Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BCAP31 Gene 0 165.00 122.79 471.70 183.41 112.56 139.42 67.55 161.49 165.97 215.09 288.20 89.03 85.39 259.92 400.93 195.34 199.81 238.51 202.78 154.13 228.98 263.34 217.49 2 345046 Transcript 0 288.39 136.41 251.34 104.70 159.66 180.38 84.13 69.69 95.78 135.08 219.38 14.69 17.91 88.89 178.93 160.79 164.31 115.02 182.10 80.43 149.48 215.25 203.85 3 429550 Transcript 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 2.65 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 442093 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 441714 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 426131 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.23 1.55 0.00 0.00 0.00 0.58 0.59 0.00 0.00 0.00 0.00 0.00 0.83 2.74 7 416815 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 370133 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 458587 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 423827 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 430088 Transcript 0 5.65 3.20 14.35 3.25 3.34 4.39 2.09 1.48 3.66 5.64 7.25 2.16 0.84 3.94 9.71 8.70 6.25 2.71 5.97 4.39 5.43 9.34 8.60 12 468947 Transcript 0 2.99 1.69 9.18 6.76 2.46 1.44 3.43 4.24 4.48 6.62 6.33 3.75 3.23 5.34 8.59 6.90 5.31 4.30 9.38 5.18 3.78 7.52 5.23 13 477175 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.91 0.00 0.00 0.00 1.14 0.74 0.00 0.00 0.00 0.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 0.00 0.00 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER1b ExonRegion 0 0.00 3.62 0.75 0.00 3.50 2.07 0.93 0.75 0.00 1.50 1.39 0.00 0.06 1.12 0.41 0.00 0.00 1.73 0.00 0.00 0.17 0.16 0.00 17 E1_Da KnownBoundary 0 0.00 2.70 1.74 0.00 0.00 0.00 0.00 0.00 0.00 4.84 0.00 0.00 0.00 4.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E1a_E3b KnownJunction 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 2.65 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER1c ExonRegion 0 19.84 21.47 18.09 5.64 15.64 30.70 14.45 2.74 7.68 14.50 27.34 2.21 2.75 14.68 54.40 18.12 24.22 5.79 29.86 7.04 28.65 22.82 15.98 20 E1_Ac KnownBoundary 1 210.48 192.33 175.81 73.85 149.07 272.74 120.83 60.54 80.21 138.53 214.16 19.96 12.34 64.45 121.64 196.53 200.93 141.69 262.97 112.43 197.07 160.80 157.49 21 ER1d ExonRegion 1 431.86 318.36 397.30 135.51 258.13 402.43 208.35 85.79 142.72 217.54 382.00 46.39 66.81 162.54 465.03 303.76 410.86 162.56 428.59 115.46 399.37 536.36 309.85 22 E1_Db KnownBoundary 0 34.60 9.41 6.53 4.63 0.00 10.28 4.46 0.00 5.03 2.90 15.58 0.00 0.00 11.83 4.45 8.63 8.42 3.90 16.85 3.26 0.00 5.82 7.94 23 E1b_E3b KnownJunction 1 845.34 387.76 735.93 308.45 463.33 509.54 237.95 206.31 279.66 389.61 630.05 41.86 50.97 251.99 