Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZFY Gene 0 0.09 46.48 12.43 23.51 0.02 0.03 6.01 0.14 28.50 28.21 0.24 0.06 0.43 45.05 24.02 41.67 42.78 25.94 9.68 0.09 25.50 71.44 38.64 2 431102 Transcript 0 0.00 1.78 3.51 0.92 0.00 0.00 0.32 0.34 5.15 4.53 0.06 0.00 0.07 5.18 5.45 5.72 4.08 9.06 3.63 0.00 0.85 0.50 0.94 3 383052 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 155093 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 379183 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 449237 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.00 0.00 5.47 0.00 0.00 0.00 5.72 0.00 0.00 2.35 3.12 0.00 7 469869 Transcript 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 0.00 0.00 0.00 0.00 8 443793 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 478783 Transcript 0 0.92 5.63 2.88 4.01 0.26 0.18 1.71 0.41 3.21 5.81 0.98 0.53 1.23 5.67 2.71 4.73 4.30 4.06 1.38 0.87 1.37 4.88 5.58 10 IG10_AR1 ActiveIntergenicRegion 0 0.00 6.80 13.14 7.52 0.00 0.00 0.39 0.00 10.34 6.07 0.00 0.00 0.00 7.11 11.15 7.43 3.88 0.94 5.15 0.00 0.97 3.37 0.86 11 IG10_SR2 SilentIntergenicRegion 0 0.00 9.07 19.83 7.38 0.00 0.00 0.91 0.00 15.61 8.42 0.00 0.00 0.00 18.16 18.70 8.19 9.95 10.21 12.14 0.00 1.82 2.89 0.00 12 IG10_AR2 ActiveIntergenicRegion 0 0.00 5.84 15.31 4.68 0.00 0.00 0.94 0.00 12.07 7.13 0.00 0.00 0.00 15.38 20.67 13.78 5.01 17.92 10.16 0.00 0.48 1.47 1.05 13 ER1a ExonRegion 0 0.00 3.57 7.02 1.83 0.00 0.00 0.64 0.67 8.99 7.61 0.12 0.00 0.13 10.36 10.89 11.44 8.15 18.12 7.26 0.00 1.69 1.01 1.88 14 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1b ExonRegion 0 0.00 4.63 4.90 1.42 0.00 0.00 1.88 1.53 2.30 3.71 0.45 0.00 1.02 10.07 8.88 11.02 11.48 11.78 3.51 0.00 7.91 6.38 13.46 16 E1_Da NovelBoundary 0 0.00 6.71 3.02 1.93 0.00 0.00 0.00 0.00 0.00 1.40 0.00 0.00 0.00 20.60 0.00 8.37 0.00 28.31 9.04 0.00 7.85 0.00 12.21 17 E1a_E3a KnownJunction 0 0.00 6.31 1.74 0.00 0.00 0.00 2.25 0.00 4.69 1.67 0.00 0.00 0.00 4.94 0.00 11.96 16.74 4.15 0.00 0.00 5.93 0.00 8.19 18 ER2a ExonRegion 0 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 1.15 2.90 3.96 1.79 0.92 3.72 0.00 0.00 0.00 0.49 19 ER2b ExonRegion 0 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.29 0.00 0.00 0.00 3.25 5.80 5.94 3.30 1.85 6.37 0.00 1.76 0.00 2.94 20 ER2c ExonRegion 0 0.00 2.50 4.99 2.30 0.00 0.00 0.51 0.00 2.24 7.65 0.00 0.00 0.00 22.60 7.51 13.95 14.77 12.75 4.45 0.00 11.17 10.96 11.42 21 E2_Da NovelBoundary 0 0.00 2.96 14.40 2.00 0.00 0.00 0.00 0.00 6.05 5.72 0.00 0.00 0.00 4.94 10.88 12.99 9.54 17.45 47.06 0.00 5.13 3.12 3.76 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.43 0.00 0.00 0.00 0.00 2.43 0.00 0.00 0.00 0.00 11.18 0.00 27.26 21.79 6.43 0.00 0.00 20.08 32.45 24.58 23 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.00 0.00 5.47 0.00 0.00 0.00 5.72 0.00 0.00 2.35 3.12 0.00 24 E2a_E5a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 0.00 0.00 0.00 0.00 25 I2_AR2 ActiveIntronRegion 0 0.00 18.56 5.22 6.51 0.00 0.00 1.02 0.00 9.53 2.51 0.00 0.00 0.00 1.01 4.23 3.50 3.64 2.49 2.46 0.00 0.62 0.00 6.24 26 ER3a ExonRegion 1 0.00 17.66 2.96 4.13 0.00 0.00 1.83 0.00 13.50 8.70 0.00 0.00 0.00 32.48 5.51 27.35 55.67 8.41 6.05 0.00 30.11 29.24 32.47 27 E3a_E4a KnownJunction 1 0.00 2.70 1.83 3.16 0.00 0.00 0.00 0.00 11.92 9.03 0.00 0.00 0.00 49.15 6.18 20.25 73.31 11.11 9.22 0.00 22.36 22.72 32.44 28 