Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NKAP Gene 0 43.57 47.06 66.07 45.94 47.05 23.39 31.43 36.59 32.50 34.02 37.86 47.68 40.95 44.38 50.19 41.00 42.43 25.97 31.33 24.82 20.84 33.53 28.59 2 371410 Transcript 1 54.35 31.42 85.65 49.30 67.54 34.76 41.06 36.50 44.92 44.70 93.12 27.60 40.34 110.17 78.66 63.56 95.26 35.51 43.44 38.08 52.06 44.32 49.45 3 477789 Transcript 0 8.71 7.28 12.65 16.54 8.23 5.77 10.47 14.47 13.37 12.73 3.12 3.70 3.44 2.22 4.50 12.06 7.94 17.86 9.37 10.59 4.09 2.83 7.91 4 482407 Transcript 0 9.63 8.52 9.31 11.51 13.31 7.01 7.66 7.81 7.54 3.82 3.09 6.57 10.26 6.58 8.15 8.47 2.73 2.82 2.56 6.24 1.94 8.71 9.19 5 ER1a ExonRegion 0 23.96 14.69 37.17 13.04 24.29 32.25 19.84 17.61 20.19 20.90 46.54 8.09 11.56 76.42 58.93 69.13 60.04 26.52 41.96 20.98 36.32 27.21 44.90 6 E1a_E2a KnownJunction 0 37.04 27.69 85.54 39.39 82.17 32.14 45.89 39.76 42.39 29.90 74.39 18.01 40.09 119.08 70.71 55.80 101.36 25.99 24.47 31.77 60.17 46.17 39.61 7 ER2a ExonRegion 1 61.27 38.44 104.20 60.69 76.77 36.31 39.31 42.64 49.44 57.13 105.28 29.24 34.22 119.46 75.00 72.98 94.06 37.66 50.85 37.33 57.68 59.37 42.78 8 E2a_E3b KnownJunction 1 95.13 44.86 115.70 84.07 86.93 38.33 59.22 46.00 67.68 70.89 146.25 55.07 75.48 125.73 110.02 56.31 125.57 51.86 56.47 62.26 54.06 44.52 70.51 9 ER3a ExonRegion 0 17.43 14.55 25.30 32.41 16.47 11.55 20.93 28.94 26.74 23.74 6.23 7.40 6.87 4.43 9.00 18.92 15.88 33.87 18.74 21.19 8.18 5.67 15.82 10 E3_Ab KnownBoundary 0 0.00 5.92 11.56 10.09 0.00 0.00 5.83 7.76 5.84 2.61 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 4.52 0.00 0.00 0.00 0.00 11 ER3b ExonRegion 0 92.67 44.54 118.34 74.88 75.46 45.64 38.30 68.62 60.91 67.08 125.03 78.55 97.22 106.36 105.07 60.38 105.11 30.86 64.03 38.75 61.07 58.19 49.29 12 E3a_E4a KnownJunction 0 75.27 76.43 141.48 69.12 85.40 78.65 45.49 76.11 43.34 74.11 111.40 74.27 131.00 112.90 107.42 63.32 97.99 22.80 42.64 35.79 49.11 61.11 47.12 13 ER4a ExonRegion 0 80.88 102.58 125.83 102.93 116.56 56.55 59.96 72.11 62.89 67.61 97.99 128.50 168.04 110.96 110.40 67.81 102.25 13.30 45.04 44.44 26.12 79.41 46.79 14 E4a_E5a KnownJunction 0 143.36 146.55 165.49 107.68 166.98 55.54 79.54 95.70 81.60 73.63 104.45 199.87 195.93 93.35 164.41 68.61 106.97 10.45 76.99 41.48 16.37 74.40 46.27 15 ER5a ExonRegion 1 123.78 131.07 167.32 100.28 138.89 73.61 90.13 69.87 62.97 72.92 92.66 211.47 166.35 111.00 111.34 66.08 105.53 10.88 76.90 47.94 15.22 85.33 55.80 16 E5_Da NovelBoundary 0 3.78 13.29 3.28 14.78 0.00 11.19 7.91 5.09 0.00 0.00 0.00 0.00 12.82 14.48 19.28 16.24 9.26 4.15 13.46 0.00 0.00 0.00 0.00 17 E5a_E6b KnownJunction 1 150.69 190.69 199.90 132.15 172.92 85.92 101.40 74.06 60.16 92.54 85.07 251.78 141.22 150.92 106.31 104.50 98.08 14.67 62.78 39.82 22.24 124.30 61.03 18 E6_Aa NovelBoundary 0 3.70 15.59 4.79 7.16 7.13 0.00 16.69 6.08 4.54 12.30 4.74 0.00 0.00 4.36 5.19 7.52 0.00 10.65 0.00 3.26 2.97 3.12 0.00 19 ER6a ExonRegion 0 9.63 8.52 9.31 11.51 13.31 7.01 7.66 7.81 7.54 3.82 3.09 6.57 10.26 6.58 8.15 8.47 2.73 2.82 2.56 6.24 1.94 