Ac KnownBoundary 0 0.00 29.80 69.81 45.85 0.00 0.00 5.96 25.34 115.74 105.27 0.00 0.00 0.00 102.24 51.80 41.87 88.36 347.67 54.87 0.00 48.99 70.66 91.85 38 ER5c ExonRegion 0 0.00 34.22 31.62 14.37 0.00 0.00 2.82 0.00 73.35 40.64 0.51 0.00 0.00 76.27 53.51 37.89 183.97 187.90 75.90 0.00 87.39 85.32 96.74 39 E5_Da KnownBoundary 0 3.41 59.46 70.16 76.95 3.65 44.01 20.05 54.05 126.16 160.31 14.37 0.00 0.00 68.93 59.09 53.49 156.99 381.79 132.33 105.91 87.04 98.83 110.20 40 ER5d ExonRegion 0 0.00 36.40 25.03 9.42 0.00 0.00 2.31 0.00 74.05 34.47 0.03 0.00 0.00 76.01 49.50 22.53 166.58 120.06 61.04 0.00 62.61 68.90 59.03 41 E5_Db KnownBoundary 0 0.00 84.33 66.38 87.47 4.33 7.89 15.90 47.52 140.68 159.08 7.63 0.00 0.00 88.41 55.50 13.93 171.29 161.50 78.03 74.08 57.64 110.96 38.50 42 ER5e ExonRegion 0 0.00 45.04 29.34 13.79 0.00 0.00 4.03 0.00 77.09 37.92 0.00 0.00 0.00 83.18 49.38 19.73 164.87 97.40 68.42 0.00 46.37 87.24 68.51 43 E5c_E6a KnownJunction 0 0.00 18.09 21.08 8.09 0.00 0.00 2.25 0.00 40.86 25.63 0.00 0.00 0.00 38.08 51.67 12.05 74.15 59.53 76.80 0.00 33.73 80.58 50.79 44 E5c_E7a KnownJunction 0 0.00 12.83 0.00 1.96 0.00 0.00 2.12 0.00 27.57 7.47 0.00 0.00 0.00 63.16 18.91 7.69 90.51 21.72 4.80 0.00 0.00 11.45 15.54 45 I5_SR2 SilentIntronRegion 0 0.00 19.55 4.69 5.41 0.00 0.00 1.19 0.01 17.83 10.60 0.00 0.00 0.00 3.42 6.13 2.82 11.22 6.96 6.43 0.00 1.22 1.06 4.29 46 ER6a ExonRegion 0 0.00 30.33 32.86 8.90 0.00 0.00 3.02 0.00 49.45 36.89 0.00 0.00 0.00 54.44 30.85 4.71 97.10 54.05 43.85 0.00 38.53 85.01 45.47 47 E6_Da NovelBoundary 0 0.00 13.42 7.60 1.53 0.00 0.00 3.71 0.00 19.36 9.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 4.42 0.00 0.00 0.00 4.18 48 E6a_E7a KnownJunction 0 0.00 70.38 44.29 10.65 0.00 0.00 5.83 0.00 58.65 36.61 0.00 0.00 0.00 69.40 37.58 10.51 96.03 39.05 37.27 0.00 37.62 89.77 42.60 49 I6 Intron 0 0.00 8.62 5.89 5.20 0.00 0.00 0.33 0.00 18.39 5.97 0.00 0.00 0.00 0.71 4.19 0.74 5.27 3.63 5.45 0.00 0.55 0.62 1.37 50 I6_SR1 SilentIntronRegion 0 0.00 8.63 5.89 5.20 0.00 0.00 0.33 0.00 18.40 5.97 0.00 0.00 0.00 0.71 4.19 0.74 5.27 3.63 5.46 0.00 0.55 0.62 1.37 51 E7_Aa NovelBoundary 0 0.00 3.16 16.56 9.32 0.00 0.00 0.00 0.00 17.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 0.00 0.00 0.00 52 ER7a ExonRegion 0 0.00 47.86 35.86 15.95 0.00 0.00 2.75 0.00 83.24 48.04 0.00 0.00 0.00 85.32 47.24 20.79 178.05 88.58 61.60 0.00 53.15 93.08 58.54 53 E7a_E8a KnownJunction 0 0.00 12.56 14.28 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.00 0.00 0.00 14.24 5.19 0.00 0.00 0.00 8.94 0.00 0.00 3.12 0.00 54 E7a_E9a KnownJunction 0 0.00 0.00 1.80 0.00 0.00 0.00 0.00 0.00 1.53 4.70 0.00 0.00 0.00 9.30 9.52 0.00 13.18 5.84 0.00 0.00 0.00 3.00 0.00 55 