Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UBL4A Gene 0 55.90 53.08 172.52 72.07 49.66 78.13 64.32 80.87 63.18 121.44 122.94 26.46 23.99 110.37 90.86 77.92 78.29 118.70 56.15 72.57 70.71 56.85 61.90 2 369660 Transcript 0 64.22 56.34 113.30 64.35 50.35 58.66 44.39 53.35 36.37 75.56 55.83 26.10 16.67 42.40 49.24 39.61 36.07 31.62 32.96 34.81 29.85 37.57 38.81 3 369653 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 421431 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 458720 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 417913 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 481237 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 477777 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 3.14 4.54 2.89 0.32 9.41 39.00 14.85 0.52 0.29 3.22 8.70 3.25 1.17 15.40 9.22 10.56 8.19 2.01 4.49 4.22 10.66 13.80 17.51 10 E1_Ab KnownBoundary 0 0.00 0.00 0.00 1.96 3.57 45.31 14.53 3.66 0.00 6.23 15.32 0.00 0.00 0.00 0.00 11.71 0.00 6.09 9.51 3.20 0.00 17.76 12.04 11 E1_Ac KnownBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Ad KnownBoundary 0 11.11 12.30 11.95 5.09 25.64 98.30 15.41 4.48 1.62 3.09 31.11 0.00 8.28 5.12 0.00 34.18 28.14 31.42 18.26 28.44 34.16 27.43 51.56 13 E1_Ae KnownBoundary 0 0.00 3.35 3.67 2.00 4.33 25.61 4.50 5.01 1.59 3.22 0.00 0.00 0.00 0.00 0.00 8.72 4.77 9.45 0.00 3.26 6.05 0.00 4.18 14 E1_Af KnownBoundary 0 8.96 14.34 36.78 6.96 12.22 21.46 30.74 19.18 17.62 29.44 41.17 0.00 0.00 18.13 14.22 25.55 38.62 40.91 31.25 19.88 17.73 7.65 28.00 15 ER1b ExonRegion 0 12.70 16.27 9.80 1.36 26.76 110.03 26.48 5.19 1.24 8.03 31.57 8.66 4.69 25.99 26.11 38.64 36.31 7.39 19.11 21.28 34.52 34.73 52.86 16 ER1c ExonRegion 0 17.40 20.11 16.88 2.42 26.46 122.86 37.37 5.57 5.76 11.72 46.60 12.99 4.69 29.41 39.65 41.61 43.65 18.48 22.65 30.97 40.89 33.34 58.08 17 ER1d ExonRegion 0 22.16 29.79 33.09 5.45 30.69 120.81 51.79 14.54 10.75 26.18 73.56 8.91 4.69 55.22 51.71 48.60 67.18 33.91 39.91 44.31 54.96 30.52 76.70 18 ER1e ExonRegion 1 23.28 29.49 39.21 5.45 34.78 117.36 58.25 22.47 15.44 29.82 80.22 4.33 7.04 53.60 49.32 71.33 72.62 41.57 41.41 46.81 61.70 31.25 76.35 19 ER1f ExonRegion 0 12.38 25.48 50.50 6.73 21.63 52.28 45.16 29.86 21.84 41.00 56.42 3.78 8.58 39.22 33.02 63.87 45.51 58.07 44.87 32.37 47.50 12.72 49.92 20 E1a_E2a KnownJunction 0 3.26 15.19 59.49 6.33 16.04 18.74 15.59 35.32 25.49 44.97 21.06 6.30 14.61 25.43 14.83 43.58 11.87 83.32 49.98 19.81 40.59 10.59 38.84 21 E1a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER2a ExonRegion 0 1.42 9.67 74.09 17.61 5.10 18.16 7.83 27.54 33.15 73.52 106.02 13.85 8.36 60.44 35.01 39.62 56.05 55.19 29.03 43.28 78.13 44.60 41.09 23 E2_Da KnownBoundary 0 0.00 0.00 11.86 1.83 0.00 10.33 0.00 5.96 4.77 8.06 15.74 0.00 0.00 17.25 4.45 0.00 4.58 12.73 4.80 8.69 0.00 5.88 0.00 24 E2a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E2a_E2d KnownJunction 1 0.00 21.05 113.66 38.89 7.89 15.33 17.75 46.82 56.05 112.07 162.15 26.56 0.00 118.90 70.46 100.74 126.32 113.25 44.90 101.31 120.34 77.58 87.67 26 ER2b ExonRegion 0 1.06 0.00 19.72 1.65 0.23 2.08 0.54 5.76 4.81 5.98 6.93 0.00 0.00 7.33 7.05 2.90 6.39 12.17 3.29 5.89 0.49 2.81 1.61 27 E2_Ab KnownBoundary 0 0.00 0.00 30.04 3.43 0.00 5.68 0.00 6.86 4.75 4.19 6.21 0.00 0.00 4.83 10.01 8.03 0.00 24.00 0.00 9.20 3.15 0.00 4.10 28 E2_Ac KnownBoundary 0 3.78 0.00 22.23 0.00 4.33 5.79 0.00 2.55 3.18 7.90 2.53 0.00 0.00 2.47 5.56 19.74 9.16 13.22 3.95 2.94 0.00 0.00 0.00 29 ER2c ExonRegion 0 2.12 0.11 29.15 1.36 2.68 7.14 0.00 7.55 4.81 9.48 2.85 0.00 0.00 5.30 6.87 