8.71 9.19 20 E6_Ab KnownBoundary 0 24.37 11.18 20.93 22.34 28.10 5.00 13.20 17.25 7.75 5.78 0.00 0.00 6.33 7.89 5.81 4.36 0.00 0.00 0.00 6.01 0.00 11.51 4.35 21 ER6b ExonRegion 1 177.11 195.17 221.16 152.73 154.95 53.43 87.79 96.87 91.39 99.85 120.92 307.75 271.25 128.26 152.25 115.75 137.24 25.43 64.73 51.12 33.76 139.75 61.29 22 E6a_E7a KnownJunction 1 166.10 306.20 264.33 133.78 168.17 56.16 110.27 85.52 60.97 73.01 105.71 256.73 239.76 76.87 93.33 88.35 111.27 23.05 40.19 56.25 53.00 92.52 65.90 23 ER7a ExonRegion 1 109.08 224.31 177.29 120.54 196.49 59.45 111.44 81.49 62.71 80.65 119.87 272.02 158.72 111.47 124.98 77.04 120.18 25.07 82.82 52.38 57.21 104.07 56.11 24 E7a_E8a KnownJunction 1 157.14 229.37 186.45 157.32 318.00 51.50 180.98 89.66 77.81 84.83 101.87 249.98 108.60 131.85 176.40 99.46 105.84 47.80 97.41 59.76 46.77 92.46 72.30 25 ER8a ExonRegion 1 145.94 217.25 224.69 156.20 220.26 61.68 106.76 101.73 91.88 90.66 105.93 272.44 138.87 135.95 205.49 132.51 98.62 52.28 87.25 69.07 62.73 106.06 63.25 26 E8_Da KnownBoundary 0 273.09 304.09 284.44 173.54 250.76 110.33 87.71 119.57 137.06 108.68 110.29 236.48 224.66 133.44 245.50 172.86 121.46 69.02 106.36 76.76 71.60 130.86 66.58 27 ER8b ExonRegion 0 127.44 156.85 235.77 122.31 101.63 43.39 67.36 85.46 70.39 80.43 127.91 198.48 119.14 145.23 192.04 96.28 98.91 49.58 80.69 57.54 72.64 102.36 70.96 28 E8_Db NovelBoundary 0 3.41 3.35 24.39 38.19 27.08 9.48 15.85 18.32 12.88 8.95 4.63 26.26 13.80 11.07 4.45 12.05 0.00 9.16 4.80 0.00 0.00 14.39 7.85 29 E8b_E9a KnownJunction 0 107.95 161.62 229.68 108.04 74.79 76.89 83.60 77.96 87.30 73.74 62.07 99.63 60.06 113.25 215.22 66.05 82.37 47.01 102.78 48.39 36.88 74.22 53.86 30 I8 Intron 0 13.26 7.34 10.15 17.78 15.21 3.88 7.09 9.41 6.34 4.11 2.81 10.89 9.38 4.42 6.43 3.58 1.92 1.22 3.17 2.74 0.91 4.84 3.29 31 I8_SR1 SilentIntronRegion 0 12.21 7.25 9.80 17.72 15.55 3.99 7.22 9.46 6.05 3.98 2.85 11.13 9.97 4.60 6.39 3.40 2.10 1.17 3.06 2.82 0.71 5.05 3.04 32 I8_AR1 ActiveIntronRegion 0 25.03 8.53 14.17 18.82 11.77 2.72 5.80 9.05 9.59 5.65 2.36 8.41 3.10 2.48 7.04 5.63 0.00 1.78 4.52 1.84 3.12 2.67 6.13 33 E9_Aa NovelBoundary 0 12.82 9.54 18.12 32.73 20.88 2.90 6.27 13.47 9.87 3.06 7.26 12.60 14.61 4.53 6.06 4.19 0.00 2.49 4.80 0.00 2.90 2.57 3.24 34 ER9a ExonRegion 0 95.97 116.54 160.19 78.90 99.28 24.72 49.08 63.44 43.36 59.42 58.69 69.13 56.56 61.60 105.88 49.97 52.54 23.20 41.42 27.24 25.76 77.96 31.10 35 ER9b ExonRegion 0 0.00 0.00 0.00 0.68 0.00 0.00 0.00 0.00 0.00 1.72 0.00 0.00 0.00 0.00 0.00 5.20 0.00 1.85 0.00 0.00 0.00 0.00 0.00 36 IG33 Intergenic 0 8.19 18.37 21.65 27.81 32.66 13.74 20.36 15.21 19.18 15.01 2.21 10.02 8.35 6.45 3.72 7.37 4.09 7.44 16.59 10.77 3.28 9.72 5.54 37 IG33_SR1 SilentIntergenicRegion 0 7.41 18.62 22.42 29.59 32.76 14.57 20.43 15.96 20.47 15.99 2.18 9.99 8.86 6.85 3.80 7.37 4.25 7.54 17.96 11.45 3.55 10.41 5.69 38 IG33_AR1 ActiveIntergenicRegion 0 18.16 15.57 12.58 6.35 32.14 3.69 19.98 6.19 3.43 3.15 2.57 10.60 2.22 1.58 2.75 7.55 2.22 6.32 0.00 2.52 0.00 1.29 3.79