Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	FUNDC2	Gene	0	40.98	59.18	79.79	51.29	34.12	43.49	26.88	28.09	24.99	42.73	79.19	25.96	23.48	46.25	67.91	58.24	44.35	43.05	37.65	29.85	26.12	44.62	32.84
2	475165	Transcript	0	1.48	1.16	1.13	0.04	1.82	7.33	3.20	0.20	0.41	0.16	1.02	0.53	0.92	1.47	4.37	1.18	2.60	1.09	2.17	2.92	0.79	0.64	3.56
3	369498	Transcript	0	8.99	16.54	16.52	9.74	9.18	29.01	12.89	5.80	6.37	9.51	10.86	2.32	2.79	5.90	10.14	9.57	9.73	11.34	12.29	9.54	8.09	8.25	10.85
4	327891	Transcript	0	0.00	0.00	311.82	244.69	0.00	0.00	0.00	71.14	47.45	177.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	147.86	0.00	0.00	0.00	0.00	0.00
5	484175	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	355488	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	485289	Transcript	0	8.62	17.43	4.71	7.36	5.39	4.29	5.95	6.73	3.74	3.11	8.01	5.37	6.93	7.09	9.66	10.83	13.75	3.10	8.96	7.61	5.27	3.06	5.61
8	456179	Transcript	0	0.00	0.00	1.83	0.00	0.00	2.56	0.00	0.00	0.00	1.67	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	471528	Transcript	0	0.34	8.14	3.23	5.63	2.18	6.99	3.27	4.20	3.33	3.07	5.35	3.44	8.59	2.14	0.67	5.37	4.66	6.85	1.61	7.44	4.85	9.13	4.78
10	492303	Transcript	0	5.00	8.21	7.57	7.85	7.15	5.50	5.43	4.26	5.21	4.64	5.85	7.31	10.29	4.36	2.75	6.22	3.09	3.76	1.88	3.42	1.78	8.74	2.51
11	ER1a	ExonRegion	0	5.65	4.22	1.92	0.00	7.14	8.87	9.85	0.74	1.64	0.51	1.20	2.11	3.68	5.72	9.72	4.41	7.81	0.82	8.46	7.67	1.31	2.47	8.74
12	E1a_E2a	KnownJunction	0	0.00	0.00	1.83	0.00	0.00	10.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00	2.43	0.00	0.00	0.00
13	ER2a	ExonRegion	0	0.27	0.44	0.79	0.18	0.15	7.62	0.72	0.05	0.00	0.11	2.87	0.00	0.00	0.16	1.57	0.30	2.59	1.43	0.23	1.58	1.86	0.09	1.93
14	E2a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.56	2.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.59
15	ER3a	ExonRegion	0	14.42	22.88	19.67	6.26	9.32	48.66	18.60	4.20	4.21	10.46	18.68	0.00	0.61	8.52	16.86	15.44	15.90	16.68	19.66	12.41	13.23	10.37	16.55
16	E3_Ab	KnownBoundary	1	71.94	114.98	41.75	33.90	20.03	108.23	29.06	19.80	11.81	32.77	45.96	0.00	6.17	12.36	80.47	58.53	34.03	46.30	38.02	23.97	23.54	18.86	87.84
17	ER3b	ExonRegion	1	258.79	384.25	209.48	142.14	124.06	265.21	129.20	73.34	57.27	140.69	313.52	7.74	2.38	213.83	273.97	264.65	226.14	198.63	169.98	106.83	123.46	119.94	171.53
18	E3a_E5b	KnownJunction	1	1098.49	949.04	321.87	182.06	355.77	521.46	357.32	129.67	129.69	260.48	845.95	38.41	37.66	669.67	601.89	651.71	470.03	367.36	218.83	238.54	289.49	211.32	307.99