481.61 464.24 468.72 339.25 516.44 234.26 419.78 622.93 595.58 24 ER1e ExonRegion 0 6.76 3.99 2.68 2.64 2.01 8.12 1.75 0.99 1.69 6.24 14.21 0.03 0.11 7.00 5.96 4.67 6.23 6.96 10.73 2.19 2.14 7.47 2.83 25 E1c_E3b KnownJunction 0 6.96 3.35 5.56 5.23 0.00 2.90 1.72 4.11 4.83 5.32 16.16 0.00 0.00 15.01 0.00 3.33 4.77 3.90 0.00 5.75 3.15 5.82 0.00 26 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.23 1.55 0.00 0.00 0.00 0.58 0.59 0.00 0.00 0.00 0.00 0.00 0.83 2.74 27 E2_Ac KnownBoundary 0 10.08 0.00 1.42 0.00 0.00 0.00 0.00 0.00 1.53 3.06 6.74 0.00 0.00 0.00 10.75 12.48 4.49 1.82 0.00 0.00 10.75 17.02 15.71 28 ER2b ExonRegion 0 1.56 0.00 1.16 0.65 0.00 0.00 0.00 0.00 1.24 1.15 4.17 0.00 0.00 0.00 8.09 7.35 0.00 0.00 0.00 0.00 8.12 10.97 7.73 29 ER2c ExonRegion 0 5.12 3.17 8.48 2.32 2.19 4.44 0.29 1.49 3.29 3.14 18.13 0.00 0.00 17.18 29.24 19.91 26.74 4.88 8.28 6.04 27.99 16.63 11.69 30 E2_Ad KnownBoundary 0 3.78 5.79 12.15 3.66 3.57 13.97 3.93 2.55 1.79 4.81 25.59 0.00 0.00 34.73 32.76 22.90 50.86 9.37 8.94 15.85 30.95 16.90 7.94 31 E2_Da KnownBoundary 0 2.89 0.00 8.54 0.00 4.33 7.78 4.15 0.00 3.36 4.38 2.16 0.00 0.00 14.95 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 32 E2a_E3b KnownJunction 0 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 0.00 0.00 0.00 3.42 0.00 0.00 0.00 0.00 2.47 0.00 0.00 33 ER2d ExonRegion 0 4.84 1.74 11.90 2.19 3.15 12.90 1.32 1.73 3.88 5.37 16.29 0.00 0.00 21.40 12.74 11.46 22.99 6.34 7.17 8.28 14.72 7.89 7.24 34 ER2e ExonRegion 0 3.44 2.03 6.47 1.32 1.49 2.74 0.26 1.19 3.14 3.44 7.83 0.00 0.00 6.58 2.52 5.12 4.60 1.54 3.45 0.14 4.30 0.61 1.68 35 E2_Db KnownBoundary 0 2.96 6.51 8.22 1.60 0.00 0.00 0.00 4.07 4.72 3.95 4.47 10.50 0.00 4.94 4.82 7.95 8.42 0.00 9.41 0.00 12.11 2.57 3.50 36 E2b_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER2f ExonRegion 0 5.31 2.78 11.29 2.04 3.16 4.43 1.81 4.67 9.31 5.34 19.16 2.44 1.29 23.65 29.95 11.84 16.77 7.25 6.21 4.92 20.89 28.60 17.30 38 E2c_E3b KnownJunction 0 18.37 0.00 26.91 6.19 11.46 5.17 0.00 14.54 12.21 12.92 26.53 0.00 0.00 27.37 41.41 8.72 16.46 16.04 13.37 8.69 51.15 45.37 30.39 39 ER3a ExonRegion 0 5.65 3.20 14.35 3.25 3.34 4.39 2.09 1.48 3.66 5.64 7.25 2.16 0.84 3.94 9.71 8.70 6.25 2.71 5.97 4.39 5.43 9.34 8.60 40 E3_Ab KnownBoundary 0 0.00 0.00 17.98 4.59 0.00 0.00 0.00 0.00 1.33 3.92 4.79 0.00 0.00 0.00 8.90 7.78 0.00 0.00 0.00 3.26 0.00 11.82 0.00 41 ER3b ExonRegion 1 192.01 121.23 665.23 231.73 128.40 153.48 74.12 224.98 262.62 355.75 697.10 167.95 160.75 292.11 355.07 240.79 503.96 289.11 358.22 240.00 479.56 341.06 292.40 42 E3a_E4b KnownJunction 0 160.25 135.17 1265.42 480.76 98.90 143.89 59.84 438.63 424.91 674.77 1040.11 198.96 201.12 691.63 971.14 663.33 731.56 654.47 