Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	UPF3B	Gene	0	209.10	139.04	217.66	190.49	173.72	91.64	165.54	92.53	58.89	78.82	131.02	205.88	187.33	146.78	128.27	123.79	135.76	66.71	98.78	94.49	23.83	41.14	30.59
2	345865	Transcript	0	455.34	179.64	569.58	414.33	375.21	143.10	339.96	157.44	101.65	94.02	184.57	298.00	471.56	286.54	159.22	204.73	219.64	99.07	248.10	119.59	25.88	41.76	58.47
3	276201	Transcript	0	8.86	3.27	8.95	0.17	10.13	1.45	1.97	3.54	0.95	1.91	4.17	27.83	21.64	10.48	7.90	12.30	14.87	1.92	3.58	1.06	1.36	7.10	6.02
4	478840	Transcript	0	8.21	9.66	8.13	7.06	8.76	4.51	8.12	2.99	2.85	3.20	6.85	14.53	7.61	5.86	6.75	12.97	7.44	3.48	4.67	5.26	1.81	1.99	4.47
5	ER1a	ExonRegion	0	89.17	61.22	58.41	49.66	47.95	46.62	73.25	26.88	23.09	35.24	77.51	27.80	39.16	61.49	48.76	88.80	100.17	67.03	57.76	63.26	26.02	13.02	18.19
6	E1_Da	NovelBoundary	0	0.00	6.25	12.00	10.82	0.00	7.67	2.21	19.80	9.72	10.72	12.90	0.00	0.00	14.48	8.90	12.13	7.85	23.01	24.00	34.96	5.56	0.00	11.52
7	E1a_E2a	KnownJunction	0	78.16	71.11	170.81	159.92	16.38	26.52	57.28	73.03	52.72	64.82	188.15	84.63	141.55	190.01	132.27	212.08	189.06	93.81	85.84	133.27	22.55	64.85	40.55
8	I1	Intron	0	28.82	25.96	17.61	36.29	29.14	17.89	16.75	22.94	12.84	16.29	8.33	10.60	17.28	12.10	13.22	15.85	13.67	24.35	16.44	29.57	2.87	4.49	7.83
9	I1_AR1	ActiveIntronRegion	0	17.96	14.28	15.57	27.13	19.84	15.62	11.67	14.30	12.01	13.97	8.49	4.62	11.56	11.70	10.51	11.81	12.21	26.63	15.48	26.74	3.63	3.16	5.61
10	I1_AR2	ActiveIntronRegion	0	41.09	27.83	20.31	51.54	34.11	20.14	17.87	32.89	14.48	19.52	8.83	9.25	23.83	17.03	16.37	22.79	11.82	28.99	20.51	30.98	3.77	3.94	11.69
11	I1_SR1	SilentIntronRegion	0	40.42	44.56	20.01	43.13	41.56	20.87	24.80	31.74	13.64	18.79	8.03	21.01	23.53	10.34	16.05	18.80	17.65	19.02	16.29	34.27	1.19	7.13	9.57
12	E2_Aa	NovelBoundary	0	69.94	39.27	31.64	62.86	34.80	29.76	65.18	29.53	6.31	16.52	21.79	18.91	36.04	11.65	0.00	3.67	8.32	15.01	17.32	21.67	2.90	5.88	3.76
13	ER2a	ExonRegion	0	140.26	98.49	156.26	163.57	115.61	88.02	100.84	70.80	62.32	73.16	153.87	134.25	139.78	127.64	103.14	163.55	134.50	109.88	85.32	121.85	19.28	39.96	41.33
14	E2a_E3a	KnownJunction	1	55.64	107.09	174.42	146.00	115.28	118.28	220.42	85.06	61.80	65.11	132.19	171.81	171.09	127.20	82.45	47.08	112.58	16.66	25.13	93.38	21.56	36.80	7.60
15	I2	Intron	0	26.80	43.16	17.50	30.59	32.06	18.20	19.94	9.70	11.97	8.19	4.63	20.57	38.24	6.87	10.81	7.12	7.91	6.32	7.63	10.20	2.26	2.14	6.03
16	I2_SR1	SilentIntronRegion	0	23.88	38.26	17.60	29.15	32.11	11.69	17.87	10.59	9.78	8.62	3.08	32.67	37.89	6.78	14.32	7.48	9.23	5.51	10.05	11.64	1.76	3.45	8.03
17	I2_AR1	ActiveIntronRegion	0	29.71	47.97	17.85	32.41	32.79	23.66	22.01	9.25	13.94	8.06	5.94	11.74	39.44	7.10	8.35	7.02	7.08	7.10	5.91	9.33	2.71	1.18	4.63