19	ER4a	ExonRegion	0	0.66	1.53	2.38	0.98	0.07	1.35	0.41	1.22	2.39	1.68	1.61	0.00	0.00	1.28	4.50	1.27	1.98	2.81	0.06	0.53	0.06	0.04	4.16
20	E4a_E5b	KnownJunction	0	0.00	0.00	2.96	0.00	0.00	0.00	1.72	0.00	1.79	2.34	2.26	0.00	0.00	0.00	0.00	4.36	4.77	0.00	0.00	0.00	0.00	0.00	0.00
21	E5_Aa	NovelBoundary	1	855.26	610.22	339.58	260.31	472.16	350.65	694.28	263.57	212.58	242.89	236.95	315.40	375.14	292.72	233.14	422.80	504.91	357.95	458.93	563.94	369.80	183.82	498.95
22	ER5a	ExonRegion	0	17.24	19.61	4.59	4.03	10.78	8.58	11.91	4.38	1.06	4.56	8.12	10.75	13.86	11.29	19.33	18.34	13.75	4.50	9.08	15.22	7.94	6.13	11.22
23	E5_Ab	KnownBoundary	0	13.85	6.05	7.33	1.70	8.66	0.00	1.85	12.03	0.00	0.00	2.68	0.00	0.00	0.00	6.06	6.66	4.49	1.58	0.00	0.00	0.00	0.00	0.00
24	E5_Ac	KnownBoundary	1	1260.67	1210.24	438.01	266.90	647.28	531.28	500.41	193.46	188.54	285.57	1030.95	43.21	26.13	290.42	510.54	798.08	672.09	432.52	245.75	325.79	447.21	289.57	447.39
25	ER5b	ExonRegion	1	1023.01	1020.15	454.67	266.24	483.38	536.51	400.41	200.80	171.84	296.90	1044.86	30.12	16.72	545.77	603.21	764.61	614.54	454.31	257.04	294.73	410.27	258.99	409.73
26	ER5c	ExonRegion	1	443.75	544.95	578.29	367.02	268.18	294.78	216.71	211.03	169.38	334.37	645.02	93.28	56.81	191.46	354.94	404.61	421.54	434.60	305.72	231.00	281.62	288.90	305.01
27	E5_Da	KnownBoundary	1	49.34	131.23	189.73	127.09	41.34	70.30	49.73	64.53	41.23	103.31	147.56	24.31	0.00	43.26	109.90	65.88	99.49	93.23	182.31	70.12	60.73	172.80	85.96
28	E5a_E5d	KnownJunction	0	0.00	0.00	311.82	244.69	0.00	0.00	0.00	71.14	47.45	177.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	147.86	0.00	0.00	0.00	0.00	0.00
29	E5_Ad	KnownBoundary	1	59.64	115.57	258.18	194.28	41.17	115.27	48.09	54.79	42.68	130.17	183.10	6.15	13.47	53.45	117.68	118.35	88.83	165.27	101.84	87.63	65.11	132.39	94.24
30	ER5d	ExonRegion	1	83.39	238.74	671.26	397.14	84.55	225.92	100.09	182.87	136.85	297.28	405.91	79.66	51.59	173.13	445.63	260.36	266.05	368.07	392.44	181.70	153.82	343.78	236.69
31	ER5e	ExonRegion	1	193.23	351.26	728.04	424.50	122.91	279.54	132.50	185.85	152.03	303.64	844.65	73.27	85.80	341.94	516.27	377.00	449.77	301.94	240.99	220.24	278.91	269.68	262.90
32	E5b_E6a	KnownJunction	1	464.53	478.99	990.92	527.01	150.68	292.90	143.75	257.16	235.39	389.71	990.57	169.86	112.65	655.49	709.32	380.84	561.10	295.73	162.26	319.20	356.70	234.89	171.84
33	E5b_E8b	KnownJunction	0	0.00	15.26	4.82	10.69	0.00	0.00	0.00	9.08	6.42	1.67	7.90	0.00	0.00	2.88	0.00	3.33	13.74	1.70	8.85	0.00	2.59	0.00	0.00