1168.41 546.49 659.66 862.90 803.35 43 ER4a ExonRegion 0 2.99 1.69 9.18 6.76 2.46 1.44 3.43 4.24 4.48 6.62 6.33 3.75 3.23 5.34 8.59 6.90 5.31 4.30 9.38 5.18 3.78 7.52 5.23 44 E4_Ab KnownBoundary 0 7.56 0.00 9.76 3.36 4.33 2.84 2.25 4.60 5.03 5.53 0.00 7.20 0.00 2.12 4.45 0.00 0.00 2.11 14.40 0.00 0.00 5.69 3.93 45 ER4b ExonRegion 0 186.03 155.52 1031.94 468.26 169.35 168.25 81.62 385.81 428.03 520.08 608.89 220.29 176.18 572.91 947.22 855.85 432.85 833.16 925.89 426.20 467.59 972.56 931.96 46 E4a_E5a KnownJunction 0 227.15 217.20 961.41 382.44 522.67 504.08 164.42 292.57 316.72 363.79 450.59 180.51 168.82 424.34 624.27 270.19 356.43 481.32 297.33 293.19 336.50 358.77 320.20 47 ER4c ExonRegion 0 187.22 189.89 954.05 406.37 352.53 373.03 126.00 317.96 350.88 375.42 494.82 173.90 164.74 440.47 610.11 438.14 361.45 647.48 397.51 312.94 375.27 462.80 506.20 48 ER5a ExonRegion 0 335.72 433.15 1028.36 378.79 457.44 678.28 317.86 328.59 401.61 449.47 693.11 261.35 194.39 582.03 703.66 339.04 436.71 459.22 362.10 334.11 557.86 535.02 395.90 49 E5_Da NovelBoundary 0 1162.87 620.35 1055.82 440.07 358.91 367.63 235.39 373.90 408.27 445.75 580.30 268.59 157.94 614.28 903.02 441.51 493.41 476.22 485.38 371.17 520.04 676.63 395.66 50 E5b_E6a KnownJunction 0 1321.27 525.43 1320.89 453.72 368.93 304.77 204.96 440.31 402.89 470.33 647.69 256.58 196.09 686.98 933.56 495.51 482.19 563.06 525.19 389.77 606.84 550.80 499.03 51 ER5b ExonRegion 0 961.58 500.83 1196.75 429.74 319.06 321.35 182.23 403.21 410.16 475.28 651.23 252.84 182.16 678.30 903.57 481.72 488.40 575.54 498.70 386.55 588.13 628.89 444.49 52 ER6a ExonRegion 0 653.00 303.72 1197.39 376.97 216.88 303.10 130.39 362.60 345.01 478.35 674.32 213.67 212.51 700.98 848.77 391.80 376.79 529.78 387.41 336.77 577.67 496.78 481.17 53 E6_Da KnownBoundary 0 850.52 290.08 1283.57 433.71 338.37 463.43 208.67 421.13 398.72 529.83 705.39 324.86 251.61 814.41 935.66 485.34 498.55 599.58 466.46 339.59 602.64 582.09 584.74 54 ER6b ExonRegion 0 627.55 327.14 1305.67 445.82 284.58 336.38 172.99 433.15 400.75 515.52 655.69 279.18 238.96 771.35 878.19 533.11 460.69 730.81 481.09 365.58 563.01 632.58 638.58 55 E6b_E7a KnownJunction 0 724.72 452.62 1490.96 577.42 244.57 430.21 211.58 533.72 447.30 584.87 640.58 302.05 230.50 645.42 975.22 567.37 472.18 767.80 557.38 400.82 494.03 709.45 668.48 56 ER7a ExonRegion 0 442.46 378.60 1331.72 514.96 222.32 366.73 165.06 461.97 400.50 549.74 738.73 216.62 187.28 623.91 943.56 492.04 444.77 662.55 438.26 345.45 510.80 532.34 504.09 57 E7_Da KnownBoundary 0 288.42 323.17 816.44 300.23 234.04 309.14 140.57 277.33 258.88 371.42 553.14 94.23 113.14 390.49 584.34 375.71 388.22 330.96 323.68 255.54 367.64 298.27 348.20 