E7a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 I7 Intron 0 0.00 6.22 5.46 3.57 0.00 0.00 0.83 0.00 7.36 3.08 0.00 0.00 0.00 3.11 4.19 0.73 13.92 5.41 5.84 0.00 0.63 0.60 1.91 57 I7_SR1 SilentIntronRegion 0 0.00 6.22 5.46 3.57 0.00 0.00 0.83 0.00 7.36 3.08 0.00 0.00 0.00 3.11 4.20 0.73 13.92 5.41 5.84 0.00 0.63 0.60 1.91 58 E8_Aa NovelBoundary 0 0.00 21.44 6.95 3.33 0.00 0.00 8.39 0.00 4.25 2.98 0.00 0.00 0.00 4.59 0.00 3.42 4.77 1.82 8.66 0.00 0.00 2.57 0.00 59 ER8a ExonRegion 0 0.00 12.75 6.40 1.06 0.00 0.00 0.00 0.00 1.80 1.01 0.00 0.00 0.00 5.36 1.86 1.69 4.18 0.00 6.07 0.00 0.00 0.56 0.00 60 ER8b ExonRegion 0 0.00 3.22 1.74 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.00 7.96 0.00 0.00 0.00 0.00 61 I8 Intron 0 0.00 15.32 8.00 5.23 0.00 0.00 1.43 0.00 9.62 8.10 0.00 0.00 0.00 8.63 6.35 2.96 23.23 9.83 7.96 0.00 2.14 2.96 3.83 62 I8_SR1 SilentIntronRegion 0 0.00 10.65 4.28 3.71 0.00 0.00 1.32 0.00 7.48 6.17 0.00 0.00 0.00 8.90 5.54 2.73 22.92 8.86 7.27 0.00 2.15 2.83 3.79 63 I8_AR1 ActiveIntronRegion 0 0.00 9.44 8.66 2.71 0.00 0.00 1.66 0.00 8.77 6.00 0.00 0.00 0.00 5.59 3.80 4.88 16.45 13.57 7.70 0.00 4.50 1.24 3.86 64 I8_SR2 SilentIntronRegion 0 0.00 75.49 42.17 21.82 0.00 0.00 2.61 0.00 33.87 32.54 0.00 0.00 0.00 6.79 12.94 2.94 32.31 15.34 11.01 0.00 0.88 4.31 3.55 65 I8_AR3 ActiveIntronRegion 1 0.00 76.84 69.04 29.88 0.00 0.00 2.64 0.00 40.10 33.95 0.00 0.00 0.00 6.93 23.93 7.20 28.07 26.23 23.89 0.00 0.79 6.88 5.21 66 E9_Aa NovelBoundary 0 0.00 157.93 118.62 38.62 0.00 0.00 0.00 7.06 50.49 38.41 0.00 0.00 0.00 7.06 14.22 4.36 43.10 63.55 28.42 6.26 5.44 14.02 7.68 67 ER9a ExonRegion 0 0.00 83.01 38.46 10.68 0.05 0.02 2.54 1.21 16.27 23.47 0.02 0.00 0.08 16.91 27.76 6.00 37.35 21.06 23.13 1.25 6.00 8.54 4.92 68 E9_Da NovelBoundary 0 0.00 64.92 42.87 19.41 0.00 0.00 9.80 2.34 54.25 33.93 0.00 0.00 0.00 5.36 20.27 3.59 30.39 31.05 21.93 0.00 2.59 5.45 3.41 69 E9a_E10a KnownJunction 0 0.00 0.00 1.12 3.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.12 9.77 8.72 17.77 6.84 0.00 0.00 0.00 2.88 4.18 70 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 I9 Intron 0 0.00 37.92 27.05 14.73 0.00 0.00 1.28 0.00 21.23 17.94 0.00 0.00 0.00 7.48 14.08 2.67 20.52 14.86 11.44 0.00 1.75 3.31 5.37 72 I9_AR1 ActiveIntronRegion 1 0.00 72.88 45.21 14.26 0.00 0.00 0.49 0.00 29.93 25.90 0.00 0.00 0.00 4.27 21.86 2.20 17.08 20.71 22.37 0.00 1.63 6.16 9.77 73 I9_AR4 ActiveIntronRegion 1 0.00 104.36 57.17 31.65 0.00 0.00 1.51 0.00 34.98 31.84 0.00 0.00 0.00 8.86 30.89 2.87 30.57 28.06 14.14 0.00 3.41 2.82 7.37 74 I9_AR5 ActiveIntronRegion 1 0.00 16.43 20.12 11.20 0.00 0.00 1.53 0.00 16.74 12.66 0.00 0.00 0.00 8.58 25.22 5.13 30.50 17.34 9.52 0.00 3.36 3.53 2.04 75 I9_SR2 SilentIntronRegion 