34	ER6a	ExonRegion	1	407.26	463.52	932.68	534.23	201.63	372.31	210.35	274.64	217.51	415.10	797.19	159.45	71.58	683.28	821.09	737.40	448.75	446.11	276.79	323.80	313.83	433.34	385.20
35	E6a_E7b	KnownJunction	0	0.00	0.00	1.83	0.00	0.00	2.56	0.00	0.00	0.00	1.67	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	E6a_E8b	KnownJunction	0	674.49	724.08	1068.62	596.36	397.54	519.47	309.76	304.77	227.43	441.91	825.58	133.69	140.58	372.18	598.18	596.51	460.40	490.85	318.22	307.44	300.42	395.45	352.29
37	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	9.32	3.82	7.27	1.77	1.56	1.16	5.64	7.53	11.70	20.13	4.71	0.00	8.72	3.74	12.89	0.00	9.33	6.05	8.88	11.10
38	ER7a	ExonRegion	0	0.34	8.14	3.23	5.63	2.18	6.99	3.27	4.20	3.33	3.07	5.35	3.44	8.59	2.14	0.67	5.37	4.66	6.85	1.61	7.44	4.85	9.13	4.78
39	E7a_E8b	KnownJunction	0	0.00	0.00	2.75	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.71	0.00	3.93	0.00	0.00	4.80	0.00	0.00	0.00	0.00
40	ER7b	ExonRegion	0	0.77	3.14	3.17	1.42	0.00	4.08	2.77	0.16	4.44	1.30	0.53	0.79	0.43	4.95	1.19	4.46	2.85	3.02	3.19	2.80	2.40	5.68	0.13
41	E8_Aa	NovelBoundary	1	3.56	3.35	4.32	7.76	3.57	14.25	1.94	14.25	7.90	4.94	6.90	24.76	34.09	7.00	4.45	0.00	3.74	7.46	0.00	3.20	0.00	11.02	8.71
42	ER8a	ExonRegion	0	5.00	8.21	7.57	7.85	7.15	5.50	5.43	4.26	5.21	4.64	5.85	7.31	10.29	4.36	2.75	6.22	3.09	3.76	1.88	3.42	1.78	8.74	2.51
43	E8_Ab	KnownBoundary	0	50.16	0.00	20.58	12.75	17.06	16.47	13.82	9.28	1.79	1.16	12.48	7.65	27.11	4.94	4.45	8.63	8.51	2.07	0.00	3.26	3.03	8.02	4.27
44	ER8b	ExonRegion	0	621.51	745.25	1022.45	584.49	469.01	661.45	353.59	290.53	224.05	447.41	946.78	187.76	164.48	437.69	704.14	489.62	470.70	498.86	331.11	288.35	287.60	416.05	290.62
45	E8_Da	KnownBoundary	1	367.40	454.26	536.53	313.05	238.54	389.26	234.90	146.55	116.14	225.21	404.94	49.52	47.89	146.63	284.94	311.11	199.35	214.77	223.44	153.40	149.38	234.40	169.53
46	E8_Db	KnownBoundary	1	162.25	521.75	401.11	293.10	295.93	518.85	393.18	135.79	120.28	184.57	506.44	36.76	40.91	154.98	286.67	296.08	210.85	242.88	361.99	147.46	144.44	261.47	172.09
47	ER8c	ExonRegion	1	422.03	881.35	951.62	610.85	469.86	871.79	569.83	300.41	232.70	437.20	1004.72	137.68	160.40	481.39	811.19	618.20	447.60	514.78	507.75	321.28	286.92	479.63	328.90
48	ER8d	ExonRegion	0	369.68	946.73	907.82	566.25	491.64	751.19	510.80	303.38	242.80	458.84	1029.56	216.54	187.06	526.66	739.23	646.37	496.23	522.81	395.63	320.78	303.92	481.20	348.69
49	E8c_E9a	KnownJunction	1	829.70	1074.55	961.65	564.23	615.70	695.96	315.50	337.46	266.14	509.22	1044.16	124.39	118.01	578.79	806.11	578.05	542.12	438.87	321.52	386.32	304.07	487.36	330.61
