Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RBMX2 Gene 0 108.12 97.88 176.11 102.37 80.39 80.25 49.14 74.00 48.35 60.28 103.41 65.90 58.26 98.93 93.62 81.86 79.13 47.40 78.85 43.94 55.52 57.38 60.10 2 305536 Transcript 0 92.96 90.01 154.38 91.57 76.37 79.64 47.90 67.10 41.42 53.83 96.64 57.57 51.10 93.13 91.76 70.40 75.84 40.21 63.89 35.13 46.90 54.88 53.76 3 469953 Transcript 0 4.24 2.25 5.08 2.47 3.45 1.83 1.62 2.76 3.94 6.23 7.71 0.02 2.52 9.44 7.57 10.63 9.39 7.65 18.98 5.44 8.08 9.13 15.10 4 370947 Transcript 0 1.67 9.92 12.95 18.11 6.92 14.36 6.86 11.66 12.52 10.13 10.91 7.14 7.33 12.80 3.65 10.21 10.88 12.86 17.65 13.88 12.79 9.65 12.24 5 487274 Transcript 0 50.85 49.28 36.90 49.26 22.18 34.52 17.26 17.62 22.32 19.98 13.65 12.75 6.10 8.28 6.62 7.06 7.33 10.02 11.63 15.96 11.37 15.30 10.70 6 ER1a ExonRegion 1 35.02 16.95 10.62 5.29 25.05 34.62 13.04 2.78 2.81 2.99 30.69 1.44 0.99 17.37 28.05 32.06 24.41 12.60 16.41 6.90 9.08 8.90 33.19 7 E1_Ab KnownBoundary 0 6.59 0.00 2.69 0.00 0.00 11.13 0.00 2.51 1.77 0.00 4.95 0.00 0.00 5.36 0.00 0.00 21.97 0.00 0.00 0.00 2.72 2.82 3.93 8 E1_Ac KnownBoundary 1 136.02 64.92 24.95 15.92 86.42 120.90 47.83 6.90 2.63 5.94 100.82 6.30 6.17 53.45 59.09 116.21 70.22 30.84 53.08 29.47 36.26 35.52 127.11 9 ER1b ExonRegion 1 467.22 224.20 96.50 44.29 259.55 236.56 85.06 36.30 33.97 37.27 212.62 4.33 4.69 88.92 216.14 291.27 133.69 91.46 191.12 82.45 86.50 86.99 249.61 10 ER1c ExonRegion 1 648.18 313.93 145.24 72.79 342.75 313.24 126.89 54.82 50.91 63.94 320.92 7.58 12.60 222.10 378.98 439.60 228.90 134.83 335.06 116.29 156.19 132.37 376.72 11 E1_Da KnownBoundary 0 6.67 5.66 2.99 3.83 7.22 2.33 2.03 0.00 3.50 15.20 10.63 0.00 6.82 16.95 21.76 26.57 4.21 17.00 67.39 9.65 13.71 27.31 52.16 12 E1a_E1d KnownJunction 1 1097.01 491.62 237.51 115.57 532.26 416.81 198.56 89.58 76.07 92.78 404.47 6.30 13.15 320.86 367.02 598.48 308.74 173.28 483.12 158.83 210.17 159.02 484.61 13 ER1d ExonRegion 0 4.24 2.25 5.08 2.47 3.45 1.83 1.62 2.76 3.94 6.23 7.71 0.02 2.52 9.44 7.57 10.63 9.39 7.65 18.98 5.44 8.08 9.13 15.10 14 E1_Ad KnownBoundary 0 5.85 0.00 8.22 1.56 0.00 0.00 0.00 4.39 1.62 2.58 7.00 0.00 0.00 19.42 5.19 7.52 11.97 13.51 9.22 3.26 7.41 6.25 23.22 15 ER1e ExonRegion 1 175.25 70.73 118.59 53.41 62.36 58.92 31.74 47.42 32.46 47.21 128.16 14.95 18.07 62.63 65.82 92.68 92.11 61.49 76.45 41.72 75.19 36.43 75.13 16 E1b_E2a KnownJunction 1 53.57 28.74 160.61 51.54 8.32 29.59 18.20 59.48 35.21 49.64 267.28 24.76 19.80 40.67 35.11 29.14 210.94 25.54 49.41 52.60 147.46 16.72 3.24 17 ER2a ExonRegion 1 37.53 49.98 238.08 91.79 20.74 27.15 31.67 88.55 54.01 77.42 286.11 70.35 30.49 143.67 131.67 163.81 233.09 70.21 165.33 101.92 127.65 70.12 143.95 18 E2_Da KnownBoundary 0 3.19 0.00 6.03 17.35 4.24 0.00 6.40 14.70 25.23 15.39 22.37 12.60 0.00 26.08 0.00 27.69 8.13 14.55 31.25 31.83 12.36 14.51 38.07 19 E2a_E3a KnownJunction 1 62.23 103.07 271.96 117.03 36.84 40.43 48.23 101.25 43.32 92.14 185.52 153.80 107.95 292.31 305.46 462.19 120.15 103.47 412.15 110.13 74.32 177.09 422.63 20 E2a_E4b NovelJunction 0 3.04 0.00 17.27 3.50 0.00 0.00 0.00 2.09 2.66 1.48 5.00 0.00 0.00 0.00 0.00 0.00 3.74 0.00 22.12 3.20 0.00 0.00 0.00 21 ER2b ExonRegion 0 1.67 9.92 12.95 18.11 6.92 14.36 6.86 11.66 12.52 10.13 10.91 7.14 7.33 12.80 3.65 10.21 10.88 12.86 17.65 13.88 12.79 9.65 12.24 