Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ABCD1 Gene 0 17.39 4.27 36.00 21.36 10.29 11.71 6.27 37.83 35.68 46.41 21.20 12.16 13.41 22.73 46.20 18.75 28.16 19.86 15.05 11.79 60.48 27.51 34.02 2 218104 Transcript 0 23.18 4.19 56.60 35.31 15.05 17.31 8.88 61.97 50.65 62.68 27.23 15.83 19.24 24.71 53.30 23.49 39.31 30.86 18.10 13.89 71.69 36.51 47.61 3 370129 Transcript 0 3.82 1.33 4.19 3.90 0.44 2.04 1.03 4.69 5.23 2.06 3.67 6.56 1.90 6.09 13.95 4.39 5.95 5.38 4.68 2.44 8.17 2.02 7.54 4 443684 Transcript 0 0.64 0.00 0.01 0.00 1.62 0.56 1.21 0.01 0.52 0.00 0.00 0.00 0.00 1.32 1.36 0.00 0.00 0.56 0.97 0.00 0.00 1.91 4.47 5 ER1a ExonRegion 0 4.45 2.54 16.31 9.81 5.37 8.57 3.60 16.63 22.41 30.55 18.52 5.56 5.86 21.69 30.08 11.99 23.39 12.70 13.26 8.87 50.16 17.54 25.26 6 E1_Ab KnownBoundary 0 16.60 0.00 21.67 10.19 4.24 8.12 9.63 39.51 32.18 42.42 22.22 5.40 13.64 31.55 60.33 22.99 17.39 32.54 8.19 8.88 63.75 37.84 35.60 7 ER1b ExonRegion 0 7.26 4.39 22.17 10.12 5.76 9.46 4.51 20.11 24.76 29.98 23.05 10.07 7.51 21.84 42.86 14.41 24.34 20.05 7.71 12.44 60.71 20.95 25.84 8 E1a_E2a KnownJunction 0 12.37 9.27 35.24 12.12 0.00 25.67 4.50 26.41 32.44 29.63 13.74 6.30 0.00 16.66 48.21 7.95 41.51 37.56 9.13 12.78 41.82 13.96 18.35 9 I1_AR3 ActiveIntronRegion 0 4.91 1.24 5.57 3.50 2.61 2.62 0.79 3.63 4.02 6.24 4.18 2.08 0.44 5.36 9.05 2.39 4.61 5.77 7.30 4.80 4.32 3.52 12.19 10 I1_SR3 SilentIntronRegion 0 9.15 3.36 13.84 9.01 4.43 2.49 4.80 8.19 7.08 8.72 2.76 1.00 8.27 10.95 13.87 5.27 8.36 4.18 5.92 4.02 6.10 6.74 11.47 11 I1_AR4 ActiveIntronRegion 0 14.00 3.89 9.53 5.52 1.97 2.93 1.51 7.89 7.89 6.75 4.20 1.00 4.59 9.41 10.87 5.58 4.23 7.99 3.03 3.76 7.82 4.51 11.24 12 E2_Aa NovelBoundary 0 14.08 3.09 14.49 6.59 4.33 0.00 1.99 14.95 7.75 7.39 0.00 0.00 0.00 4.36 13.35 3.76 4.77 8.83 8.66 2.49 11.61 0.00 12.21 13 ER2a ExonRegion 0 12.08 6.36 43.24 24.93 13.05 14.81 6.31 44.38 39.88 45.72 19.65 10.57 15.24 31.09 55.43 20.08 31.44 23.51 8.08 18.26 67.57 28.69 44.15 14 E2_Da KnownBoundary 0 0.00 0.00 2.25 5.09 0.00 2.38 1.99 4.23 2.49 3.95 2.37 11.85 0.00 7.42 8.90 0.00 0.00 8.66 0.00 3.26 17.98 12.49 8.19 15 E2a_E4a KnownJunction 0 9.71 6.58 42.52 26.67 15.53 20.22 2.25 48.43 32.96 43.49 14.69 32.26 6.98 22.66 35.85 8.12 22.07 19.86 3.48 11.76 59.49 28.29 19.12 16 ER2b ExonRegion 0 3.82 1.33 4.19 3.90 0.44 2.04 1.03 4.69 5.23 2.06 3.67 6.56 1.90 6.09 13.95 4.39 5.95 5.38 4.68 2.44 8.17 2.02 7.54 17 E2_Db NovelBoundary 0 0.00 0.00 0.00 2.00 3.65 0.00 0.00 2.55 1.79 3.04 4.63 5.85 6.33 4.59 6.30 3.42 17.39 2.03 0.00 2.56 6.30 6.25 3.41 18 E3_Aa NovelBoundary 0 9.56 2.96 5.32 7.69 11.38 8.01 9.76 8.13 19.59 6.31 5.00 6.15 12.82 4.83 0.00 0.00 17.20 4.10 4.80 6.07 5.62 17.39 27.32 19 ER3a ExonRegion 0 1.29 0.00 0.01 0.00 3.25 1.11 2.41 0.02 1.04 0.00 0.00 0.00 0.00 2.65 2.73 0.00 0.00 1.12 1.93 0.00 0.00 3.82 8.95 20 E3_Da NovelBoundary 0 6.52 0.00 7.18 11.72 0.00 