Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM50A Gene 0 69.47 33.09 281.75 103.78 70.39 75.31 60.97 129.47 101.51 132.05 106.53 47.24 51.33 138.83 190.21 104.52 103.36 129.46 100.62 102.51 187.56 110.57 132.62 2 393600 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 464419 Transcript 0 56.63 21.38 95.81 39.53 26.52 35.05 23.99 52.99 38.09 53.69 30.85 13.92 7.99 51.69 84.43 56.11 31.89 49.64 57.34 27.21 70.67 37.45 72.84 4 481619 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 158526 Transcript 0 0.96 0.45 12.06 3.45 0.45 2.57 1.20 2.33 5.53 3.08 4.69 3.64 0.68 10.70 14.09 4.54 3.73 6.50 4.05 2.81 23.37 5.13 7.93 6 490480 Transcript 0 20.81 2.57 37.88 4.66 7.85 10.27 11.93 17.09 11.24 13.51 12.26 4.74 6.11 20.09 26.08 18.52 16.12 12.40 9.21 9.30 11.56 9.92 24.05 7 478509 Transcript 0 9.09 0.93 17.81 4.58 8.63 6.74 5.21 6.18 4.13 8.06 6.61 1.14 4.30 9.61 15.66 7.75 4.41 10.53 2.79 5.25 13.52 4.18 5.88 8 494278 Transcript 0 3.52 1.16 14.03 5.44 4.12 12.61 2.77 14.94 6.26 11.67 4.44 1.15 1.15 5.22 8.79 2.76 2.59 12.22 15.37 3.28 12.48 6.76 7.64 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 9.33 5.58 5.51 1.13 12.75 11.65 10.62 1.69 0.85 1.58 3.01 0.37 2.67 7.40 3.46 3.58 2.56 2.21 0.62 1.30 3.41 1.43 6.73 11 E1_Ac KnownBoundary 0 86.90 42.30 46.63 9.66 111.63 81.94 81.92 11.46 5.41 14.99 12.06 10.95 19.64 42.79 18.54 33.67 12.16 14.22 3.76 8.69 18.97 12.80 38.41 12 ER1c ExonRegion 1 92.95 28.12 143.66 43.92 83.22 68.02 84.64 62.42 50.64 51.74 46.65 19.00 51.30 48.43 100.71 44.92 38.50 57.30 33.09 59.49 103.03 44.65 63.83 13 E1a_E3b KnownJunction 0 45.05 8.75 272.23 106.21 23.26 29.24 39.75 105.44 101.10 93.94 89.92 37.51 21.59 132.09 200.51 89.46 77.79 80.05 77.37 90.51 117.01 96.57 110.20 14 ER2a ExonRegion 0 1.91 0.90 13.31 1.91 0.91 2.35 2.40 4.66 4.82 5.01 6.69 0.98 1.35 14.63 10.37 9.07 7.47 10.42 4.05 2.49 25.05 7.63 11.84 15 E2a_E3b KnownJunction 0 0.00 0.00 10.82 4.99 0.00 2.78 0.00 0.00 6.25 1.16 2.68 6.30 0.00 6.77 17.80 0.00 0.00 2.57 4.05 3.13 21.68 2.63 4.01 16 I2_AR1 ActiveIntronRegion 0 6.70 0.00 23.89 0.00 12.93 3.36 11.69 14.69 8.03 14.91 11.60 4.33 0.00 20.57 21.28 19.32 23.66 25.56 3.72 12.41 29.38 11.46 23.98 17 I2_SR2 SilentIntronRegion 0 5.34 0.00 18.33 0.00 11.98 1.91 10.02 11.35 6.98 15.16 9.16 3.95 0.00 17.23 22.83 15.25 21.81 19.36 3.74 7.77 31.71 14.13 24.90 18 ER3a ExonRegion 0 20.81 2.57 37.88 4.66 7.85 10.27 11.93 17.09 11.24 13.51 12.26 4.74 6.11 20.09 26.08 18.52 16.12 12.40 9.21 9.30 11.56 9.92 24.05 19 E3_Ab KnownBoundary 0 19.63 3.35 41.93 9.52 27.59 35.15 19.39 20.82 15.02 20.95 15.48 0.00 