Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPC3 Gene 0 174.92 12.13 18.93 9.55 20.94 20.91 21.67 20.16 7.76 8.78 0.00 0.00 0.00 0.00 3.33 0.00 0.00 16.31 71.37 2.84 100.88 66.72 27.74 2 370818 Transcript 0 3.76 0.07 1.57 0.00 2.68 0.92 1.19 3.17 0.00 0.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 0.59 1.23 0.18 3 394299 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 4 406757 Transcript 0 0.83 0.00 0.00 0.00 0.00 0.00 0.91 0.00 0.00 0.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.44 0.00 5 ER1a ExonRegion 0 0.00 0.14 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.90 0.00 0.93 0.38 0.35 6 E1_Ab KnownBoundary 0 0.00 3.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 7 ER1b ExonRegion 0 22.89 2.79 1.93 1.56 2.51 5.80 2.35 1.59 1.60 2.38 0.00 0.00 0.00 0.00 0.29 0.00 0.00 12.31 18.68 0.00 57.07 15.04 12.82 8 E1a_E2a KnownJunction 0 46.90 9.67 13.93 8.89 28.69 13.46 9.85 8.54 4.48 5.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.20 52.99 0.00 112.93 33.56 13.06 9 ER2a ExonRegion 0 59.01 7.48 11.34 11.20 16.40 32.08 14.42 24.48 6.97 6.65 0.00 0.00 0.00 0.00 3.40 0.00 0.00 28.58 75.01 1.63 137.80 62.72 27.37 10 E2a_E3a KnownJunction 0 156.84 11.58 22.94 15.62 15.28 45.66 18.42 36.84 11.52 7.55 0.00 0.00 0.00 0.00 5.07 0.00 0.00 44.81 105.60 3.26 181.13 94.05 40.46 11 ER3a ExonRegion 0 112.53 9.21 15.86 13.00 20.61 26.76 22.44 22.66 12.07 13.15 0.00 0.00 0.00 0.00 6.00 0.00 0.00 29.51 103.54 4.21 163.51 87.96 41.50 12 E3_Ab KnownBoundary 0 128.02 2.76 25.01 15.35 28.86 18.80 37.14 25.47 13.57 9.37 0.00 0.00 0.00 0.00 4.45 0.00 0.00 29.43 73.60 2.43 118.61 90.38 45.41 13 ER3b ExonRegion 0 140.75 12.76 24.17 11.47 30.24 26.40 26.15 19.59 12.26 13.93 0.00 0.00 0.00 0.00 5.30 0.00 0.00 20.43 90.81 2.93 111.16 78.97 34.07 14 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E3a_E5a KnownJunction 0 234.19 21.77 34.83 9.09 19.02 24.13 24.42 22.10 20.17 17.49 0.00 0.00 0.00 0.00 10.01 0.00 0.00 20.27 140.05 6.07 75.18 100.55 49.94 16 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.00 17 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER5a ExonRegion 0 285.13 23.37 28.05 13.08 39.54 23.18 37.26 24.38 12.10 11.94 0.00 0.00 0.00 0.00 3.12 0.00 0.00 13.58 111.77 3.10 100.10 93.60 45.34 19 E5a_E6a KnownJunction 0 448.60 23.09 23.21 11.95 40.32 23.45 41.51 22.67 10.07 12.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.95 89.51 3.26 95.20 95.46 22.45 20 ER6a ExonRegion 0 262.25 27.55 33.09 17.28 41.37 28.25 41.49 21.45 9.61 10.23 0.00 0.00 0.00 0.00 2.76 0.00 0.00 10.82 100.04 3.80 131.12 81.82 41.37 21 E6a_E7a KnownJunction 0 256.49 24.47 33.82 8.92 34.13 44.46 43.59 31.46 6.16 17.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.55 89.51 0.00 161.79 67.79 33.80 22 ER7a ExonRegion 0 248.05 25.23 38.23 16.83 55.13 46.25 45.79 28.64 14.06 14.43 0.00 0.00 0.00 0.00 6.21 0.00 0.00 17.16 114.65 5.82 155.30 95.41 32.13 23 E7a_E8a KnownJunction 0 345.47 19.14 51.15 25.64 59.34 51.67 48.14 41.90 11.95 18.53 0.00 0.00 0.00 0.00 4.45 0.00 0.00 17.78 108.80 3.26 160.62 77.34 17.93 24 ER8a ExonRegion 0 426.00 26.91 51.17 19.91 45.62 35.77 49.43 44.30 11.50 15.02 0.00 0.00 0.00 0.00 3.95 0.00 0.00 24.68 111.03 5.64 194.34 94.11 42.45 25 E8_Da KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E8a_E9a KnownJunction 0 565.06 28.35 51.33 21.31 65.53 25.27 42.35 36.15 8.42 9.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.51 59.67 2.68 170.38 55.29 35.60 27 ER8b ExonRegion 0 0.83 0.00 0.00 0.00 0.00 0.00 0.91 0.00 0.00 0.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.44 0.00 28 ER9a ExonRegion 0 374.69 17.54 28.05 10.49 22.66 23.79 28.48 34.17 8.36 10.03 0.00 0.00 0.00 0.00 4.06 0.00 0.00 13.69 84.53 4.26 89.27 104.44 31.16 29 ER9b ExonRegion 0 7.53 0.00 3.13 0.00 5.35 1.83 2.35 6.34 0.00 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.24 2.08 0.00