Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	MCTS1	Gene	0	93.26	194.68	169.61	141.02	135.84	59.93	73.62	75.55	72.75	103.69	176.32	174.27	95.82	130.42	176.19	119.89	113.22	49.68	73.75	143.85	51.46	85.39	45.37
2	493879	Transcript	0	3.08	1.07	2.38	2.99	0.03	2.41	0.37	0.75	2.64	4.96	0.00	0.92	0.00	0.00	0.48	0.00	0.00	1.37	5.08	2.65	1.93	5.24	5.56
3	493274	Transcript	0	0.00	0.00	2.63	5.73	0.00	2.67	0.00	0.00	1.22	5.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.80	6.01	2.35	0.00	4.35
4	371317	Transcript	1	127.50	252.94	148.37	81.67	174.62	71.44	75.23	55.92	53.17	78.42	220.09	70.40	58.31	106.94	127.19	114.26	133.10	45.77	58.17	144.88	97.12	58.40	56.61
5	371315	Transcript	0	11.46	125.66	34.84	76.98	14.95	16.96	10.20	33.70	51.65	51.22	10.93	4.77	4.50	4.71	10.43	13.55	1.71	12.39	3.42	42.55	10.66	9.25	1.64
6	487133	Transcript	0	14.59	45.06	29.32	22.75	20.58	8.10	8.70	11.57	11.77	16.36	40.75	19.21	18.28	15.58	18.69	17.26	21.10	5.59	4.84	26.53	15.98	11.23	5.80
7	484481	Transcript	0	3.25	3.16	7.20	8.09	5.97	2.88	4.29	10.61	5.80	4.84	22.45	14.69	37.60	26.31	16.69	16.74	25.91	2.97	2.80	20.10	3.74	9.33	7.54
8	ER1a	ExonRegion	0	0.00	1.98	0.02	3.27	0.00	0.00	0.02	1.63	0.00	3.27	0.00	0.60	0.00	0.00	1.45	0.00	0.00	1.13	3.05	3.16	0.00	0.00	0.00
9	E1_Ab	KnownBoundary	0	0.00	6.25	0.00	6.69	0.00	0.00	0.00	1.64	0.00	5.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.57	4.52	0.00	0.00	0.00	0.00
10	ER1b	ExonRegion	0	7.44	3.59	3.56	11.78	2.12	5.56	1.41	0.76	4.76	7.59	0.00	1.68	0.00	0.00	2.42	0.00	0.00	3.23	9.77	8.61	6.97	3.80	2.89
11	E1a_E2a	KnownJunction	0	2.89	0.00	4.49	2.03	0.00	2.78	0.00	0.00	4.60	6.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.66	3.20	2.66	9.19	8.71
12	E1a_E2b	KnownJunction	0	0.00	0.00	2.63	5.73	0.00	2.67	0.00	0.00	1.22	5.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.80	6.01	2.35	0.00	4.35
13	E2_Aa	NovelBoundary	0	0.00	0.00	1.80	11.49	0.00	2.90	0.00	4.93	5.12	4.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	19.07	4.24	0.00	5.81	0.00	13.83
14	E2_Ab	NovelBoundary	0	14.00	6.31	11.47	33.66	3.99	11.36	22.61	28.30	19.44	13.00	2.58	0.00	0.00	0.00	0.00	11.45	13.65	48.42	0.00	18.54	16.74	3.12	4.35
15	ER2a	ExonRegion	0	6.35	1.23	2.63	3.65	0.10	4.45	1.09	0.62	3.31	5.45	0.00	2.16	0.00	0.00	0.00	0.00	0.00	2.97	3.53	1.60	3.15	6.55	7.97
16	ER2b	ExonRegion	0	14.85	3.15	3.11	10.58	4.69	9.84	0.89	0.98	7.47	4.61	0.86	2.63	0.00	0.71	2.26	2.59	0.45	2.45	3.54	5.69	8.02	1.32	4.94
17	E2a_E5b	KnownJunction	0	6.00	2.83	3.05	5.39	0.00	11.53	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	4.45	0.00	4.39	0.00	0.00	2.62	0.00	0.00	0.00
18	I2_AR1	ActiveIntronRegion	0	6.54	9.56	1.63	3.89	19.65	14.22	12.99	0.00	2.98	0.93	2.86	0.67	0.00	3.57	10.41	1.68	1.87	3.90	21.38	6.69	9.11	0.53	3.30
