Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CXorf39 Gene 0 37.93 74.90 49.16 82.80 74.37 75.29 67.16 64.18 86.32 75.04 81.18 131.11 81.04 75.00 35.33 44.21 46.60 28.22 24.33 53.67 22.46 59.43 30.89 2 417246 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 493442 Transcript 0 31.06 48.01 40.29 57.86 42.39 62.18 49.89 43.00 77.59 55.67 103.85 90.44 58.46 109.70 30.33 71.44 64.88 66.98 22.18 66.20 64.76 55.04 46.95 4 299906 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 IG43_AR4 ActiveIntergenicRegion 0 2.60 1.25 0.00 0.00 1.64 3.38 5.69 0.00 4.51 4.20 16.60 2.19 2.37 15.65 5.56 12.78 18.25 9.62 5.87 5.23 5.42 3.82 10.83 6 ER1a ExonRegion 1 3.27 4.37 7.80 4.51 3.01 8.19 5.96 5.85 20.34 15.00 57.06 7.61 15.74 60.24 19.20 28.56 42.26 41.60 14.77 29.42 28.99 19.80 21.79 7 E1a_E2a KnownJunction 1 12.30 9.80 14.87 15.42 3.99 17.94 12.67 12.08 47.22 34.03 102.82 11.10 6.66 102.30 33.38 23.33 79.29 50.16 12.99 63.09 53.75 17.94 12.04 8 I1 Intron 0 4.79 6.02 5.21 4.10 3.62 0.93 5.36 3.09 2.04 2.25 3.62 11.97 17.88 4.28 2.60 2.19 3.15 1.92 2.60 6.32 1.90 1.21 1.28 9 I1_SR1 SilentIntronRegion 0 5.41 6.52 5.67 4.40 4.01 0.97 5.63 3.36 1.92 2.43 4.01 11.11 17.19 4.29 2.58 2.52 3.59 2.23 2.96 6.77 2.12 1.05 1.18 10 I1_SR2 SilentIntronRegion 0 2.55 4.04 3.18 3.42 1.93 0.77 4.45 2.32 2.55 1.95 2.43 16.82 22.82 4.76 3.06 1.07 1.19 0.50 1.34 5.37 1.19 2.51 1.77 11 ER2a ExonRegion 0 8.83 21.22 21.06 20.24 14.07 30.66 29.83 20.01 63.18 48.14 161.96 119.49 109.45 157.01 44.31 66.71 109.72 58.99 35.31 65.93 74.16 49.31 47.04 12 E2_Da NovelBoundary 0 2.89 9.27 4.49 6.36 0.00 0.00 4.42 6.78 3.33 5.59 2.63 13.95 13.64 0.00 4.45 6.84 15.99 1.62 0.00 11.76 0.00 0.00 12.72 13 E2a_E3a KnownJunction 0 0.00 15.39 20.11 31.96 15.03 33.39 14.62 25.30 61.75 53.16 114.92 99.78 52.92 128.85 48.33 61.52 86.40 70.30 14.21 62.32 52.88 55.60 59.84 14 I2_AR2 ActiveIntronRegion 0 11.54 11.97 12.68 13.92 9.23 0.00 17.68 24.07 22.71 14.78 2.92 10.17 19.44 1.74 5.17 5.32 4.17 5.85 4.76 18.02 0.92 2.15 1.11 15 I2_AR4 ActiveIntronRegion 0 7.66 8.17 6.02 9.48 7.61 1.73 6.55 11.11 15.01 16.80 3.35 10.60 11.90 2.78 5.70 7.95 5.44 7.52 7.60 9.23 2.78 3.79 4.59 16 I2_SR6 SilentIntronRegion 1 10.02 7.83 1.71 1.08 19.89 4.22 11.07 0.00 0.00 5.63 0.00 2.53 5.49 2.27 11.50 22.66 10.09 5.40 7.15 9.67 4.20 3.85 5.54 17 ER3a ExonRegion 0 2.32 25.55 23.24 40.19 18.88 14.01 39.22 43.54 75.44 64.03 116.12 135.93 86.46 119.85 38.76 93.03 89.87 51.70 36.12 