Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GABRA3 Gene 0 0.64 73.73 116.13 0.94 1.56 12.25 32.80 11.15 81.80 8.19 6.35 0.00 0.00 0.00 0.06 0.00 0.00 122.73 13.48 101.60 0.00 0.10 0.04 2 370311 Transcript 0 0.00 0.36 0.53 0.00 0.00 0.00 1.12 0.00 0.65 0.13 0.30 0.00 0.00 0.00 0.00 0.00 0.00 1.27 0.12 1.13 0.00 0.00 0.00 3 370314 Transcript 0 0.32 49.56 71.06 0.57 0.97 5.99 18.01 5.28 48.88 6.11 9.19 0.00 0.00 0.00 0.00 0.00 0.00 81.70 7.26 66.81 0.00 0.04 0.03 4 417858 Transcript 0 0.00 0.44 0.40 0.00 0.00 0.00 0.58 0.00 0.40 0.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 5 497894 Transcript 0 0.00 8.06 13.46 0.15 0.00 2.61 3.78 1.15 11.85 1.45 0.43 0.00 0.00 0.00 0.00 0.00 0.00 19.03 0.71 20.43 0.00 0.00 0.00 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 24.90 12.01 0.49 0.00 0.00 9.19 1.85 23.36 2.56 10.17 0.00 0.00 0.00 0.00 0.00 0.00 83.60 8.57 53.20 0.00 0.00 0.00 9 E2a_E3b KnownJunction 0 0.00 16.51 20.43 0.00 0.00 0.00 0.00 0.00 30.67 6.72 12.11 0.00 0.00 0.00 0.00 0.00 0.00 56.92 0.00 60.21 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 1.08 1.59 0.00 0.00 0.00 0.86 0.00 1.96 0.40 0.91 0.00 0.00 0.00 0.00 0.00 0.00 3.80 0.37 3.38 0.00 0.00 0.00 11 ER3b ExonRegion 0 0.00 18.94 42.61 0.63 0.00 6.74 23.61 6.08 61.51 7.13 9.85 0.00 0.00 0.00 0.00 0.00 0.00 142.76 15.41 134.21 0.00 0.43 0.00 12 E3a_E4a KnownJunction 0 0.00 33.02 49.79 0.00 0.00 9.60 57.06 4.89 45.89 4.81 2.63 0.00 0.00 0.00 0.00 0.00 0.00 110.02 4.24 110.90 0.00 2.94 0.00 13 ER4a ExonRegion 0 0.00 63.36 58.25 0.00 0.00 5.70 35.82 4.28 72.54 8.36 4.15 0.00 0.00 0.00 0.00 0.00 0.00 140.70 24.91 127.82 0.00 0.29 0.00 14 E4a_E5a KnownJunction 0 0.00 49.60 55.70 0.00 0.00 0.00 14.49 4.27 76.56 8.81 6.79 0.00 0.00 0.00 0.00 0.00 0.00 171.24 19.39 146.24 0.00 0.00 0.00 15 ER5a ExonRegion 0 0.00 55.36 53.14 0.00 0.00 7.23 19.06 8.97 90.44 13.54 5.71 0.00 0.00 0.00 0.00 0.00 0.00 187.57 15.97 171.43 0.00 1.23 0.00 16 E5a_E6a KnownJunction 0 0.00 58.74 80.57 0.00 0.00 13.17 26.98 14.58 133.01 13.83 9.79 0.00 0.00 0.00 0.00 0.00 0.00 185.96 27.20 150.33 0.00 2.57 0.00 17 ER6a ExonRegion 0 0.00 64.95 79.22 0.00 0.62 9.78 35.71 14.24 115.97 9.69 8.51 0.00 0.00 0.00 0.00 0.00 0.00 235.31 27.70 166.71 0.00 0.10 0.00 18 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 0.00 0.00 0.00 19 E6a_E8a KnownJunction 0 0.00 80.31 68.00 0.00 0.00 7.72 46.99 18.03 120.80 9.48 8.05 0.00 0.00 0.00 0.00 0.00 0.00 203.58 25.88 185.94 0.00 0.00 0.00 20 ER7a ExonRegion 0 0.00 0.89 0.80 0.00 0.00 0.00 1.15 0.00 0.80 0.