Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-954J6.1 Gene 0 2.38 2.22 5.51 3.56 1.73 1.68 1.93 1.26 1.77 1.08 1.13 1.79 1.30 1.14 0.89 2.07 1.04 2.37 0.45 3.46 1.57 1.91 1.81 2 422523 Transcript 0 4.67 4.36 9.54 7.30 3.70 3.72 3.70 2.23 3.26 1.56 1.73 3.24 2.72 1.79 1.50 3.41 1.60 4.11 0.73 5.88 3.25 3.66 3.04 3 433624 Transcript 0 0.00 0.27 0.21 0.47 0.00 0.74 0.00 0.30 1.32 0.20 0.34 1.47 0.00 0.92 0.00 0.52 1.14 0.75 1.01 0.94 0.00 0.00 0.94 4 452506 Transcript 0 0.00 0.00 0.98 0.36 0.00 0.00 0.71 0.92 0.00 0.28 0.34 0.64 0.00 0.00 0.37 1.59 0.59 0.00 0.00 1.14 0.39 0.00 0.00 5 ER1a ExonRegion 0 2.39 2.79 6.64 5.45 2.15 5.24 3.65 1.15 3.69 0.92 1.39 1.64 1.72 1.98 1.06 3.27 1.47 5.37 0.85 4.55 3.47 2.78 2.96 6 E1_Ab KnownBoundary 0 3.70 8.29 5.29 2.56 0.00 0.00 4.28 0.00 5.79 0.00 0.00 0.00 0.00 9.48 4.94 3.42 0.00 8.50 0.00 6.20 3.09 0.00 7.00 7 ER1b ExonRegion 0 2.12 2.08 11.43 2.08 0.35 1.21 2.85 1.11 3.13 3.23 3.17 1.18 0.64 3.24 1.89 4.26 2.03 6.87 0.00 6.71 1.63 2.89 4.25 8 E1_Da KnownBoundary 0 3.19 3.35 6.71 7.09 3.57 0.00 4.28 6.86 4.83 1.67 0.00 0.00 0.00 4.94 5.81 0.00 7.11 3.69 0.00 6.52 2.35 5.82 8.71 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1c ExonRegion 0 6.96 5.94 12.44 9.16 5.25 2.19 3.75 3.30 2.83 2.21 2.07 4.84 3.71 1.60 1.95 3.55 1.72 2.85 0.60 7.22 3.03 4.54 3.13 11 E1_Db NovelBoundary 0 10.45 0.00 11.56 11.15 7.64 0.00 4.33 0.00 4.48 0.00 0.00 0.00 0.00 2.41 9.77 0.00 0.00 1.91 0.00 2.94 2.59 6.31 0.00 12 I1 Intron 0 13.89 4.44 16.63 7.40 7.80 0.67 3.86 0.00 2.68 3.11 2.11 9.09 0.00 3.03 1.49 4.33 2.40 1.35 2.32 3.88 2.41 3.04 7.49 13 I1_SR1 SilentIntronRegion 0 13.99 4.48 16.75 7.45 7.85 0.67 3.88 0.00 2.70 3.14 2.13 9.16 0.00 3.04 1.50 4.36 2.42 1.36 2.34 3.90 2.43 3.06 7.54 14 ER2a ExonRegion 0 0.00 1.65 0.02 0.09 0.00 4.45 0.00 0.05 1.47 0.04 0.09 0.14 0.00 2.29 0.00 0.14 0.26 1.82 2.73 3.44 0.00 0.00 2.33 15 E2_Da NovelBoundary 0 0.00 9.41 5.77 3.36 7.64 0.00 2.16 0.00 1.48 4.46 0.00 5.85 0.00 10.30 0.00 0.00 0.00 5.06 4.61 8.44 3.15 2.51 0.00 16 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 0.00 17 Ix Intron 0 16.00 11.76 18.35 8.73 9.15 4.81 4.46 5.08 5.31 5.01 3.15 6.93 2.93 5.49 3.06 7.12 3.76 7.85 3.99 10.19 5.24 5.57 6.74 18 Ix_AR1 ActiveIntronRegion 0 14.39 18.44 22.76 13.43 9.60 4.50 4.50 7.30 5.56 7.42 2.56 8.71 0.00 5.08 2.77 7.32 4.36 7.28 2.41 8.44 4.58 9.05 3.33 19 Ix_SR2 SilentIntronRegion 0 26.36 20.50 6.50 4.82 7.93 6.52 6.28 4.58 6.55 5.07 5.73 8.46 4.58 12.80 6.58 8.81 5.87 4.36 5.67 20.19 3.92 4.94 8.71 20 Ix_AR3 ActiveIntronRegion 0 64.98 39.56 74.21 32.99 38.43 18.65 14.70 19.78 20.91 20.85 8.50 16.46 4.60 15.97 10.18 23.42 14.83 27.32 11.75 31.31 18.43 17.58 22.77 21 Ix_SR3 SilentIntronRegion 0 49.89 25.85 40.95 14.28 9.93 11.88 8.17 5.14 6.10 5.66 5.66 13.23 0.00 10.51 6.53 27.59 7.32 8.86 2.84 17.27 9.88 14.70 14.45 22 I2 Intron 0 6.71 8.13 8.40 6.44 2.62 5.40 6.99 3.89 9.58 6.19 6.71 19.48 15.62 12.57 3.49 8.06 8.97 7.63 3.36 22.63 7.64 9.12 7.54 23 I2_SR1 SilentIntronRegion 0 4.52 7.18 3.54 3.72 1.73 4.16 6.12 2.23 6.65 3.67 3.30 17.70 15.05 11.89 0.98 4.65 7.13 8.46 1.70 21.77 7.61 5.63 8.21 24 I2_AR1 ActiveIntronRegion 0 11.82 10.37 19.75 12.78 4.71 8.29 9.05 7.77 16.44 12.08 14.65 23.72 17.00 14.19 9.35 16.05 13.27 5.75 7.25 24.74 7.74 17.26 6.02 25 E3_Aa NovelBoundary 0 27.78 23.88 51.06 24.97 24.36 13.06 25.48 7.23 14.81 21.95 12.42 17.56 34.90 7.42 17.80 24.35 16.83 16.13 16.85 35.41 8.34 3.06 11.95 26 E3_Ab NovelBoundary 0 0.00 0.00 10.17 9.69 0.00 0.00 1.99 4.60 12.27 16.01 2.53 17.86 13.31 2.30 5.56 4.10 9.07 4.39 9.04 5.69 2.66 2.69 4.18 27 ER3a ExonRegion 0 0.00 0.00 1.23 2.73 0.00 0.00 0.00 1.73 3.71 1.15 1.93 8.66 0.00 3.25 0.00 2.97 6.60 0.81 3.19 2.19 0.00 0.00 3.30 28 ER3b ExonRegion 0 0.00 0.00 0.80 1.73 0.00 0.00 0.00 1.10 2.13 0.82 0.47 1.18 0.00 0.22 0.00 0.72 1.65 0.00 0.77 0.58 0.00 0.00 0.76 29 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.00 0.00 0.00 0.00 32 Ix_AR1 ActiveIntronRegion 0 6.38 7.33 4.47 8.31 3.36 0.92 11.24 2.59 2.77 7.53 2.33 7.44 19.64 7.66 4.40 1.48 3.30 0.93 4.00 8.98 1.11 5.76 1.48 33 ER5a ExonRegion 0 0.00 0.00 1.95 0.72 0.00 0.00 1.42 1.84 0.00 0.57 0.69 1.27 0.00 0.00 0.73 3.18 1.18 0.00 0.00 2.28 0.79 0.00 0.00