Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DCX Gene 0 26.83 767.23 127.25 130.83 343.37 279.18 198.74 535.00 292.08 262.71 0.22 1.13 1.46 0.85 1.37 0.69 0.50 502.81 573.63 519.35 0.75 0.61 0.61 2 488120 Transcript 0 0.37 2.66 0.11 0.71 3.27 6.34 4.68 3.72 4.75 3.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.80 14.17 12.71 0.00 0.00 0.00 3 496551 Transcript 0 0.70 5.47 0.62 0.54 3.63 4.32 5.72 5.56 2.16 0.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.34 6.44 8.09 0.00 0.00 0.00 4 356220 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 371988 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 356915 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 371993 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 468911 Transcript 0 0.00 2.41 0.00 0.00 0.43 0.60 0.00 1.26 0.30 0.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 5.79 1.04 0.00 0.00 0.00 9 338081 Transcript 0 0.00 0.82 0.94 0.52 0.00 0.00 1.36 0.66 0.95 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 1.10 0.00 0.00 0.00 10 358070 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ER1a ExonRegion 0 0.37 2.66 0.11 0.71 3.27 6.34 4.68 3.72 4.75 3.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.80 14.17 12.71 0.00 0.00 0.00 12 E1_Ab KnownBoundary 0 3.70 15.92 0.00 2.06 4.24 2.90 6.05 2.38 5.38 3.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.90 16.57 33.36 0.00 0.00 0.00 13 E1_Ac KnownBoundary 0 0.00 44.99 2.81 8.22 62.82 87.39 50.96 45.84 49.57 38.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 152.92 175.25 170.40 0.00 0.00 0.00 14 ER1b ExonRegion 0 2.12 44.51 2.45 9.24 45.49 81.71 51.05 49.55 54.62 35.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 181.08 204.22 194.80 0.00 0.00 0.00 15 ER1c ExonRegion 0 4.50 147.33 5.79 17.65 80.07 193.83 105.09 98.05 103.01 63.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 561.95 510.85 496.59 0.00 0.00 0.00 16 E1_Da KnownBoundary 0 0.00 18.62 0.00 0.00 3.48 5.39 10.42 9.45 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 12.52 0.00 0.00 0.00 0.00 17 E1a_E4a KnownJunction 0 14.00 312.64 12.98 30.03 150.51 389.38 197.41 154.60 158.07 97.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1040.27 953.53 1024.78 0.00 0.00 0.00 18 ER1d ExonRegion 0 0.00 7.56 0.00 0.68 2.85 8.01 4.50 5.91 1.59 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.88 11.63 7.45 0.00 0.00 0.00 19 E1_Ad KnownBoundary 0 0.00 6.31 0.00 2.00 4.33 2.61 5.56 5.46 4.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.56 25.69 15.79 0.00 0.00 0.00 20 ER1e ExonRegion 0 0.00 2.23 0.00 0.77 0.92 3.06 3.48 5.21 5.23 5.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.53 16.52 9.98 0.00 0.00 0.00 21 E1b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.28 2.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.47 4.80 11.06 0.00 0.00 0.00 22 ER1f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 5.10 1.09 2.93 2.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.46 9.32 14.11 0.00 0.00 0.00 23 ER2a ExonRegion 0 0.00 1.98 0.00 0.00 0.87 1.19 0.00 2.51 0.60 0.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.84 2.17 2.07 0.00 0.00 0.00 24 E2a_E4a KnownJunction 0 0.00 2.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 9.41 0.00 0.00 0.00 0.00 25 ER3a ExonRegion 0 0.00 0.82 0.94 0.52 0.00 0.00 1.36 0.66 0.95 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 1.10 0.00 0.00 0.00 26 E3_Ab KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3b ExonRegion 0 0.00 0.76 0.00 0.00 1.40 0.00 2.75 2.03 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.41 2.07 0.00 0.00 0.00 28 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 2.88 0.00 0.00 0.00 29 ER4a ExonRegion 0 1.12 75.07 15.11 19.86 47.96 108.36 61.67 141.37 160.14 125.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 734.98 413.51 654.64 0.93 0.00 0.00 30 E4_Da NovelBoundary 0 2.82 182.07 13.39 17.15 46.86 116.75 86.69 164.99 226.88 204.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 722.08 526.04 801.84 0.00 0.00 0.00 31 E4b_E5a KnownJunction 0 6.96 220.42 26.73 26.97 103.31 83.59 54.81 167.54 246.55 162.