18	E3_Aa	NovelBoundary	0	59.05	34.34	29.80	45.91	33.02	25.72	45.49	43.78	37.88	24.34	12.74	7.50	33.93	10.18	8.90	22.47	15.71	1.58	0.00	18.34	0.00	0.00	4.10
19	ER3a	ExonRegion	0	255.03	174.66	165.78	169.11	269.20	147.12	287.25	87.13	61.91	85.12	171.90	278.62	265.05	163.87	130.42	110.77	154.74	34.55	64.39	118.63	14.97	67.94	24.34
20	E3a_E4a	KnownJunction	0	349.54	203.65	194.91	189.09	210.61	80.98	145.25	119.69	69.13	74.41	161.30	260.03	218.82	151.92	118.55	123.30	149.79	40.00	77.56	114.92	14.21	42.86	36.19
21	E3a_E5a	NovelJunction	0	11.04	0.00	3.40	0.00	0.00	2.90	1.94	2.18	3.21	0.00	2.68	13.20	13.64	0.00	0.00	0.00	0.00	0.00	4.61	0.00	0.00	0.00	0.00
22	ER4a	ExonRegion	0	316.94	174.65	201.22	218.92	179.77	76.81	171.31	120.63	70.23	93.86	205.38	204.49	282.71	156.78	123.27	161.19	137.64	46.80	97.04	118.01	9.69	73.89	34.56
23	E4_Ab	KnownBoundary	0	506.46	212.46	233.26	272.76	267.49	98.52	276.59	130.20	78.53	124.29	190.63	173.46	293.65	162.81	157.98	169.53	116.60	44.27	115.67	101.50	8.28	109.85	27.83
24	ER4b	ExonRegion	0	351.30	170.38	257.44	267.20	260.65	90.61	241.10	132.44	80.26	130.73	193.05	348.29	389.69	181.06	136.00	108.48	185.38	43.29	88.91	113.45	17.35	89.96	27.85
25	E4a_E5a	KnownJunction	1	419.19	195.69	318.11	262.00	319.78	108.06	294.83	136.49	79.80	126.79	197.16	425.99	440.72	188.18	106.81	71.78	216.18	35.69	79.16	122.91	14.52	76.97	30.99
26	E4a_E6a	NovelJunction	0	19.93	0.00	1.30	5.86	0.00	0.00	1.81	2.51	1.27	2.63	7.74	12.45	6.82	9.48	0.00	4.02	4.39	1.99	0.00	0.00	0.00	0.00	7.17
27	ER5a	ExonRegion	1	330.77	155.14	303.14	302.94	326.66	136.16	254.24	138.09	82.96	120.95	149.65	361.02	420.33	166.26	156.01	134.12	166.32	45.59	102.59	106.21	14.59	66.35	23.20
28	E5_Da	NovelBoundary	0	16.82	25.65	54.64	33.00	68.34	16.41	64.21	12.45	12.76	19.39	0.00	19.66	25.97	6.95	17.80	7.86	13.56	1.91	14.40	6.46	0.00	11.63	8.37
29	E5a_E6a	KnownJunction	1	663.30	230.16	275.63	331.16	639.98	146.85	358.34	127.82	69.70	102.02	145.93	424.64	507.43	203.60	222.26	185.85	172.79	51.98	136.00	115.69	8.40	109.91	46.86
30	E5a_E7a	NovelJunction	0	10.74	0.00	33.23	4.00	4.24	2.50	8.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.30	0.00	0.00	0.00	0.00	3.20	0.00	0.00	0.00
31	ER6a	ExonRegion	1	536.34	160.88	236.05	227.51	307.95	97.69	249.75	109.91	52.04	73.66	121.90	332.68	460.80	169.17	173.42	100.24	146.66	37.88	81.01	117.12	13.57	65.02	29.70
32	E6a_E7a	KnownJunction	1	893.34	173.78	165.04	122.73	237.10	88.19	266.43	74.02	28.88	35.70	79.70	455.70	371.08	175.35	162.80	70.32	115.19	16.75	75.96	126.88	17.11	21.92	15.54
33	ER7a	ExonRegion	1	435.10	185.06	233.70	179.01	321.70	138.16	295.62	77.52	50.09	46.78	114.04	353.36	487.12	155.40	124.82	107.78	124.01	53.97	95.86	106.75	8.81	40.50	31.69
34	E7a_E8a	KnownJunction	1	6.08	2.30	5.88	3.93	8.40	2.16	1.85	0.00	0.00	1.21	5.00	67.97	28.41	11.71	0.00	25.89	9.35	4.19	0.00	3.26	5.93	13.96	0.00
