Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC10A3 Gene 0 10.00 2.57 15.68 6.01 4.05 6.42 4.70 6.46 7.49 14.64 25.20 7.49 7.97 31.13 35.49 26.93 17.90 9.47 5.18 5.48 47.19 25.61 31.05 2 453912 Transcript 0 0.00 0.27 0.00 0.00 3.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.42 0.00 3.53 0.00 1.17 3 393587 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 263512 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 393586 Transcript 0 0.84 0.80 0.76 0.32 0.53 1.81 0.26 0.00 0.73 0.00 1.89 0.70 0.00 2.33 1.74 0.56 0.63 0.00 1.26 0.00 1.26 0.75 3.32 6 369649 Transcript 0 2.95 1.28 0.55 0.00 0.00 0.00 0.00 2.10 0.80 0.83 12.32 0.00 0.00 12.10 4.88 1.97 2.10 1.91 0.00 1.57 2.72 6.86 6.69 7 440701 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.04 0.47 0.00 0.00 0.00 0.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1a ExonRegion 0 0.00 0.27 0.00 0.00 3.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.42 0.00 3.53 0.00 1.17 9 ER1b ExonRegion 0 1.69 2.03 0.00 1.36 5.35 7.34 1.97 0.00 0.00 0.00 1.38 3.34 0.00 1.76 4.06 8.92 0.00 0.00 4.82 2.86 17.19 1.07 10.40 10 E1_Ac KnownBoundary 0 3.78 2.96 1.83 2.03 3.14 30.61 8.13 0.00 1.39 1.64 2.68 11.55 0.00 9.36 5.69 10.68 4.49 7.92 12.14 6.52 32.74 5.45 30.82 11 ER1c ExonRegion 0 4.23 3.63 0.00 1.36 3.25 17.29 5.67 0.74 0.00 0.49 5.94 4.33 0.00 4.06 3.52 9.55 4.48 0.79 6.37 4.26 32.27 4.91 16.57 12 E1_Da KnownBoundary 0 2.96 6.45 2.96 0.00 4.33 16.81 8.88 4.39 3.21 3.01 5.16 0.00 0.00 5.71 5.69 24.27 13.28 3.98 3.95 0.00 14.89 6.25 31.93 13 E1a_E1e KnownJunction 0 0.00 0.00 1.57 0.00 0.00 0.00 2.08 0.00 0.00 0.00 10.53 0.00 0.00 0.00 0.00 4.27 9.26 0.00 0.00 0.00 16.87 2.57 0.00 14 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1d ExonRegion 0 4.66 4.07 0.00 1.36 2.68 20.81 7.61 1.73 0.06 1.15 12.37 0.22 0.70 5.52 5.80 16.20 10.56 1.85 3.03 2.87 36.80 8.75 23.35 16 ER1e ExonRegion 0 1.04 0.47 7.07 0.12 1.37 2.56 0.80 3.65 2.21 4.78 13.00 0.77 4.35 11.38 18.82 27.06 11.05 7.00 3.44 2.24 25.38 11.80 30.92 17 E1_Ae KnownBoundary 0 0.00 0.00 21.79 1.43 4.33 5.74 5.65 4.97 8.07 19.10 16.90 0.00 0.00 33.49 9.27 59.73 26.65 24.83 0.00 8.44 41.58 8.63 61.89 18 ER1f ExonRegion 0 4.69 2.31 24.05 4.25 6.51 3.70 4.57 7.18 7.82 19.70 47.79 1.10 14.25 37.48 56.66 31.18 17.93 19.64 6.68 4.46 72.12 22.80 54.76 19 E1b_E4a KnownJunction 0 7.26 0.00 32.88 7.26 6.96 15.50 5.87 9.82 8.25 29.52 41.75 5.40 26.13 37.55 74.29 30.68 12.34 16.75 17.98 6.20 92.67 35.88 46.10 20 I1_SR1 SilentIntronRegion 0 1.17 0.00 3.70 0.75 0.00 2.03 0.98 2.37 2.71 2.52 6.41 1.31 0.00 7.79 4.96 9.30 2.43 2.03 0.00 2.35 5.27 4.99 10.26 21 E2_Aa NovelBoundary 0 3.41 2.76 5.35 3.76 0.00 0.00 0.00 9.28 5.27 10.85 