Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IDS Gene 0 113.74 484.53 226.84 347.52 190.48 318.00 131.84 345.90 890.79 236.99 116.43 180.54 176.42 123.41 54.97 151.57 125.88 197.40 259.47 297.22 114.81 334.61 153.42 2 466323 Transcript 0 8.55 3.36 2.84 4.43 3.44 13.73 10.78 25.79 35.76 7.80 52.08 11.67 34.06 63.24 20.34 94.26 63.15 23.92 24.84 38.99 47.80 70.41 36.48 3 370441 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 340855 Transcript 0 51.73 201.36 89.42 139.22 80.10 164.86 66.75 135.34 357.77 93.94 41.05 75.65 73.37 55.84 25.67 77.17 48.44 106.71 131.32 123.64 43.05 139.54 81.40 5 370443 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 428056 Transcript 0 10.54 10.96 17.26 12.06 11.47 21.78 13.28 27.43 71.18 30.41 24.86 12.40 10.25 38.89 8.51 31.28 31.51 33.38 33.57 41.95 55.89 42.29 24.55 7 464251 Transcript 0 41.11 14.23 24.13 29.99 22.72 33.38 18.71 41.04 56.94 36.82 32.35 50.78 57.78 63.11 21.42 62.18 56.62 50.45 45.15 43.48 70.08 79.95 54.72 8 490775 Transcript 0 4.32 4.91 2.56 5.90 4.67 3.19 7.08 4.05 9.00 2.27 3.64 11.50 10.86 9.63 10.47 8.98 4.67 4.12 12.18 6.84 4.01 3.86 15.23 9 466019 Transcript 0 1.05 3.78 4.10 4.39 1.66 2.72 3.11 7.00 8.75 1.06 2.62 2.70 0.89 4.71 0.51 6.25 10.30 5.42 5.52 5.26 7.43 5.92 3.27 10 ER1a ExonRegion 0 0.45 0.15 0.88 0.00 0.00 5.50 0.28 0.00 0.00 0.00 3.45 0.00 0.00 1.51 0.00 1.27 4.72 1.45 15.24 1.98 9.29 0.15 7.55 11 ER1b ExonRegion 1 12.39 15.21 4.42 0.58 7.48 55.32 7.50 0.26 9.97 3.40 25.34 0.16 3.65 17.68 5.16 16.29 36.92 8.66 56.98 11.70 45.91 30.48 30.56 12 E1_Ac KnownBoundary 0 6.22 26.05 13.01 6.83 11.54 95.74 14.22 6.98 52.55 27.02 40.48 0.00 0.00 19.54 14.96 43.41 55.17 15.84 50.26 27.16 28.36 70.79 36.88 13 ER1c ExonRegion 0 5.39 18.68 35.22 37.00 9.53 50.81 11.24 59.83 243.62 76.14 99.28 40.22 42.42 90.02 42.25 131.13 97.96 199.26 180.28 180.75 130.89 135.44 117.09 14 E1a_E2a KnownJunction 1 9.85 53.28 94.14 93.59 55.52 157.24 52.86 195.35 848.34 237.08 252.80 43.36 74.18 241.04 152.91 386.82 264.14 608.00 690.75 620.57 351.39 482.03 391.39 15 ER2a ExonRegion 1 18.26 50.54 76.10 91.44 33.79 153.97 48.47 212.35 795.18 207.38 280.24 73.60 55.91 217.39 81.93 286.95 309.40 493.05 367.00 474.58 335.11 292.39 245.62 16 E2_Ab KnownBoundary 1 38.23 69.86 72.88 131.98 60.19 246.90 54.14 222.62 803.61 231.36 285.76 87.33 85.38 216.02 79.98 310.77 283.12 461.50 335.35 470.94 347.81 264.16 127.62 17 ER2b ExonRegion 1 54.93 93.87 87.12 135.67 26.63 191.28 59.28 189.04 836.69 247.19 268.49 78.49 105.00 245.37 76.37 278.13 243.84 543.77 358.71 472.78 336.10 314.21 208.55 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2a_E5a NovelJunction 0 0.00 0.00 1.83 1.37 3.74 0.00 1.81 2.51 5.79 0.00 0.00 0.00 0.00 12.18 4.45 0.00 3.65 4.39 0.00 0.00 22.43 27.13 0.00 20 ER3a ExonRegion 0 26.93 137.71 80.45 127.10 26.13 214.81 86.75 161.64 790.95 233.17 247.58 138.25 173.72 277.15 109.74 323.85 347.14 403.73 520.59 572.53 336.45 444.42 263.03 21 E3_Ab KnownBoundary 0 32.38 179.57 120.75 143.37 26.91 399.20 116.90 243.90 956.21 277.35 233.85 119.89 150.48 234.86 95.06 412.63 347.64 597.43 439.73 587.59 257.74 463.48 265.05 22 ER3b ExonRegion 0 28.02 122.74 124.67 176.37 79.60 322.27 96.77 249.81 1106.53 284.63 211.50 142.47 151.32 315.76 