17.21 6.60 16.82 2.85 7.39 2.20 0.00 2.94 30 ER2d ExonRegion 0 2.79 3.77 17.90 1.06 1.37 2.46 0.06 6.53 2.80 10.57 0.00 0.00 0.00 6.65 15.00 15.66 7.97 13.20 7.15 3.11 0.21 3.56 1.00 31 E2_Db KnownBoundary 0 3.26 5.85 19.16 5.66 0.00 2.90 0.00 4.68 1.79 13.94 2.53 0.00 0.00 9.48 16.44 3.50 0.00 12.31 4.05 0.00 0.00 5.76 0.00 32 ER2e ExonRegion 0 1.81 4.91 18.81 2.57 1.95 8.62 5.04 3.07 5.78 12.67 6.01 0.27 0.00 10.70 9.21 2.78 10.11 9.30 4.80 11.79 2.90 2.58 2.47 33 E2_Ad KnownBoundary 0 3.70 3.03 26.34 1.76 7.39 20.56 8.21 4.68 11.14 13.22 4.42 0.00 0.00 12.30 8.90 0.00 18.89 17.20 4.24 12.14 3.15 3.00 0.00 34 ER2f ExonRegion 0 14.78 20.11 151.95 50.81 22.92 38.13 30.38 65.91 68.82 131.63 111.78 21.65 12.21 132.56 104.06 122.81 84.58 196.63 75.79 99.64 96.46 49.69 123.56 35 E2_Dc KnownBoundary 0 14.15 25.26 185.53 63.23 49.92 59.45 48.14 97.30 71.64 162.09 77.91 48.92 26.78 140.74 104.58 95.96 63.86 235.70 74.36 106.61 76.17 39.56 133.34 36 ER2g ExonRegion 0 17.03 30.75 160.43 40.45 45.64 110.73 66.14 77.85 62.01 119.70 136.51 21.12 25.54 123.94 90.22 91.56 84.33 185.61 55.88 85.33 109.60 66.28 60.87 37 E2d_E3a KnownJunction 0 44.75 73.67 224.53 65.23 42.28 93.75 98.88 122.69 72.66 133.21 168.94 24.61 40.58 162.11 118.92 135.35 106.31 206.31 90.17 88.65 92.42 70.17 81.09 38 ER3a ExonRegion 0 39.49 52.66 242.31 78.90 36.32 89.58 56.51 97.46 75.24 146.85 163.60 15.11 24.05 163.45 117.72 126.60 113.28 227.90 78.14 102.35 98.70 75.10 75.29 39 E3_Da KnownBoundary 0 43.71 45.26 298.01 107.71 19.10 78.48 46.33 86.34 85.36 195.37 168.46 29.56 35.55 172.76 101.24 120.22 128.94 265.88 85.46 121.57 105.45 77.28 87.33 40 E3a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER3b ExonRegion 0 34.75 53.10 247.50 88.97 46.89 83.03 65.16 119.81 93.12 201.65 233.09 33.71 31.73 205.96 139.18 145.89 142.78 239.70 76.99 126.86 128.30 90.67 82.46 42 E3_Ab KnownBoundary 0 25.63 70.45 310.57 108.81 79.12 119.19 97.86 117.88 118.92 215.92 237.69 25.36 26.30 225.74 138.95 168.93 147.08 314.01 93.56 123.30 156.48 110.65 97.31 43 ER3c ExonRegion 0 35.29 54.39 262.73 113.09 61.32 119.77 87.67 120.11 103.59 209.54 253.37 29.35 34.90 216.14 109.03 144.49 148.43 271.25 116.75 109.60 128.25 119.95 94.11 44 E3_Db KnownBoundary 0 36.23 45.78 192.22 73.85 40.92 129.02 98.17 90.45 77.37 154.21 193.26 59.57 31.65 187.36 89.62 101.00 162.60 131.66 40.66 113.20 101.13 80.77 63.25 45 E3_Dc KnownBoundary 0 27.34 50.58 174.74 84.90 40.58 113.34 65.71 101.62 68.08 124.88 134.56 69.77 48.37 133.56 107.55 110.83 135.11 128.51 64.85 73.70 125.35 68.83 88.52 46 ER3d ExonRegion 0 23.93 55.26 234.37 91.55 43.98 118.00 81.51 114.45 95.64 186.75 182.78 58.73 41.60 183.31 107.60 141.11 165.62 117.29 56.09 102.22 137.49 87.05 85.03 47 ER3e ExonRegion 0 34.38 52.85 250.10 102.13 42.59 111.29 86.50 137.67 96.42 212.06 230.04 46.43 40.33 224.65 145.68 144.20 153.37 185.63 98.45 111.26 126.64 104.24 88.30 48 E3_Dd KnownBoundary 1 60.01 41.51 230.71 100.35 72.07 105.28 124.67 133.45 89.32 202.40 209.42 24.46 44.32 212.20 66.01 71.78 177.47 221.94 17.88 126.49 66.47 94.30 91.68 49 ER3f ExonRegion 0 60.33 48.85 179.92 66.73 50.51 92.19 82.15 81.90 68.89 116.32 128.59 20.37 25.01 128.38 109.05 76.21 80.61 138.00 56.15 81.09 72.52 53.65 69.43 50 E3_De KnownBoundary 0 353.17 99.72 42.49 21.44 70.03 88.30 60.77 17.50 11.92 16.12 27.69 0.00 13.64 4.94 9.15 38.96 4.77 27.77 0.00 17.45 10.93 8.39 34.57 51 ER3g ExonRegion 0 125.31 108.14 223.72 128.39 91.28 78.31 73.93 106.17 72.45 147.91 102.96 48.96 32.16 69.40 89.25 68.65 63.95 61.22 61.42 65.39 49.03 61.35 60.10