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 816.30 621.29 851.76 0.00 0.00 0.00 32 ER4b ExonRegion 0 2.12 178.47 21.52 22.35 62.72 98.95 57.62 175.33 239.81 179.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 810.87 565.34 814.04 0.00 0.00 0.00 33 ER5a ExonRegion 0 3.89 167.25 30.44 28.88 64.92 121.89 65.17 198.73 225.31 172.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 962.85 530.18 689.37 0.00 0.89 0.00 34 E5a_E6a KnownJunction 0 0.00 182.93 32.02 34.73 94.99 146.22 90.58 230.30 229.45 180.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1003.50 580.53 670.94 0.00 2.39 0.00 35 ER6a ExonRegion 0 0.08 136.80 29.44 34.71 61.91 153.99 86.47 238.11 260.38 191.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1057.33 646.47 639.39 1.09 0.71 0.00 36 E6a_E7a KnownJunction 0 0.00 135.37 35.21 27.44 94.31 149.46 109.08 242.05 292.44 227.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 796.03 435.02 706.16 0.00 3.12 0.00 37 ER7a ExonRegion 0 3.44 140.78 23.74 25.17 62.85 110.04 73.47 198.00 260.31 173.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 821.30 480.65 624.47 0.91 2.13 0.00 38 E7_Da KnownBoundary 0 2.96 50.19 6.68 2.76 14.35 19.65 23.23 95.21 127.23 49.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 199.14 141.27 195.91 0.00 0.00 0.00 39 E7a_E8a KnownJunction 0 7.56 120.18 17.00 21.81 74.19 94.60 48.67 110.86 121.30 130.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 397.58 347.30 275.74 0.00 0.00 0.00 40 E7a_E9a NovelJunction 0 0.00 3.22 0.00 1.30 4.33 9.77 6.32 3.12 14.87 7.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 114.12 113.60 72.42 0.00 0.00 0.00 41 E7_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 42 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E7_Dc KnownBoundary 0 0.00 2.83 0.00 2.06 0.00 0.00 2.25 4.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.07 0.00 0.00 0.00 44 E7c_E8a KnownJunction 0 3.78 88.87 4.32 3.66 52.46 49.57 61.34 137.84 204.63 74.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 246.03 234.83 421.60 0.00 0.00 0.00 45 E7c_E9a NovelJunction 0 0.00 21.64 0.00 0.00 10.87 8.52 7.68 8.38 34.35 10.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 101.06 50.73 63.41 0.00 0.00 0.00 46 ER7b ExonRegion 0 4.23 88.12 7.35 5.68 43.70 47.37 50.75 124.74 176.00 66.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 329.82 243.15 400.00 0.00 0.00 0.00 47 ER7c ExonRegion 0 2.82 89.03 6.13 4.09 38.65 43.60 45.16 130.02 188.29 67.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 276.75 212.00 390.78 0.00 0.00 0.00 48 ER7d ExonRegion 0 1.39 3.38 1.24 0.40 4.40 0.64 6.94 5.21 2.74 0.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.79 1.25 8.73 0.00 0.00 0.00 49 ER8a ExonRegion 0 2.41 100.84 9.47 17.72 56.98 98.99 49.15 138.57 180.57 124.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 410.43 284.40 428.31 0.00 0.00 0.00 50 E8a_E9a KnownJunction 0 3.78 65.45 8.43 13.75 16.38 30.83 37.67 69.25 110.47 64.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 261.41 189.56 232.40 0.00 0.00 0.00 51 ER9a ExonRegion 0 1.97 169.95 21.74 33.52 124.23 136.83 123.83 197.79 201.96 150.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 410.21 385.72 487.66 0.49 0.28 0.00 52 E9_Da KnownBoundary 0 12.15 217.79 15.49 22.87 110.70 94.21 116.81 136.57 133.16 90.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62.93 152.57 361.07 0.00 0.00 0.00 53 ER9b ExonRegion 0 3.32 245.37 19.42 28.08 168.16 177.28 142.60 210.11 200.47 152.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 268.34 303.40 426.17 0.03 1.06 0.00 54 E9_Db KnownBoundary 0 0.00 205.16 38.56 40.12 108.49 115.50 91.90 288.34 240.94 191.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 943.64 781.20 534.92 2.41 0.00 0.00 55 ER9c ExonRegion 0 43.18 1187.73 200.50 202.72 515.21 394.68 277.03 793.11 386.08 362.19 0.37 1.87 2.42 1.41 2.27 1.14 0.82 578.91 756.85 604.61 1.06 0.73 1.00 56 ER9d ExonRegion 0 2.12 24.40 9.80 6.81 18.73 9.17 3.97 12.10 1.24 8.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.24 3.19 10.64 0.00 0.00 0.00