98.34 350.20 318.15 566.94 478.35 538.86 247.05 455.69 290.53 23 E3_Da KnownBoundary 0 39.27 12.10 56.68 32.83 12.22 17.77 14.62 53.07 72.22 80.26 21.69 31.21 14.93 57.51 11.13 31.87 48.25 42.86 75.77 71.84 72.53 42.43 19.97 24 E3a_E4a KnownJunction 0 19.86 0.00 6.45 18.11 15.53 26.69 8.44 16.76 26.68 19.88 7.53 28.06 32.63 30.31 0.00 24.69 54.42 12.15 8.47 12.59 42.69 60.99 50.62 25 E3a_E5a KnownJunction 0 38.75 119.19 162.38 236.87 133.19 276.43 102.68 302.18 1296.28 354.17 359.04 179.91 179.37 342.16 166.27 354.01 406.26 730.95 647.92 727.12 291.16 453.01 378.84 26 ER3c ExonRegion 0 10.54 10.96 17.26 12.06 11.47 21.78 13.28 27.43 71.18 30.41 24.86 12.40 10.25 38.89 8.51 31.28 31.51 33.38 33.57 41.95 55.89 42.29 24.55 27 E3_Db NovelBoundary 1 54.82 62.29 37.46 40.95 50.93 40.77 58.60 61.98 169.04 56.87 35.64 33.46 23.38 59.57 8.90 68.27 43.38 17.20 82.36 40.27 52.57 119.53 46.27 28 Ix Intron 0 23.56 36.69 18.94 31.16 23.43 30.51 25.61 45.36 107.99 44.50 32.16 47.94 30.20 43.87 9.88 49.78 37.09 54.92 50.95 63.45 87.83 79.69 41.25 29 Ix_AR1 ActiveIntronRegion 0 23.60 36.77 18.98 31.22 23.48 30.58 25.66 45.46 108.22 44.60 32.23 48.04 30.26 43.97 9.90 49.87 37.17 55.03 51.06 63.58 88.02 79.86 41.34 30 E4_Aa NovelBoundary 0 31.19 21.90 37.02 41.89 59.68 35.83 23.85 65.06 170.22 55.58 53.70 68.42 20.29 61.63 10.75 39.22 53.30 83.40 110.59 80.47 134.24 152.59 60.35 31 ER4a ExonRegion 0 59.02 33.62 35.55 41.12 32.68 62.83 35.63 66.81 96.26 52.26 60.31 85.41 73.17 104.80 29.04 71.79 81.50 67.61 82.45 84.09 126.90 102.25 73.84 32 E4_Da NovelBoundary 0 29.49 61.04 38.41 58.00 20.29 55.08 34.84 71.59 142.88 67.15 18.64 73.07 54.38 22.07 4.45 76.13 25.99 94.68 68.24 59.76 133.07 124.92 79.64 33 E4a_E5a KnownJunction 0 44.45 9.08 30.40 30.73 19.95 10.62 12.06 39.55 47.89 38.33 29.22 38.86 67.53 54.21 35.23 90.06 33.94 71.59 44.52 33.75 40.65 76.60 39.69 34 Ix Intron 0 14.13 16.53 11.41 16.51 15.11 28.56 16.20 29.75 69.61 30.71 24.98 15.02 20.07 30.34 7.55 41.71 28.53 43.07 39.79 42.05 72.97 47.06 24.12 35 Ix_AR3 ActiveIntronRegion 0 14.13 17.98 13.06 19.39 13.98 29.84 16.40 37.55 83.28 37.63 25.68 16.14 26.74 33.45 7.50 49.43 29.30 54.44 46.56 50.08 86.91 51.68 28.39 36 Ix_SR1 SilentIntronRegion 0 20.48 20.36 16.23 19.49 24.52 38.44 16.76 20.79 77.08 30.97 32.15 20.54 6.91 40.12 10.00 37.23 34.39 32.39 43.65 40.89 75.70 59.94 21.95 37 ER5a ExonRegion 0 23.45 58.04 117.72 156.52 55.83 130.92 58.85 209.36 893.38 249.16 209.99 109.31 159.62 206.85 70.61 236.27 318.11 491.77 372.83 429.07 228.59 336.13 233.38 38 E5a_E6a KnownJunction 0 0.00 0.00 3.58 5.16 0.00 0.00 0.00 0.00 5.96 1.29 0.00 6.30 13.96 0.00 4.45 0.00 0.00 0.00 0.00 0.00 2.35 0.00 7.43 39 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E6_Aa NovelBoundary 0 1037.52 778.55 638.21 765.17 886.16 610.50 1399.12 835.45 735.61 717.29 206.37 255.53 332.61 176.00 252.30 653.42 423.28 536.82 450.84 651.57 294.06 214.13 628.10 41 ER6a ExonRegion 0 10.23 12.30 2.99 8.03 14.02 9.58 19.61 7.19 11.89 2.36 5.92 15.15 12.28 17.81 22.50 15.50 10.56 5.63 24.22 20.52 9.67 11.59 27.67 42 E6_Da NovelBoundary 0 710.20 520.43 333.67 295.00 457.47 301.02 631.13 359.89 309.40 286.32 162.78 181.71 250.80 172.41 149.70 394.00 420.94 304.72 347.40 668.06 303.70 147.63 