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER4a ExonRegion 1 0.00 11.43 9.74 13.19 0.00 0.00 3.42 0.00 12.56 15.85 0.00 0.00 0.00 52.67 9.40 40.73 75.21 26.96 5.38 0.00 27.89 53.63 49.10 30 E4_Da KnownBoundary 1 17.71 31.24 27.62 51.68 12.65 7.95 8.39 16.35 47.45 36.67 15.06 0.00 0.00 71.11 4.45 55.80 123.80 63.71 13.65 21.80 45.59 68.40 51.73 31 ER4b ExonRegion 1 0.00 15.57 7.60 13.11 0.00 0.00 5.09 0.00 15.43 15.94 0.00 0.00 0.00 69.40 12.30 54.60 74.73 45.17 12.13 0.00 46.96 59.05 53.37 32 E4b_E5a KnownJunction 1 0.00 15.06 1.36 13.92 0.00 0.00 0.00 0.00 11.26 16.20 0.00 0.00 0.00 70.16 0.00 77.67 105.66 41.66 13.84 0.00 41.08 67.79 32.69 33 E5_Aa NovelBoundary 0 0.00 21.71 10.11 1.47 0.00 0.00 1.94 0.00 10.94 8.46 0.00 0.00 0.00 5.06 4.45 8.20 15.05 9.24 4.80 0.00 12.79 23.88 14.68 34 ER5a ExonRegion 1 0.00 27.53 9.12 13.93 0.00 0.00 2.48 0.00 24.83 23.14 0.00 0.00 7.00 70.06 12.26 75.41 87.50 49.61 17.07 0.00 53.23 67.48 43.81 35 E5a_E6a KnownJunction 0 0.00 8.95 4.82 7.36 0.00 0.00 4.15 0.00 14.26 21.14 0.00 0.00 0.00 14.13 5.56 22.05 39.18 31.84 0.00 0.00 28.66 30.25 20.06 36 ER6a ExonRegion 1 0.00 34.19 11.90 10.66 0.00 0.00 6.02 0.00 33.45 33.39 0.00 0.00 0.13 74.28 10.11 73.46 80.87 62.43 13.36 0.00 44.78 80.95 57.88 37 E6_Da NovelBoundary 0 0.00 9.08 8.52 6.83 0.00 0.00 3.44 0.00 6.51 2.93 0.00 0.00 0.00 0.00 4.45 3.67 0.00 5.14 9.41 0.00 3.03 0.00 15.37 38 E6a_E7a KnownJunction 1 0.00 43.41 8.37 14.82 0.00 0.00 1.90 0.00 27.20 23.61 0.00 0.00 0.00 76.58 13.35 80.75 70.03 67.90 12.52 0.00 70.06 78.50 54.46 39 E6a_E8b KnownJunction 0 0.00 6.64 0.00 1.93 0.00 0.00 0.00 0.00 1.68 0.00 0.00 0.00 0.00 9.54 0.00 8.72 14.31 7.17 0.00 0.00 0.00 0.00 0.00 40 ER7a ExonRegion 1 0.00 33.27 8.41 15.09 0.00 0.00 2.43 0.00 29.54 28.97 0.00 0.00 0.00 65.97 12.17 59.46 69.73 58.81 17.40 0.00 64.63 73.41 59.19 41 E7a_E8b KnownJunction 0 0.00 21.31 1.77 12.45 0.00 0.00 6.45 0.00 26.62 21.44 0.00 0.00 0.00 37.14 4.45 68.19 21.88 44.44 0.00 0.00 61.47 62.95 40.72 42 ER8a ExonRegion 0 0.92 5.63 2.88 4.01 0.26 0.18 1.71 0.41 3.21 5.81 0.98 0.53 1.23 5.67 2.71 4.73 4.30 4.06 1.38 0.87 1.37 4.88 5.58 43 E8_Ab KnownBoundary 0 0.00 6.18 4.44 3.23 0.00 0.00 0.00 0.00 2.84 3.09 0.00 0.00 0.00 19.78 0.00 0.00 4.02 0.00 0.00 0.00 2.66 0.00 4.35 44 ER8b ExonRegion 0 2.83 47.26 9.77 22.78 0.92 0.63 5.48 1.93 40.73 32.81 4.17 1.03 2.49 70.94 18.02 82.40 68.56 80.55 15.22 1.94 82.59 83.41 72.82 45 E8_Da NovelBoundary 1 9.56 66.76 7.51 27.34 10.95 14.31 25.39 11.21 28.91 32.15 40.69 72.17 46.59 109.19 15.33 99.97 108.74 82.12 22.59 33.94 81.48 154.37 106.70 46 E8b_E9a KnownJunction 0 0.00 17.43 8.25 20.14 0.00 0.00 4.50 0.00 24.13 22.86 0.00 0.00 0.00 33.20 9.77 56.22 62.65 48.71 21.27 0.00 28.36 75.01 45.33 47 ER8c ExonRegion 1 0.00 44.14 6.13 24.73 0.00 0.00 12.50 1.73 28.68 25.83 3.22 0.00 0.00 66.83 7.31 83.44 96.83 80.41 23.24 0.71 62.44 134.04 73.20 48 ER9a ExonRegion 1 0.20 47.55 9.73 22.10 0.00 0.17 8.70 0.15 39.76 31.45 0.93 0.34 1.09 76.02 17.90 80.25 89.80 62.23 20.22 0.37 61.26 85.43 82.71 49 E9_Da KnownBoundary 1 3.78 52.10 51.51 61.86 12.99 5.79 26.85 75.37 80.93 83.70 64.44 30.61 8.28 71.81 27.57 216.01 87.61 208.59 31.91 45.64 70.92 206.30 152.80 50 ER9b ExonRegion 0 0.00 65.85 16.29 33.00 0.00 0.00 7.52 0.00 35.14 35.77 0.03 0.00 0.06 40.11 34.11 36.04 30.14 14.60 8.08 0.00 15.05 87.97 32.91 51 ER9c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00