35	E7a_E9a	KnownJunction	0	455.34	179.64	569.58	414.33	375.21	143.10	339.96	157.44	101.65	94.02	184.57	298.00	471.56	286.54	159.22	204.73	219.64	99.07	248.10	119.59	25.88	41.76	58.47
36	E8_Aa	NovelBoundary	0	6.89	9.08	8.43	0.00	0.00	2.90	2.03	0.00	0.00	0.00	2.68	15.00	13.15	4.77	4.45	4.36	16.92	0.00	0.00	21.86	2.66	3.06	12.04
37	ER8a	ExonRegion	1	9.82	21.95	12.54	2.48	16.88	4.42	3.77	3.72	1.11	4.79	12.64	81.37	19.72	19.86	11.83	24.23	23.44	3.51	0.00	3.49	7.29	17.15	7.45
38	E8_Da	KnownBoundary	0	2.89	39.86	9.79	1.70	3.31	5.79	3.97	0.00	1.79	4.75	6.42	19.21	0.00	7.30	4.45	7.60	13.74	0.00	0.00	6.33	5.68	5.76	0.00
39	E8a_E9a	KnownJunction	1	13.48	5.53	10.85	0.00	18.93	2.90	3.93	6.65	1.27	3.81	6.90	55.67	39.77	17.31	9.27	17.17	20.66	1.99	0.00	0.00	2.72	14.21	12.04
40	ER8b	ExonRegion	0	2.36	17.13	3.06	0.16	0.41	1.52	4.28	0.00	0.97	2.82	3.72	6.16	3.97	4.34	5.75	4.23	5.14	0.07	0.12	4.21	1.27	2.80	0.56
41	E8b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.30	0.00	0.00	0.00	3.33	0.00	0.00	0.00	3.07	0.00	0.00	3.33
42	E9_Aa	NovelBoundary	0	25.86	24.14	7.45	3.60	7.13	0.00	23.14	3.53	0.00	2.79	9.37	12.30	7.30	9.06	26.08	34.35	0.00	13.18	4.80	20.96	11.18	6.25	4.35
43	ER9a	ExonRegion	0	359.11	146.76	398.67	330.97	263.10	116.00	224.05	122.81	96.87	104.14	187.31	416.41	437.08	246.17	157.84	199.52	220.50	97.52	139.38	112.36	34.03	54.06	61.54
44	E9_Da	KnownBoundary	0	19.56	36.57	36.43	20.48	20.97	0.00	37.10	27.44	6.22	15.02	20.27	24.16	31.00	11.95	28.93	30.68	20.76	15.88	9.32	17.96	2.47	0.00	7.85
45	E9a_E10a	KnownJunction	1	1377.87	251.34	372.40	328.93	333.19	223.11	296.60	112.01	86.95	124.69	163.78	391.48	482.44	285.30	187.65	309.41	257.32	113.87	202.17	75.81	45.41	37.17	47.21
46	ER9b	ExonRegion	0	22.25	11.86	21.34	21.02	25.86	12.02	20.07	8.97	7.58	6.77	16.82	31.12	18.85	13.25	14.51	31.34	17.19	10.37	13.88	8.49	4.15	3.16	9.51
47	E9_Db	NovelBoundary	0	53.34	32.95	42.28	24.77	22.67	4.60	26.37	9.53	5.30	11.77	7.16	18.01	27.92	23.72	13.10	8.03	13.46	8.95	57.51	14.32	2.53	0.00	15.45
48	E10_Aa	NovelBoundary	0	84.31	20.06	58.22	36.73	41.77	29.76	27.60	10.93	6.57	7.92	19.74	23.41	33.28	8.95	33.87	35.89	12.25	22.92	22.68	25.95	0.00	5.76	4.35
49	ER10a	ExonRegion	0	297.12	193.74	303.85	252.27	255.76	131.73	221.92	118.94	64.34	89.97	179.75	288.31	216.36	248.14	167.92	202.77	195.48	119.83	172.73	112.53	41.06	42.60	47.25
50	E10a_E11a	KnownJunction	0	332.28	244.96	317.32	305.42	273.34	113.74	207.92	152.26	85.91	80.77	179.78	309.10	140.41	176.94	208.42	173.12	144.55	173.23	277.47	143.94	40.65	40.11	38.84
51	ER11a	ExonRegion	0	145.01	149.60	236.25	204.20	135.29	84.00	142.51	108.15	66.80	93.50	130.90	163.90	94.63	139.72	150.43	115.33	129.73	64.82	104.25	98.51	27.14	41.30	28.38