22 E2_Db NovelBoundary 0 0.00 5.85 19.22 17.78 0.00 13.86 8.21 18.03 14.26 9.37 12.69 0.00 8.28 9.54 4.45 3.67 12.25 21.06 14.21 15.21 14.89 14.63 0.00 23 I2_SR1 SilentIntronRegion 0 3.47 11.25 9.71 13.08 10.48 14.33 8.06 10.37 13.89 9.49 8.34 8.88 12.86 12.58 2.10 9.75 5.32 9.08 6.46 9.04 7.60 8.49 8.11 24 E3_Aa NovelBoundary 0 41.12 40.98 14.87 17.45 18.76 36.68 23.36 14.50 35.33 21.89 9.63 31.06 12.82 28.72 17.80 3.25 0.00 10.53 4.42 20.45 5.81 22.66 16.05 25 ER3a ExonRegion 1 141.99 112.54 301.93 137.46 205.64 150.95 93.88 108.72 61.26 84.27 171.75 94.08 101.49 172.81 210.81 243.69 108.50 101.04 151.75 84.04 73.42 84.00 156.61 26 E3_Da NovelBoundary 0 7.33 19.27 11.89 24.91 8.40 22.49 8.44 19.59 30.21 7.25 21.53 12.60 6.17 25.96 0.00 0.00 0.00 4.48 8.47 12.02 8.90 10.53 15.45 27 E3a_E4b KnownJunction 1 121.21 187.60 343.60 134.88 233.53 208.69 165.96 117.14 63.92 86.15 239.17 18.01 91.71 104.60 80.60 65.54 100.79 34.28 68.24 57.46 73.21 38.21 47.80 28 I3 Intron 0 10.60 22.43 15.33 33.02 15.91 26.37 12.81 14.93 21.20 16.79 12.66 7.88 8.27 8.12 3.90 3.69 4.72 7.40 5.40 10.09 14.01 15.06 14.81 29 I3_AR1 ActiveIntronRegion 0 5.60 22.68 15.46 23.03 14.69 26.04 13.63 7.50 10.68 14.95 10.66 3.79 4.27 9.35 1.25 3.33 5.05 6.30 4.19 8.85 16.08 17.60 10.45 30 I3_SR1 SilentIntronRegion 0 7.05 21.52 12.47 35.18 16.24 34.04 14.98 20.49 23.15 19.73 16.66 13.25 14.95 10.24 3.19 5.01 5.85 10.44 7.27 9.74 15.91 16.94 19.04 31 I3_AR2 ActiveIntronRegion 0 6.04 15.72 10.69 22.19 15.95 21.90 11.71 11.74 19.32 15.63 10.16 5.87 4.12 6.82 3.43 1.22 4.64 5.77 6.05 10.25 13.03 13.21 12.70 32 I3_SR2 SilentIntronRegion 0 22.63 30.86 23.74 48.42 16.24 22.78 11.09 16.37 27.13 15.80 12.01 6.29 7.49 6.46 6.76 5.15 3.34 6.38 3.22 11.07 11.78 13.55 14.85 33 E4_Aa NovelBoundary 0 62.90 46.18 37.20 72.15 44.57 22.43 24.69 26.41 28.30 34.30 14.58 7.65 13.64 12.01 0.00 12.30 13.18 15.59 4.80 16.94 5.87 23.70 20.06 34 ER4a ExonRegion 0 50.85 49.28 36.90 49.26 22.18 34.52 17.26 17.62 22.32 19.98 13.65 12.75 6.10 8.28 6.62 7.06 7.33 10.02 11.63 15.96 11.37 15.30 10.70 35 E4_Ab KnownBoundary 0 69.72 41.11 63.78 63.53 41.94 61.67 20.67 33.48 31.05 22.94 14.21 12.60 6.82 2.35 0.00 8.03 16.64 14.09 0.00 11.31 19.09 20.15 0.00 36 ER4b ExonRegion 0 289.89 212.81 391.05 199.74 123.81 151.80 79.06 129.06 91.19 97.86 159.37 172.34 139.95 162.47 133.44 130.20 112.66 76.88 136.43 66.02 89.28 72.72 87.18 37 E4b_E5a KnownJunction 0 3.26 2.83 2.37 0.00 9.76 6.53 3.36 0.00 1.62 0.00 3.90 16.66 0.00 6.42 13.35 3.16 7.57 0.00 8.09 4.92 5.07 0.00 0.00 38 ER4c ExonRegion 1 61.38 28.47 73.52 25.89 45.49 31.17 18.54 17.28 6.18 14.91 27.06 51.95 18.76 42.23 40.62 17.83 26.41 5.54 22.30 23.40 11.02 6.25 11.75 39 ER5a ExonRegion 0 30.66 24.81 44.92 23.05 31.65 20.70 15.24 11.70 10.87 12.42 20.32 47.75 33.23 34.80 39.21 28.11 33.95 8.45 27.94 13.37 14.86 19.29 24.67 40 E5_Da KnownBoundary 1 92.53 74.00 86.51 59.27 84.21 53.55 47.43 23.66 23.29 22.56 66.91 129.49 98.86 96.59 116.08 80.58 83.22 18.78 81.70 31.06 42.01 58.60 73.41 41 ER5b ExonRegion 0 150.90 163.08 298.13 177.85 127.68 124.66 82.75 131.42 80.03 104.67 162.59 113.70 101.21 168.88 155.48 108.73 127.27 67.81 111.36 63.36 84.72 100.85 74.32 42 IG32_SR1 SilentIntergenicRegion 0 5.67 10.29 20.83 9.12 11.89 15.89 6.79 11.87 11.29 11.34 6.72 2.71 1.37 7.83 4.61 4.23 3.20 4.08 7.99 6.55 3.39 7.12 5.62