62.59 52.56 78.07 42.89 18 E3_Ab KnownBoundary 1 3.04 42.36 41.01 50.08 15.45 16.01 72.25 59.72 98.32 90.52 137.82 167.75 140.25 145.51 32.39 146.54 119.96 70.60 71.72 84.18 79.14 112.00 46.27 19 ER3b ExonRegion 0 9.82 34.95 32.38 34.93 22.34 47.92 47.10 46.58 83.24 70.46 194.09 212.55 184.65 190.81 53.00 108.28 129.99 57.66 62.89 101.67 78.61 65.51 42.96 20 E3a_E4a KnownJunction 0 6.74 35.45 34.00 45.08 15.45 40.66 43.10 60.75 79.28 76.93 159.20 139.85 205.67 143.62 78.87 80.66 97.15 56.83 41.51 63.60 36.70 62.76 34.06 21 ER4a ExonRegion 0 16.53 31.70 29.52 44.53 31.20 53.36 48.58 50.19 76.17 66.58 191.15 177.11 164.50 157.16 53.15 108.81 98.09 89.46 41.23 75.58 50.24 66.43 50.30 22 E4a_E5a KnownJunction 0 24.97 31.57 30.42 36.46 27.50 47.59 67.26 45.51 69.73 59.79 186.84 136.09 143.98 163.17 61.19 79.30 92.66 64.17 55.15 53.82 63.26 50.21 61.80 23 ER5a ExonRegion 0 10.32 38.20 25.25 30.89 23.31 42.00 33.73 30.89 66.71 49.85 148.47 141.77 138.05 141.25 49.11 92.39 91.11 83.20 19.53 59.37 75.45 39.89 51.58 24 E5_Da KnownBoundary 0 21.71 45.19 17.50 28.50 12.56 44.46 26.63 28.67 44.33 28.21 94.13 87.03 115.09 78.87 63.79 80.32 79.29 91.90 11.86 76.51 93.28 36.25 46.52 25 E5a_E6a KnownJunction 0 0.00 3.35 0.00 4.69 0.00 5.17 3.80 2.09 10.30 3.25 10.16 6.30 0.00 22.43 0.00 7.26 9.07 4.06 0.00 6.14 0.00 2.76 0.00 26 ER5b ExonRegion 0 19.18 22.84 27.76 26.32 18.50 35.65 28.93 31.30 59.11 40.03 119.45 84.21 57.92 144.29 40.53 94.49 81.32 89.79 30.27 76.53 87.16 40.57 59.10 27 E5b_E6a KnownJunction 1 23.34 17.96 29.89 31.00 7.30 53.15 36.13 13.14 73.96 35.48 133.51 56.12 51.46 135.38 22.25 88.69 80.79 94.51 12.05 71.33 96.19 59.27 56.68 28 ER6a ExonRegion 0 25.20 40.31 33.29 39.64 46.14 49.84 50.08 39.18 74.38 55.87 106.68 151.17 111.39 105.61 50.71 58.67 58.04 33.90 21.28 57.30 28.11 55.61 38.63 29 E6_Da KnownBoundary 0 9.63 14.21 7.48 22.74 9.51 21.46 18.68 20.95 59.23 42.93 13.11 42.16 6.82 19.78 0.00 7.43 15.52 6.67 12.05 18.60 0.00 21.74 3.41 30 E6_Db KnownBoundary 0 12.52 23.75 4.79 26.47 19.27 21.46 33.78 24.52 47.54 34.28 42.96 18.76 14.93 17.07 0.00 31.96 28.05 13.27 8.47 17.13 28.91 35.70 11.35 31 ER6b ExonRegion 1 19.05 36.60 12.25 47.02 24.08 88.02 58.25 44.08 96.34 79.14 71.52 158.03 79.73 69.03 11.61 52.01 79.22 25.87 27.08 51.06 28.65 101.05 41.11 32 ER6c ExonRegion 0 50.65 103.24 63.21 116.26 101.38 97.74 84.62 84.54 99.71 91.50 58.59 130.99 66.00 49.43 28.22 31.14 32.52 16.64 24.21 50.75 10.94 65.26 25.07