421.61 43 E6a_E7a KnownJunction 0 2.74 2.43 1.12 4.53 0.00 0.00 1.63 4.97 9.14 3.17 5.00 13.05 6.33 11.07 4.45 11.45 3.46 6.72 12.33 0.00 0.00 0.00 10.59 44 ER7a ExonRegion 0 10.94 40.19 61.18 74.80 10.13 74.71 39.72 141.73 552.57 151.77 121.59 78.14 123.28 132.95 42.21 142.24 177.38 194.41 268.33 353.80 124.72 241.09 176.13 45 E7_Ab KnownBoundary 0 31.64 69.26 75.07 103.28 33.79 96.14 47.61 177.07 601.64 167.16 192.00 92.13 118.34 181.88 44.75 201.23 180.08 325.16 293.28 364.90 122.01 242.91 223.22 46 ER7b ExonRegion 1 29.07 106.03 33.49 42.23 41.31 224.59 73.51 54.25 196.73 43.98 23.01 48.22 64.13 67.01 41.00 79.74 30.02 119.42 74.97 88.17 22.38 101.73 82.39 47 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER8a ExonRegion 0 29.58 59.39 5.15 5.23 18.54 56.72 23.38 17.20 23.69 6.11 26.21 7.60 8.78 38.10 16.76 45.00 24.80 14.73 15.44 16.82 28.04 29.02 21.57 49 E8a_E9a KnownJunction 0 0.00 0.00 1.71 2.06 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 2.47 0.00 0.00 7.95 0.00 0.00 0.00 3.15 0.00 0.00 50 E8a_E10a KnownJunction 0 13.56 2.96 0.00 5.99 8.23 12.55 6.23 20.09 29.05 8.25 31.64 41.41 6.17 58.27 27.81 63.23 39.36 19.28 4.14 31.19 37.25 41.94 35.25 51 E8a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER9a ExonRegion 0 2.11 7.55 6.49 6.72 3.31 5.45 6.23 14.00 15.71 2.12 5.24 5.40 1.78 6.95 1.01 12.51 12.66 10.84 11.04 10.51 11.70 11.84 6.54 53 ER10a ExonRegion 0 15.45 4.95 5.51 2.63 4.82 7.98 8.94 23.80 36.97 9.77 59.24 27.28 15.79 71.33 16.73 71.03 70.31 28.67 21.13 30.35 59.13 31.88 35.44 54 E10_Da KnownBoundary 0 9.93 0.00 10.05 0.00 8.15 10.22 7.77 34.87 51.65 13.30 71.86 19.66 28.41 74.11 27.81 69.55 65.08 31.50 38.68 29.79 69.38 39.68 34.40 55 ER10b ExonRegion 0 10.73 3.37 3.89 3.06 2.71 11.84 11.90 28.91 37.99 9.88 59.20 10.89 33.70 66.61 22.88 107.08 62.91 23.97 22.21 42.19 57.04 72.48 35.66 56 E10b_E11a KnownJunction 0 6.37 3.35 1.80 5.79 4.16 15.62 9.67 22.67 33.54 5.72 44.96 12.45 34.41 59.86 17.80 81.43 63.39 23.88 27.48 35.79 38.55 68.34 37.30 57 ER11a ExonRegion 0 58.15 84.74 9.09 16.23 8.11 34.84 16.12 32.54 42.46 12.59 44.20 21.03 11.08 52.06 16.52 48.75 40.68 46.35 15.15 25.82 45.27 52.53 26.11 58 E11a_E12a KnownJunction 0 16.74 0.00 23.42 18.85 29.46 43.10 0.00 28.92 38.92 12.38 31.85 49.67 20.13 31.55 18.79 35.20 27.58 8.83 36.99 8.95 24.46 75.44 40.89 59 E11a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 ER12a ExonRegion 0 18.11 11.22 19.33 21.91 24.58 41.77 12.21 37.00 41.67 15.67 43.10 48.75 21.71 42.47 25.47 32.91 33.74 8.28 30.56 16.00 28.08 90.98 30.67 61 ER12b ExonRegion 0 13.60 15.12 10.20 16.35 11.12 12.22 12.00 32.05 33.17 11.94 21.40 23.15 24.82 19.41 10.58 19.26 14.56 1.16 11.36 12.16 12.65 49.51 12.97 62 ER12c ExonRegion 0 5.69 8.48 5.79 5.36 2.40 5.31 7.30 10.37 4.81 1.74 5.53 8.06 11.97 8.68 6.30 4.82 2.62 0.00 2.86 2.64 3.57 22.63 4.76 63 ER13a ExonRegion 1 51.72 123.32 42.85 70.96 53.78 233.98 89.98 67.37 236.41 60.39 24.96 58.35 56.71 80.19 36.33 130.19 47.86 197.75 201.52 120.57 45.21 122.45 138.56 64 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER14a ExonRegion 0 155.21 682.10 314.84 485.92 266.63 425.47 177.01 474.00 1194.66 315.36 139.26 244.26 236.76 143.18 66.35 178.49 145.89 229.07 323.74 374.00 127.00 435.72 187.02