19	E3_Aa	NovelBoundary	0	83.50	37.76	43.26	49.64	54.84	54.68	40.67	7.64	16.12	11.98	21.27	0.00	7.63	14.48	32.88	60.41	22.07	34.20	61.08	38.22	24.96	5.88	38.16
20	ER3a	ExonRegion	1	174.11	263.00	126.78	57.48	220.00	96.48	114.79	34.58	30.10	53.87	189.06	13.80	26.50	144.06	172.25	205.35	139.64	76.61	121.06	104.67	109.08	60.40	105.35
21	E3a_E5b	KnownJunction	1	167.96	464.00	271.31	113.07	254.41	93.92	77.68	90.03	72.16	125.66	445.17	105.48	91.07	144.80	171.46	112.11	233.10	47.88	43.30	249.09	175.26	94.73	54.46
22	ER4a	ExonRegion	0	11.89	93.13	11.04	28.89	22.00	15.75	12.31	16.27	20.41	20.46	4.90	3.24	1.05	2.05	3.79	7.28	3.42	9.62	6.85	27.26	5.62	4.24	3.29
23	E4a_E5b	KnownJunction	0	11.04	158.20	58.63	125.06	7.89	18.17	8.08	51.14	82.90	81.98	16.95	6.30	7.95	7.36	17.06	19.82	0.00	15.17	0.00	57.85	15.69	14.27	0.00
24	ER5a	ExonRegion	0	35.45	133.71	77.50	60.99	50.17	24.30	17.21	29.82	33.04	46.45	115.97	46.54	31.66	36.14	45.69	37.15	55.29	15.24	11.15	68.08	47.93	27.61	14.68
25	ER5b	ExonRegion	0	150.96	361.60	536.54	417.16	353.15	158.12	170.64	221.57	215.50	296.02	530.86	432.52	280.20	397.74	519.94	415.10	341.62	151.28	183.91	406.51	131.18	254.05	152.86
26	E5a_E6a	KnownJunction	1	376.81	669.95	566.92	585.87	875.13	459.56	571.82	294.34	257.95	451.63	417.37	781.90	265.08	384.90	589.41	324.02	219.07	117.89	220.90	640.19	68.63	350.38	82.38
27	ER6a	ExonRegion	0	315.14	887.45	634.53	551.17	781.41	358.19	512.30	249.73	245.06	338.85	565.51	700.03	365.90	377.05	630.17	284.09	323.37	93.06	196.28	485.99	100.08	301.03	105.67
28	E6_Da	KnownBoundary	0	432.37	1212.42	668.43	540.89	589.64	235.32	388.32	241.84	234.55	343.73	590.57	809.21	385.85	425.16	718.22	324.96	417.86	92.15	207.16	507.76	108.79	312.05	122.92
29	ER6b	ExonRegion	0	378.59	1003.72	522.04	429.58	421.97	157.43	233.58	206.85	211.91	327.96	576.00	644.66	371.68	448.42	645.75	293.27	386.87	99.32	161.02	446.22	112.28	319.51	107.48
30	E6b_E7a	KnownJunction	0	519.43	1247.87	494.31	444.00	415.37	173.59	226.95	216.13	228.33	402.28	483.07	608.30	257.94	500.62	682.74	268.82	355.21	137.50	168.76	505.27	135.23	349.83	101.41
31	E6b_E9a	NovelJunction	0	0.00	6.05	4.73	3.70	0.00	0.00	0.00	0.00	3.18	1.34	7.32	11.70	0.00	2.47	0.00	0.00	4.77	0.00	3.67	3.26	0.00	8.14	0.00
32	ER7a	ExonRegion	0	331.55	681.48	573.57	470.28	305.53	124.60	140.60	251.68	222.94	345.82	614.36	773.29	395.26	481.33	680.76	310.30	383.20	144.88	206.07	468.15	175.75	296.84	96.12
33	E7_Da	KnownBoundary	0	13.19	5.66	9.49	7.46	12.22	0.00	28.35	7.23	4.11	9.00	12.32	18.16	26.62	22.49	14.09	20.25	20.94	1.74	7.62	9.01	0.00	6.06	11.78
34	E7a_E8b	KnownJunction	0	197.59	338.76	540.19	446.06	277.59	73.59	131.52	244.76	220.11	344.91	561.25	580.39	307.77	398.67	511.90	277.19	317.62	135.51	167.53	472.28	109.84	245.85	106.96