8.28 14.89 42.77 24.87 8.88 13.22 21.74 8.56 11.86 14.33 28.00 20 ER3b ExonRegion 0 97.66 33.02 427.98 104.13 68.33 76.71 68.25 189.76 155.83 182.59 172.00 84.42 131.60 232.23 242.08 112.09 175.07 145.77 92.79 158.46 311.85 134.51 172.67 21 E3a_E4a KnownJunction 0 172.85 38.28 528.63 130.52 66.81 72.46 82.41 203.15 188.92 233.83 162.94 127.69 134.57 214.43 364.92 125.44 161.85 188.41 96.85 227.74 377.89 107.65 219.47 22 ER4a ExonRegion 0 119.81 43.05 508.87 147.15 66.89 83.76 66.42 199.87 199.18 233.86 203.96 95.55 118.11 259.38 357.83 187.62 197.87 219.75 183.90 208.03 382.86 170.17 252.18 23 E4_Da NovelBoundary 0 153.66 64.26 609.85 210.83 94.06 112.26 104.31 289.53 249.62 295.35 284.60 142.25 175.96 239.69 436.62 258.99 236.47 233.80 248.20 209.20 430.53 216.83 274.61 24 E4b_E5b KnownJunction 0 187.51 69.86 832.58 255.21 351.44 275.35 140.92 365.60 286.48 373.01 258.43 171.81 196.90 412.39 502.01 238.48 343.71 289.68 224.57 262.83 567.86 326.07 276.49 25 ER4b ExonRegion 0 125.60 65.64 662.63 202.36 174.66 162.58 103.31 288.59 247.19 308.75 258.28 158.85 164.80 307.01 399.97 242.69 286.27 235.17 213.31 222.60 485.35 269.56 260.04 26 ER5a ExonRegion 0 6.90 0.81 16.46 5.19 4.62 3.08 3.52 6.25 3.75 9.66 4.28 2.28 6.69 8.52 7.58 11.43 3.26 10.89 3.76 5.22 9.86 4.11 7.73 27 E5_Ab KnownBoundary 0 3.11 3.35 32.35 5.46 3.90 2.21 5.79 2.14 1.79 13.54 0.00 0.00 0.00 28.08 0.00 15.12 0.00 21.10 8.47 5.94 13.10 0.00 0.00 28 ER5b ExonRegion 0 150.40 80.85 699.70 229.25 194.91 206.56 176.53 270.88 244.43 330.25 256.96 144.57 200.44 400.80 443.91 257.26 290.32 292.03 257.64 260.29 509.53 245.74 350.49 29 E5a_E6a KnownJunction 1 329.98 154.25 939.26 439.87 232.34 241.57 220.15 364.74 284.43 337.47 290.81 79.23 193.82 445.53 655.30 312.99 344.65 371.92 433.14 317.54 510.65 307.39 477.95 30 ER6a ExonRegion 0 223.53 109.79 858.11 325.69 227.99 237.49 190.36 362.93 265.85 352.05 271.31 162.27 155.14 390.17 476.86 333.92 325.42 350.33 294.42 310.11 540.42 351.28 386.53 31 E6a_E7a KnownJunction 0 249.53 92.22 880.48 264.60 207.98 254.57 185.31 359.07 258.76 354.31 261.65 173.01 129.54 379.36 450.34 298.38 274.61 378.72 211.39 340.49 456.60 250.93 327.37 32 ER7a ExonRegion 0 165.88 81.19 755.96 294.26 184.15 201.61 152.00 273.64 223.32 299.41 256.84 102.16 112.63 317.75 369.67 276.27 271.22 320.60 253.55 208.92 436.73 289.55 319.79 33 E7a_E8a KnownJunction 1 242.27 109.85 923.03 380.97 281.75 262.97 216.53 350.03 261.72 343.40 305.02 48.32 143.50 388.55 428.21 406.13 272.09 368.64 370.74 303.41 453.08 356.56 412.65 34 ER8a ExonRegion 0 212.95 131.53 750.12 319.60 240.21 