58 E7_Db KnownBoundary 1 119.43 119.65 273.26 114.07 94.31 125.44 60.37 90.65 88.60 95.92 242.59 38.26 23.38 111.90 221.65 164.83 147.26 162.41 180.99 130.20 135.23 239.18 229.80 59 E7_Dc KnownBoundary 1 59.42 103.07 177.17 84.07 88.79 105.79 49.20 67.57 51.85 68.04 125.35 30.16 0.00 5.95 81.71 112.53 104.63 79.88 152.57 51.96 78.15 155.10 177.98 60 E7_Dd KnownBoundary 0 122.91 153.33 807.01 248.29 181.41 186.20 107.18 256.38 205.76 327.77 366.46 83.88 93.18 236.39 335.50 289.84 225.99 296.27 196.90 167.85 288.50 327.42 210.42 61 E7d_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER7b ExonRegion 0 333.06 389.52 1346.68 505.13 270.01 403.94 196.07 441.38 384.91 539.77 787.39 199.55 210.20 697.93 1039.70 519.31 508.34 669.73 531.38 371.95 497.84 616.72 598.27 63 ER7c ExonRegion 0 305.20 356.83 1410.24 519.71 267.57 382.77 191.09 456.20 400.01 571.01 770.32 198.58 226.37 707.14 1040.20 523.09 466.75 698.08 521.13 369.50 495.83 688.39 612.19 64 ER7d ExonRegion 0 288.69 342.86 1404.77 519.26 307.71 393.53 199.65 462.53 410.31 582.17 744.55 191.36 196.04 714.61 1033.43 517.15 474.01 686.62 499.47 364.25 513.02 723.81 612.00 65 ER7e ExonRegion 0 286.27 355.70 1409.14 507.07 435.46 404.01 226.21 498.83 439.10 591.41 839.04 160.07 212.66 745.19 1062.52 565.30 514.94 692.17 484.54 393.98 584.30 721.08 616.53 66 E7e_E8a KnownJunction 1 410.29 426.11 1626.17 540.82 629.46 465.07 253.18 585.47 520.19 684.90 948.66 130.99 265.73 773.74 1211.45 634.19 582.33 638.92 512.67 464.42 630.93 735.60 720.55 67 ER8a ExonRegion 0 342.37 344.58 1626.88 633.11 306.92 343.61 172.61 547.70 518.77 697.41 764.05 233.49 237.98 730.52 1193.31 598.96 544.97 764.07 617.46 465.05 537.75 765.17 659.61 68 E8a_E9a KnownJunction 0 471.71 327.84 1585.84 673.57 352.38 375.81 156.69 511.25 467.79 647.80 586.25 244.73 224.66 702.22 1422.09 445.18 450.96 705.04 580.82 398.59 535.98 695.61 545.64 69 ER9a ExonRegion 0 403.42 196.15 1291.41 496.44 231.82 292.55 124.19 440.21 422.58 596.55 686.76 205.58 184.12 703.96 1248.24 519.72 483.38 638.31 490.02 381.72 594.90 816.52 522.01 70 E9_Ab KnownBoundary 0 471.94 228.12 1326.12 515.39 196.26 314.99 139.07 458.30 456.62 605.07 708.44 212.17 312.80 618.23 1251.25 426.13 498.36 688.83 388.25 446.85 683.13 778.34 508.25 71 ER9b ExonRegion 0 253.17 167.41 679.28 303.12 147.39 150.63 78.72 254.72 260.62 339.46 395.47 131.67 149.86 429.19 788.34 258.84 280.96 339.06 261.28 263.68 340.82 372.78 288.72 72 ER9c ExonRegion 0 10.58 8.13 12.25 7.50 4.01 7.34 3.97 12.10 3.71 5.73 10.63 4.33 9.38 17.05 37.72 17.83 1.65 12.93 3.19 5.32 1.10 2.08 10.28 73 ER9d ExonRegion 0 0.00 1.22 1.72 1.91 0.00 1.10 0.79 6.22 0.99 1.61 0.39 1.73 0.00 1.30 3.48 3.57 0.00 2.59 0.00 0.85 0.00 0.00 0.00