14.64 7.65 0.00 9.54 9.64 20.93 8.79 4.93 0.00 3.26 12.23 15.98 20.74 22 ER2a ExonRegion 0 2.51 2.41 2.27 0.97 1.59 5.42 0.79 0.00 2.18 0.00 5.66 2.11 0.00 6.99 5.23 1.69 1.88 0.00 3.78 0.00 3.79 2.25 9.97 23 E2_Da NovelBoundary 0 12.37 0.00 3.99 1.40 3.82 0.00 1.85 1.73 4.08 5.94 22.85 0.00 12.01 9.18 15.20 33.41 7.48 0.00 0.00 6.39 2.59 2.51 16.39 24 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 I2 Intron 0 5.06 1.05 2.60 0.53 1.90 2.84 1.03 4.16 3.81 4.75 8.75 3.74 1.80 7.96 5.31 8.07 4.05 2.91 2.88 1.65 3.70 4.31 6.07 26 I2_SR1 SilentIntronRegion 0 5.08 1.05 2.60 0.53 1.91 2.85 1.03 4.17 3.82 4.76 8.77 3.75 1.81 7.98 5.32 8.09 4.06 2.92 2.89 1.65 3.71 4.32 6.09 27 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.55 0.08 0.94 0.00 0.00 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E4_Aa NovelBoundary 0 7.04 0.00 8.63 3.93 0.00 14.08 2.25 4.93 3.88 5.00 9.53 0.00 0.00 0.00 6.30 3.85 4.77 5.14 0.00 0.00 2.97 4.96 23.73 30 ER4a ExonRegion 0 19.47 5.42 43.63 16.12 10.79 15.17 9.32 16.74 20.19 39.27 73.28 22.07 17.49 82.00 93.37 66.94 47.70 26.43 13.58 16.90 129.96 70.03 79.44 31 E4_Da KnownBoundary 0 48.90 15.06 38.41 29.67 17.15 30.10 20.40 30.72 19.27 48.73 92.81 6.30 32.47 118.78 118.05 101.08 79.85 40.25 7.91 20.13 163.77 109.91 114.30 32 E4a_E4b KnownJunction 0 3.78 2.57 1.09 0.00 0.00 0.00 0.00 2.46 1.59 1.67 24.64 0.00 0.00 24.19 9.77 3.93 4.21 3.81 0.00 3.13 5.44 13.72 12.21 33 ER4b ExonRegion 0 33.58 8.04 49.61 22.78 8.33 15.48 19.44 21.17 20.18 53.47 62.78 13.19 18.71 88.92 110.71 70.79 71.94 22.15 12.34 14.36 132.62 74.23 68.24 34 E4_Ab KnownBoundary 0 38.01 11.91 58.90 19.51 11.63 24.82 12.76 36.68 26.79 62.91 60.59 0.00 25.49 73.52 112.86 58.70 47.87 20.64 20.71 8.82 132.45 44.58 104.66 35 ER4c ExonRegion 0 14.17 2.94 25.93 14.25 4.48 8.37 7.95 12.70 15.25 28.31 33.68 7.83 14.79 54.86 60.90 43.43 25.36 14.73 7.91 6.55 70.40 48.85 49.09 36 E4_Db KnownBoundary 1 6.37 0.00 6.74 3.53 3.99 5.22 3.62 6.82 6.28 10.26 2.53 12.15 0.00 19.37 13.85 31.10 0.00 4.02 8.75 0.00 13.65 19.29 26.04 37 ER4d ExonRegion 0 6.08 1.21 0.74 0.12 0.82 1.52 1.90 0.34 0.72 0.63 1.21 1.62 2.07 3.78 2.33 2.77 0.87 0.47 0.40 0.28 3.20 1.62 1.86 38 E4_Dc KnownBoundary 0 18.23 0.00 2.63 2.70 23.17 16.01 3.53 10.02 11.49 7.52 20.06 37.66 53.24 67.28 57.48 33.92 14.12 0.00 4.71 8.69 30.27 17.02 29.02 39 ER4e ExonRegion 0 8.61 0.00 1.27 0.36 6.15 6.72 0.00 3.40 2.39 1.61 7.92 31.17 26.58 34.70 25.24 16.25 6.38 0.25 0.00 2.13 13.81 5.14 12.82 40 ER4f ExonRegion 0 3.17 0.00 0.00 0.00 0.00 3.67 0.00 1.73 0.00 0.00 0.97 6.49 0.00 2.44 2.90 0.00 0.00 0.00 0.00 0.00 0.00 2.08 4.40 41 ER4g ExonRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.17