259.07 206.20 366.15 266.17 358.13 311.54 99.09 126.40 391.15 494.99 313.85 268.76 428.62 320.90 317.05 457.06 317.94 389.91 35 E8_Da KnownBoundary 0 35.86 0.00 68.95 32.03 38.03 7.67 17.93 30.81 13.83 21.30 16.64 5.25 0.00 14.95 36.71 15.89 4.21 33.12 12.52 8.95 11.06 11.08 15.71 36 E8a_E9a KnownJunction 0 222.85 141.22 575.29 251.88 241.09 167.97 225.89 350.16 245.66 348.96 256.06 104.88 121.58 352.70 468.51 213.28 293.03 377.47 240.67 271.14 414.40 346.21 298.17 37 ER8b ExonRegion 0 21.20 4.45 92.20 30.58 16.94 14.35 14.97 20.88 19.14 16.37 13.96 1.43 2.29 18.56 28.12 19.63 9.93 36.15 29.22 16.47 33.18 18.70 13.99 38 E8_Db KnownBoundary 0 19.86 3.29 76.25 18.18 23.77 28.73 9.72 25.96 11.11 17.81 17.64 0.00 6.82 9.12 41.66 11.28 16.74 28.98 11.48 14.57 39.97 8.94 7.43 39 ER8c ExonRegion 0 11.29 1.05 19.15 3.96 12.64 10.39 6.89 6.11 4.51 6.46 8.95 0.00 1.91 10.71 23.75 4.07 5.56 10.16 1.83 5.28 17.18 4.24 4.02 40 E8_Dc NovelBoundary 0 51.79 0.00 60.70 20.68 15.53 18.28 14.31 19.43 17.10 14.21 2.05 0.00 0.00 11.71 17.80 12.82 8.42 13.10 17.04 2.94 22.24 21.00 23.82 41 I8_SR2 SilentIntronRegion 0 8.47 2.03 17.16 6.81 21.41 16.50 3.97 6.91 2.47 1.15 3.87 0.00 0.00 25.58 24.30 17.83 3.30 9.24 25.48 6.38 24.24 6.25 8.81 42 E9_Aa NovelBoundary 0 28.38 3.35 88.11 29.53 11.54 57.24 23.41 19.22 7.81 21.49 4.63 5.70 0.00 21.72 23.73 16.32 25.15 17.58 32.66 14.00 22.55 19.84 22.11 43 ER9a ExonRegion 0 175.89 89.56 686.05 261.55 228.27 198.86 184.10 321.85 256.26 352.55 294.13 95.92 90.76 365.70 485.83 265.14 268.96 367.87 217.31 273.72 437.74 284.47 300.99 44 E9a_E10a KnownJunction 0 279.53 69.33 881.73 339.98 289.98 291.88 185.17 334.75 274.27 335.37 254.49 145.70 101.78 357.23 550.72 351.45 221.79 399.90 277.56 284.62 433.31 244.20 383.62 45 ER10a ExonRegion 0 192.68 76.35 871.11 316.78 233.33 235.89 171.92 363.35 252.46 371.60 297.70 109.97 76.66 342.04 556.57 379.84 232.86 479.68 297.51 287.31 426.16 358.71 409.63 46 E10_Da KnownBoundary 0 51.86 21.31 112.15 57.64 62.39 48.32 43.24 73.24 39.12 61.76 34.17 29.71 12.82 42.73 47.96 67.16 26.09 53.81 72.28 18.02 55.60 50.03 77.60 47 E10a_E10b KnownJunction 0 166.55 91.83 734.10 217.42 193.80 155.99 148.92 325.88 193.46 329.03 309.50 158.90 127.26 284.95 492.37 320.60 231.14 353.51 275.68 254.01 392.66 319.39 307.31 48 ER10b ExonRegion 0 56.63 21.38 95.81 39.53 26.52 35.05 23.99 52.99 38.09 53.69 30.85 13.92 7.99 51.69 84.43 56.11 31.89 49.64 57.34 27.21 70.67 37.45 72.84 49 E10_Ab KnownBoundary 0 44.82 21.90 92.66 39.79 26.15 29.13 17.75 37.95 22.45 31.29 17.69 0.00 0.00 31.43 27.57 11.28 17.02 36.11 37.37 