52	ER11b	ExonRegion	0	4.23	1.02	7.05	0.34	1.34	0.00	0.00	0.43	0.62	0.00	1.45	0.00	3.52	3.65	6.53	7.43	9.08	1.85	7.17	2.13	0.00	0.00	0.00
53	IG29	Intergenic	0	10.28	7.17	17.98	21.34	12.48	4.23	10.42	13.07	6.76	5.75	3.13	6.48	8.33	4.89	6.68	7.31	5.03	9.79	8.52	14.71	1.44	2.17	3.30
54	IG29_SR13	SilentIntergenicRegion	0	8.23	6.10	7.60	8.51	12.98	5.17	9.77	6.06	2.42	3.69	0.67	18.16	13.22	12.77	11.28	5.62	6.88	4.68	6.00	6.81	1.96	2.24	5.79
55	IG29_AR11	ActiveIntergenicRegion	0	11.24	11.30	18.20	27.86	18.91	8.71	16.54	15.86	10.26	7.07	7.06	19.30	10.13	17.34	14.05	21.39	13.28	13.77	12.48	25.87	4.35	4.88	9.47
56	IG29_SR12	SilentIntergenicRegion	0	12.89	7.27	23.59	34.45	31.04	5.15	15.39	28.98	11.83	9.64	4.53	15.73	20.07	11.98	15.89	10.82	6.65	12.23	13.14	21.69	0.85	6.38	5.93
57	IG29_AR10	ActiveIntergenicRegion	0	49.52	14.99	47.79	68.25	57.55	10.07	41.15	39.35	17.10	15.14	20.87	41.53	35.00	31.88	35.67	23.06	13.94	33.60	32.21	47.52	4.06	11.56	13.89
58	IG29_SR11	SilentIntergenicRegion	0	13.57	10.40	24.23	27.45	16.99	5.31	16.65	20.42	8.54	8.79	5.71	7.52	10.82	6.63	9.50	10.90	9.52	14.82	13.28	24.48	1.80	2.45	4.94
59	IG29_AR9	ActiveIntergenicRegion	0	7.35	18.28	39.46	30.88	22.72	11.09	14.80	19.01	4.84	9.34	2.77	5.35	14.81	9.60	8.96	5.27	4.98	21.96	9.52	25.76	0.00	2.39	5.41
60	IG29_SR10	SilentIntergenicRegion	0	10.21	8.92	29.74	28.52	14.01	4.01	14.11	18.53	7.29	6.05	2.41	6.79	10.11	3.66	5.93	7.51	3.47	8.35	5.26	10.34	0.60	0.95	2.95
61	IG29_SR9	SilentIntergenicRegion	0	6.96	5.87	12.59	27.85	9.66	5.44	8.17	11.98	8.12	5.49	1.08	2.47	3.67	2.02	5.94	5.48	3.71	16.35	11.49	16.55	1.76	2.00	4.00
62	IG29_AR7	ActiveIntergenicRegion	0	8.06	6.85	22.84	24.48	12.73	5.50	11.03	15.04	9.67	2.50	1.34	2.20	4.77	2.52	3.48	5.86	0.97	10.48	10.27	19.34	0.96	2.36	0.86
63	IG29_SR7	SilentIntergenicRegion	0	12.21	7.63	17.63	20.49	11.09	3.18	8.45	11.20	7.10	5.29	2.07	4.03	7.56	1.86	3.61	5.14	2.85	10.08	8.42	15.96	1.49	2.47	1.85
64	IG29_AR5	ActiveIntergenicRegion	0	6.61	6.65	27.31	42.85	15.00	7.71	13.07	13.10	5.47	2.73	3.90	5.38	3.81	3.93	4.96	5.64	0.00	10.08	6.91	11.67	0.06	1.29	4.20
65	IG29_SR6	SilentIntergenicRegion	0	11.81	5.68	13.38	22.75	11.26	3.21	6.56	8.93	7.07	3.99	0.94	3.05	7.01	2.33	2.48	3.40	3.10	6.09	2.51	6.01	1.23	2.13	1.43
66	IG29_AR4	ActiveIntergenicRegion	0	14.93	3.53	24.37	16.32	9.74	5.69	9.53	14.24	9.49	11.57	3.00	5.99	12.57	3.00	9.49	6.02	4.83	4.24	6.52	11.01	2.05	0.00	3.48
67	IG29_SR4	SilentIntergenicRegion	0	2.01	5.78	6.38	1.51	0.00	0.00	1.18	0.00	1.24	3.44	1.73	3.42	0.00	10.26	8.70	0.00	5.56	3.70	0.00	0.00	0.00	2.08	0.00
68	IG29_SR2	SilentIntergenicRegion	0	0.00	1.31	8.84	0.00	3.63	1.18	0.00	0.00	1.50	2.46	6.35	0.00	0.34	7.31	14.09	5.94	2.83	5.54	0.00	2.13	0.00	2.08	3.15
69	IG29_AR2	ActiveIntergenicRegion	0	0.00	0.00	9.39	1.59	0.45	0.00	0.00	0.00	0.21	3.44	6.12	0.00	0.00	8.12	14.99	4.95	3.85	3.70	0.00	2.13	0.00	2.08	2.94