0 0.00 28.00 40.44 23.28 0.00 0.00 0.94 0.00 29.77 19.02 0.00 0.00 0.00 5.75 12.33 3.22 22.42 18.36 9.89 0.00 1.38 3.52 4.96 76 I9_AR6 ActiveIntronRegion 0 0.00 20.32 22.67 13.91 0.00 0.00 0.85 0.00 20.56 16.93 0.00 0.00 0.00 8.24 8.21 3.22 16.28 11.52 11.78 0.00 1.52 3.31 4.21 77 I9_SR3 SilentIntronRegion 0 0.00 12.40 7.89 5.29 0.00 0.00 1.90 0.00 10.84 9.09 0.00 0.00 0.00 6.85 6.18 1.51 18.42 8.07 6.56 0.00 0.77 2.67 4.91 78 E10_Aa NovelBoundary 0 30.23 61.77 18.57 27.30 39.73 27.94 33.70 14.42 12.38 20.12 14.64 43.81 51.30 7.42 15.58 41.70 31.98 16.17 29.18 21.67 8.15 2.94 17.76 79 ER10a ExonRegion 0 21.23 44.46 7.70 8.11 14.52 26.05 30.92 3.19 24.36 17.71 6.42 45.81 55.82 39.70 67.66 43.02 34.69 23.32 56.00 47.80 13.91 17.28 32.42 80 E10_Da NovelBoundary 0 21.93 58.61 16.11 28.60 4.24 10.79 30.69 21.44 34.98 24.01 0.00 6.30 6.82 17.19 4.45 29.05 43.85 50.57 33.79 15.34 20.39 2.88 43.88 81 E10a_E11a KnownJunction 0 0.00 2.57 0.00 0.00 0.00 0.00 0.00 0.00 3.12 1.24 0.00 0.00 0.00 0.00 0.00 0.00 11.59 0.00 0.00 0.00 0.00 3.12 0.00 82 ER11a ExonRegion 1 0.00 20.00 5.74 5.17 0.00 0.00 2.27 0.00 47.84 26.95 0.00 0.00 0.00 44.14 12.03 9.44 78.64 91.20 28.57 0.00 52.05 63.07 51.56 83 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 84 ER12a ExonRegion 0 0.00 20.02 7.80 6.52 0.00 0.00 1.15 0.00 43.27 22.99 0.00 0.00 0.00 33.86 11.98 4.70 66.56 76.00 18.21 0.27 45.42 36.16 45.32 85 E12_Da NovelBoundary 0 0.00 2.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.83 4.35 13.55 0.00 3.09 0.00 0.00 86 E12a_E13a KnownJunction 0 0.00 62.88 14.78 19.48 0.00 0.00 2.12 0.00 111.25 29.33 0.00 0.00 0.00 47.09 16.07 14.78 161.66 119.59 26.64 0.00 72.40 82.18 84.68 87 ER13a ExonRegion 0 0.00 70.32 21.41 20.34 0.46 0.06 4.76 0.00 74.44 40.62 0.30 0.00 0.00 40.29 37.22 10.60 87.47 60.82 35.85 4.50 42.63 83.77 55.08 88 E13_Da KnownBoundary 0 0.00 29.99 8.37 9.26 0.00 0.00 5.70 0.00 22.40 21.62 0.00 0.00 0.00 11.65 11.74 0.00 8.13 11.65 7.91 0.00 3.09 13.78 8.02 89 E13_Db KnownBoundary 0 0.00 29.14 18.69 11.32 0.00 0.00 1.81 0.00 28.10 20.28 0.00 0.00 0.00 0.00 5.32 0.00 11.69 1.58 8.85 0.00 0.00 27.43 15.79 90 ER13b ExonRegion 1 0.00 73.21 25.73 25.89 0.00 0.00 10.59 0.00 60.52 45.88 0.00 0.00 0.00 19.49 81.24 0.00 19.81 22.17 15.93 0.00 4.41 60.42 41.11 91 ER13c ExonRegion 1 0.00 62.96 27.64 28.53 0.00 0.00 9.27 0.00 62.18 42.23 0.00 0.00 0.00 11.80 56.70 2.90 24.99 6.97 22.38 0.00 8.62 75.46 34.24 92 E13_Dc KnownBoundary 1 0.00 58.74 10.35 23.21 0.00 0.00 3.84 0.00 55.38 34.38 0.00 0.00 0.00 16.83 85.05 4.36 35.25 4.06 18.54 0.00 5.37 36.99 16.48 93 ER13d ExonRegion 0 0.00 41.11 15.43 20.55 0.00 0.15 3.14 0.48 50.43 23.47 0.00 0.00 0.00 6.18 17.73 1.30 14.39 11.17 14.30 0.23 4.48 35.16 12.97