4.66 3.97 8.95 8.13 16.63 0.00 0.00 12.82 2.35 4.45 4.36 8.51 6.38 4.14 3.26 0.00 12.25 25.01 21 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER4a ExonRegion 0 20.72 7.47 46.44 24.39 14.78 12.99 6.89 49.21 50.20 63.79 29.99 11.78 16.99 26.70 53.58 21.57 46.81 20.87 15.66 16.72 78.84 38.80 51.94 23 E4a_E5a KnownJunction 0 26.89 20.65 57.15 29.13 8.66 9.88 12.67 66.29 63.71 56.81 31.69 12.60 13.64 16.78 50.19 26.15 35.53 32.38 25.13 16.94 52.57 29.51 51.90 24 ER5a ExonRegion 0 18.26 6.44 48.83 26.11 10.20 14.75 8.49 57.20 54.71 75.09 28.30 18.01 13.90 25.02 72.17 29.83 44.01 25.28 20.77 20.96 85.42 54.27 50.86 25 E5a_E6a KnownJunction 0 25.12 6.71 36.84 24.04 21.65 18.97 14.62 48.22 45.31 67.34 24.64 12.60 13.64 22.19 21.26 39.22 33.10 13.35 12.71 13.81 107.18 44.15 54.21 26 ER6a ExonRegion 0 20.45 6.94 40.40 23.04 12.45 21.95 11.41 50.22 49.40 70.15 23.34 15.22 10.22 19.63 69.02 27.03 48.75 22.31 13.55 21.79 80.01 52.13 67.02 27 E6a_E7a KnownJunction 0 34.67 5.79 76.58 39.89 29.20 10.39 4.06 43.83 62.88 71.18 23.85 29.86 18.18 16.89 65.52 34.86 26.55 27.19 17.13 21.73 90.94 56.52 62.06 28 ER7a ExonRegion 0 21.83 5.15 50.48 32.63 18.36 18.50 10.35 59.15 58.51 81.62 28.93 19.51 14.52 32.80 68.38 37.19 41.22 35.26 18.68 17.85 101.70 50.59 57.79 29 E7a_E8a KnownJunction 0 34.52 3.35 67.62 55.24 19.86 31.74 15.24 73.73 73.00 80.53 28.59 31.06 13.15 29.73 70.71 42.38 50.12 41.58 31.53 10.80 129.98 61.05 86.30 30 E8_Da NovelBoundary 0 25.56 9.54 75.54 69.99 41.60 15.28 12.41 72.25 81.91 91.44 30.11 17.26 20.13 36.20 80.23 23.75 44.79 69.23 13.08 20.07 95.14 72.32 49.34 31 ER8a ExonRegion 0 20.76 5.90 65.70 54.47 22.53 20.82 12.34 68.36 75.14 85.20 30.80 21.93 13.16 33.22 75.81 32.60 52.28 58.95 17.78 15.37 112.89 67.01 68.30 32 ER8b ExonRegion 0 32.91 7.76 72.40 44.31 20.87 20.20 13.22 87.13 71.41 91.55 35.36 28.01 28.79 37.17 77.50 36.83 42.54 51.58 27.64 21.13 103.08 53.81 64.58 33 E8b_E9a KnownJunction 0 24.52 3.29 83.08 36.86 7.98 28.90 13.07 81.08 57.00 57.24 23.53 12.90 6.01 20.60 45.37 19.99 62.46 33.49 33.88 5.69 80.13 29.27 73.75 34 E9_Aa NovelBoundary 0 0.00 0.00 14.99 5.63 0.00 0.00 0.00 9.73 2.86 8.65 0.00 6.30 0.00 0.00 0.00 0.00 0.00 2.53 4.05 3.26 0.00 2.94 8.62 35 ER9a ExonRegion 0 30.83 6.65 93.30 64.09 21.59 17.65 11.31 102.53 85.69 120.48 50.46 16.45 17.22 34.20 97.35 37.41 51.34 57.52 25.15 22.10 116.36 67.09 59.98 36 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER10a ExonRegion 0 30.00 6.29 84.85 53.51 29.69 21.12 13.61 83.01 77.59 83.73 39.15 19.10 18.39 30.08 64.91 28.78 58.87 49.80 25.23 22.61 87.78 53.76 52.98 38 E10a_E11a KnownJunction 0 46.08 0.00 70.84 55.64 22.24 26.29 15.63 92.01 70.51 85.58 43.01 12.60 68.34 32.73 77.38 47.51 67.23 35.44 15.53 22.82 87.41 52.29 99.96 39 ER11a ExonRegion 0 30.10 4.56 46.05 26.92 12.16 12.87 7.23 46.97 38.25 51.50 20.39 15.61 21.59 23.23 51.24 20.80 25.88 17.33 18.76 10.03 60.78 26.50 32.84