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.00 0.00 0.00 0.00 21 ER8a ExonRegion 0 0.00 55.42 79.87 0.69 0.00 10.38 34.22 16.16 108.20 11.52 12.81 0.00 0.00 0.00 1.22 0.00 0.00 204.17 31.70 168.60 0.00 0.00 0.00 22 E8a_E9a KnownJunction 0 0.00 64.07 92.60 2.06 0.00 26.01 29.54 13.27 109.81 10.48 4.42 0.00 0.00 0.00 4.70 0.00 0.00 208.01 24.38 198.78 0.00 0.00 0.00 23 ER9a ExonRegion 0 0.00 75.38 95.93 1.91 0.93 12.07 31.81 17.79 108.91 12.15 7.58 0.00 0.00 0.00 0.36 0.00 0.00 234.14 21.15 171.66 0.00 0.00 0.00 24 E9a_E10a KnownJunction 0 0.00 83.80 99.97 1.73 0.00 27.20 45.75 21.77 93.20 11.09 8.69 0.00 0.00 0.00 5.19 0.00 0.00 204.45 37.93 211.18 0.00 0.00 0.00 25 ER10a ExonRegion 0 2.82 77.49 87.11 2.12 0.02 13.12 35.79 17.73 119.16 12.51 4.31 0.00 0.00 0.00 0.59 0.00 0.00 205.85 15.72 185.41 0.00 0.00 0.00 26 E10a_E11b KnownJunction 0 0.00 74.66 99.82 1.90 0.00 13.06 22.30 6.41 115.48 12.41 5.16 0.00 0.00 0.00 0.00 0.00 0.00 156.57 9.04 179.35 0.00 0.00 0.00 27 E10a_E13a NovelJunction 0 0.00 9.87 10.05 0.00 0.00 8.01 8.48 0.00 4.46 1.67 2.37 0.00 0.00 0.00 0.00 0.00 0.00 16.50 0.00 29.91 0.00 0.00 0.00 28 ER11a ExonRegion 0 0.00 22.37 29.41 0.45 0.00 6.72 6.18 3.46 34.99 3.82 1.29 0.00 0.00 0.00 0.00 0.00 0.00 55.43 2.12 57.45 0.00 0.00 0.00 29 ER11b ExonRegion 0 0.00 59.42 95.29 1.07 0.81 9.98 22.41 11.31 101.74 12.63 9.70 0.00 0.00 0.00 0.00 0.00 0.00 170.31 9.30 160.16 0.00 0.00 0.00 30 E11a_E12a KnownJunction 0 0.00 0.00 6.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E11a_E13a KnownJunction 0 0.00 70.45 94.38 3.23 3.74 15.62 28.18 6.45 89.67 12.22 12.11 0.00 0.00 0.00 0.00 0.00 0.00 159.64 8.85 162.22 0.00 0.00 0.00 32 ER12a ExonRegion 0 0.00 1.81 4.45 0.00 0.00 1.10 5.16 0.00 0.55 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.65 0.00 3.83 0.00 0.00 0.00 33 ER13a ExonRegion 0 1.05 72.14 119.13 1.18 1.24 13.78 32.47 13.08 111.61 9.35 12.39 0.00 0.00 0.00 0.00 0.00 0.00 179.11 16.27 148.44 0.00 0.00 0.00 34 E13_Da KnownBoundary 0 0.00 65.32 92.43 1.60 0.00 2.61 50.12 15.48 123.58 8.27 4.95 0.00 0.00 0.00 0.00 0.00 0.00 171.99 15.81 145.28 0.00 0.00 0.00 35 ER13b ExonRegion 0 0.96 107.26 180.74 1.23 2.92 17.97 44.84 13.98 92.61 9.05 5.30 0.00 0.00 0.00 0.00 0.00 0.00 104.58 13.21 87.01 0.00 0.11 0.08