20.39 73.21 24.31 38.33 50 E10_Ac KnownBoundary 0 62.01 15.66 95.98 59.20 34.38 49.46 10.20 43.83 48.38 41.50 42.12 0.00 0.00 35.91 118.55 94.59 65.64 39.96 160.00 79.58 73.82 48.56 139.14 51 ER10c ExonRegion 1 196.84 101.68 910.14 313.80 209.38 183.84 140.34 431.68 279.14 394.54 386.10 116.90 69.18 427.96 662.94 372.26 316.06 464.71 423.65 337.76 548.17 368.26 473.53 52 ER10d ExonRegion 1 180.48 88.04 823.48 301.01 166.44 179.80 137.27 426.77 289.63 382.62 350.56 110.99 67.90 388.20 613.75 305.93 311.48 429.48 392.31 333.46 552.33 307.75 404.39 53 E10_Db KnownBoundary 0 9.85 0.00 2.90 7.59 0.00 14.99 4.37 7.06 1.50 4.11 5.21 0.00 0.00 4.47 0.00 0.00 0.00 7.92 0.00 0.00 6.24 0.00 12.12 54 E10b_E10d KnownJunction 0 173.36 68.34 689.92 314.55 135.31 159.74 151.08 364.45 279.13 339.56 255.49 98.58 114.93 334.81 559.99 206.61 232.44 385.18 260.15 320.35 458.26 278.06 313.79 55 ER10e ExonRegion 0 3.52 1.16 14.03 5.44 4.12 12.61 2.77 14.94 6.26 11.67 4.44 1.15 1.15 5.22 8.79 2.76 2.59 12.22 15.37 3.28 12.48 6.76 7.64 56 E10_Ad KnownBoundary 0 3.56 2.76 18.98 3.70 0.00 19.31 2.03 12.98 9.58 20.50 2.68 0.00 0.00 2.77 4.45 3.85 0.00 10.57 26.64 0.00 5.81 3.12 7.85 57 ER10f ExonRegion 0 98.42 74.17 658.67 326.24 115.36 168.05 129.29 362.80 290.09 360.75 271.19 147.82 124.22 313.62 499.31 213.23 230.21 370.55 212.51 267.02 436.21 254.99 265.85 58 E10c_E11a KnownJunction 0 91.57 77.42 874.24 417.33 147.28 205.45 124.76 410.62 327.54 376.71 301.08 153.50 115.09 337.93 514.25 222.85 227.58 341.20 197.75 286.48 430.22 209.91 241.41 59 ER11a ExonRegion 0 135.33 78.00 772.69 291.00 157.90 150.46 129.37 359.86 273.36 335.93 311.22 126.57 86.45 297.19 522.44 249.14 280.33 276.39 286.45 256.71 513.55 265.97 339.78 60 E11_Da NovelBoundary 0 108.24 88.08 586.53 233.00 96.10 107.32 123.88 366.34 221.12 318.58 189.31 133.24 139.44 265.76 471.72 194.56 159.70 279.06 323.30 220.07 334.71 223.50 357.42 61 E11b_E12a KnownJunction 0 88.09 55.38 477.39 195.08 81.66 109.60 81.88 311.63 215.02 307.54 144.62 86.88 58.60 220.20 488.29 219.26 139.13 264.27 194.64 227.03 286.89 276.41 286.39 62 ER11b ExonRegion 0 86.21 72.40 479.00 185.49 78.04 102.57 90.43 298.50 206.72 286.80 174.41 107.37 71.13 243.51 501.72 207.06 149.42 241.13 254.62 211.63 314.69 248.49 323.03 63 ER12a ExonRegion 0 58.23 26.79 194.75 95.44 48.48 62.33 34.93 138.37 103.16 133.07 81.57 33.70 39.39 123.44 195.65 63.17 73.63 91.15 66.38 78.93 144.94 121.51 93.43 64 IG14_SR2 SilentIntergenicRegion 0 0.81 0.78 10.33 2.80 5.11 3.93 2.53 16.35 12.25 16.34 1.03 0.55 0.59 1.46 1.88 0.23 0.50 4.42 5.11 6.67 2.53 0.96 3.59