50	I8_SR1	SilentIntronRegion	0	12.49	3.03	7.81	7.18	3.86	1.99	5.51	4.16	2.18	1.80	4.33	0.86	2.86	2.70	3.27	1.05	1.59	3.08	1.43	1.25	1.59	3.09	1.38
51	I8_AR2	ActiveIntronRegion	0	12.18	0.40	9.18	5.50	0.00	1.53	3.02	2.44	3.60	2.18	4.40	0.00	4.23	2.26	2.90	2.78	0.00	1.12	4.07	0.45	0.00	2.29	2.94
52	E9_Aa	NovelBoundary	0	14.08	5.66	9.14	18.38	28.95	2.44	8.70	5.79	5.56	7.52	7.11	0.00	6.82	2.30	5.19	3.76	0.00	5.39	0.00	3.26	2.53	0.00	0.00
53	ER9a	ExonRegion	0	641.97	869.09	887.23	541.42	432.77	577.36	231.41	316.94	257.55	497.21	1105.92	177.96	205.13	616.91	783.95	544.37	574.70	540.22	339.33	324.19	310.03	440.50	328.75
54	ER9b	ExonRegion	0	482.07	631.96	958.67	598.03	266.71	341.52	166.84	352.68	284.84	546.03	1173.30	402.45	324.78	654.16	1035.06	1035.44	524.21	799.26	602.13	334.67	290.95	543.80	508.95
55	E9_Db	KnownBoundary	1	494.75	631.01	1104.60	658.69	224.36	301.81	146.13	357.10	285.01	606.41	1150.98	424.19	265.24	865.98	1799.62	1440.39	485.37	853.69	1095.56	382.42	237.23	958.79	681.88
56	ER9c	ExonRegion	0	457.05	477.87	963.94	535.58	305.34	353.25	202.35	282.48	253.09	518.12	1113.40	340.08	263.09	576.03	998.31	801.15	589.22	569.71	589.52	293.58	318.17	536.13	374.05
57	E9_Dc	KnownBoundary	0	320.80	310.60	787.61	490.05	188.54	236.85	145.34	256.06	202.05	392.86	502.18	452.85	226.77	399.85	954.33	437.24	329.78	353.47	211.02	175.01	235.37	279.47	236.03
58	ER9d	ExonRegion	0	174.07	219.07	442.90	263.83	151.28	161.13	84.38	146.02	125.61	209.20	332.41	156.83	125.36	267.46	391.90	246.51	189.17	112.29	154.24	139.27	106.82	255.74	115.49
59	E9_Dd	KnownBoundary	1	3.70	39.60	44.11	65.96	32.68	28.62	28.26	20.13	33.97	42.12	36.54	74.27	74.35	23.72	24.48	25.63	12.62	17.37	25.79	32.79	6.30	54.19	18.35
60	ER9e	ExonRegion	1	16.83	40.13	38.68	40.22	41.79	36.29	28.22	26.03	24.03	33.96	14.77	39.03	31.53	13.59	15.91	15.10	12.05	6.00	14.04	24.96	1.64	36.23	14.64
61	E9_De	KnownBoundary	1	31.56	39.20	64.19	58.00	29.37	32.42	24.51	23.45	44.24	30.68	12.06	32.26	66.55	23.66	13.97	44.26	18.05	4.06	30.21	28.70	2.97	25.41	12.29
62	ER9f	ExonRegion	0	7.20	24.60	19.15	18.02	16.06	10.22	10.42	11.50	11.85	13.73	7.24	15.56	19.54	6.79	6.73	8.70	5.92	6.18	7.37	11.05	3.57	19.28	7.21
63	E9_Df	KnownBoundary	0	9.85	8.62	6.83	6.53	4.33	7.78	14.44	14.75	4.75	5.67	7.05	0.00	0.00	4.89	0.00	18.11	9.35	16.91	4.80	8.95	0.00	3.12	20.23
64	ER9g	ExonRegion	0	3.57	10.20	13.38	13.22	9.04	9.36	7.19	7.39	8.53	8.55	3.05	4.65	4.98	3.28	3.42	3.70	3.56	6.01	4.92	6.67	2.95	6.13	5.15