35	ER7b	ExonRegion	1	8.32	1.47	10.44	7.26	11.57	0.00	8.90	4.91	2.28	2.64	6.28	11.09	23.18	10.60	10.36	14.63	8.02	1.53	3.37	11.51	0.00	6.07	2.71
36	E7b_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	I7_AR1	ActiveIntronRegion	0	2.94	0.26	1.93	5.02	6.07	3.45	7.00	4.50	4.19	2.80	8.30	11.60	23.53	14.62	11.12	8.65	7.33	0.79	2.68	9.69	0.00	5.42	0.84
38	I7_SR2	SilentIntronRegion	0	8.60	1.25	5.47	5.16	1.50	2.45	13.20	4.39	3.49	3.28	15.61	22.72	33.89	16.90	11.32	14.54	14.23	0.00	2.33	10.96	0.90	0.47	1.11
39	ER8a	ExonRegion	1	3.25	3.16	7.20	8.09	5.97	2.88	4.29	10.61	5.80	4.84	22.45	14.69	37.60	26.31	16.69	16.74	25.91	2.97	2.80	20.10	3.74	9.33	7.54
40	E8_Ab	KnownBoundary	0	3.48	8.62	1.57	5.59	4.33	0.00	0.00	4.19	1.79	2.93	7.00	42.46	13.15	22.60	19.66	13.93	24.87	4.73	0.00	20.71	0.00	2.33	7.94
41	ER8b	ExonRegion	0	148.21	298.43	539.47	429.27	240.45	60.57	137.47	215.77	221.43	320.21	624.11	675.76	295.47	440.45	498.05	355.83	324.95	155.42	245.10	453.07	134.79	248.46	111.10
42	E8_Da	NovelBoundary	0	252.34	422.95	640.04	543.42	315.03	95.85	229.12	256.43	246.96	424.96	613.52	706.28	318.81	473.84	578.41	436.04	354.37	186.25	350.22	575.25	161.86	275.18	135.13
43	E8b_E9a	KnownJunction	1	161.58	497.94	643.71	513.19	417.49	157.47	208.09	315.45	274.01	454.72	513.29	942.61	234.89	562.37	848.14	375.03	311.83	214.44	285.09	616.80	175.63	325.64	148.79
44	ER8c	ExonRegion	0	126.24	306.74	553.59	426.01	287.08	73.41	131.71	243.88	213.91	313.84	542.77	680.01	245.55	455.59	568.46	352.15	294.53	146.39	274.66	396.64	143.03	251.64	102.31
45	E9_Aa	NovelBoundary	1	21.34	3.35	7.92	12.42	8.06	7.15	8.04	8.01	13.74	4.97	5.16	11.70	47.24	4.24	10.26	10.60	4.77	0.00	4.05	5.82	3.15	8.76	7.51
46	ER9a	ExonRegion	0	146.80	225.04	432.26	345.91	249.40	106.61	162.16	213.62	187.70	296.78	436.79	446.37	236.31	278.76	376.83	232.31	263.44	112.98	160.79	359.90	94.08	250.68	66.89
47	E9_Da	KnownBoundary	0	233.52	260.28	327.46	325.00	191.94	105.79	100.47	163.64	152.08	151.07	214.53	261.84	106.32	115.37	156.01	212.94	116.78	83.36	202.08	197.12	40.77	158.04	58.30
48	ER9b	ExonRegion	1	197.88	202.33	231.06	237.23	187.44	87.09	78.20	117.53	114.59	139.19	187.41	362.81	139.14	123.84	205.29	161.29	146.08	57.30	140.07	189.73	29.27	93.40	53.92
49	E9_Db	KnownBoundary	0	16.30	20.19	27.35	46.78	18.59	12.72	12.72	36.64	45.34	39.86	19.90	11.40	12.99	9.54	0.00	3.16	24.96	5.31	8.28	31.19	2.47	0.00	4.27
50	E9_Dc	KnownBoundary	0	12.22	6.38	23.06	44.98	25.04	13.63	24.02	19.59	30.87	40.13	8.84	24.46	0.00	4.59	20.52	22.81	14.96	2.24	4.71	27.10	5.31	8.14	3.24
51	ER9c	ExonRegion	1	61.38	50.84	71.07	118.57	61.54	47.68	46.34	63.95	90.16	111.25	50.26	108.24	79.73	48.72	58.03	50.53	56.12	20.33	15.93	97.87	6.61	10.42	11.75
52	ER9d	ExonRegion	1	40.45	31.82	47.02	74.45	49.46	23.92	33.20	43.14	57.24	55.73	26.04	91.92	57.36	31.96	37.88	25.31	26.55	12.83	10.15	80.90	7.02	20.08	10.04