Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CXorf56 Gene 0 42.29 54.50 88.64 85.95 80.48 70.56 60.81 77.04 63.88 50.79 62.95 50.13 66.78 99.96 124.23 93.61 90.75 49.22 63.58 64.19 48.02 53.03 69.80 2 371594 Transcript 1 41.16 31.63 34.52 14.24 59.42 119.64 49.72 17.64 15.08 15.19 51.72 0.00 4.20 62.84 41.22 93.16 51.45 31.22 94.35 41.31 29.41 15.73 80.00 3 476164 Transcript 0 3.33 0.00 2.90 1.63 0.00 0.00 0.00 2.51 0.00 7.95 2.58 7.20 6.98 5.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 320339 Transcript 0 14.15 19.51 31.33 38.96 28.93 25.46 19.63 28.46 24.24 17.46 17.96 15.17 16.40 24.23 37.87 30.25 27.02 16.90 20.11 22.79 11.92 18.17 24.84 5 486230 Transcript 1 8.89 23.22 48.43 60.83 6.96 8.57 14.84 35.08 25.49 40.02 7.00 64.97 98.69 4.41 0.00 6.49 14.77 37.93 0.00 11.82 3.15 0.00 6.32 6 469448 Transcript 0 14.29 37.57 12.15 32.35 40.91 26.61 19.40 33.06 24.87 12.64 3.80 2.81 8.63 13.46 11.37 12.76 5.52 11.14 19.92 15.25 9.61 4.65 11.70 7 ER1a ExonRegion 1 41.16 31.63 34.52 14.24 59.42 119.64 49.72 17.64 15.08 15.19 51.72 0.00 4.20 62.84 41.22 93.16 51.45 31.22 94.35 41.31 29.41 15.73 80.00 8 ER1b ExonRegion 1 61.35 44.28 66.33 47.97 57.35 104.32 58.96 47.27 49.90 46.09 84.36 10.93 12.01 121.19 81.79 144.77 117.97 67.97 98.11 48.75 76.91 31.62 96.74 9 E1_Da KnownBoundary 0 3.63 0.00 7.75 1.96 0.00 8.23 0.00 4.35 1.42 8.57 0.00 0.00 0.00 0.00 0.00 0.00 7.29 4.23 0.00 3.26 3.15 3.12 0.00 10 E1a_E2a KnownJunction 1 37.93 12.30 69.51 41.89 19.61 30.83 12.63 49.74 49.91 43.89 161.88 11.55 20.29 58.45 20.64 20.76 217.67 25.16 18.82 86.29 130.04 25.29 7.85 11 ER1c ExonRegion 0 1.66 1.94 7.70 16.27 1.78 4.85 2.52 5.46 4.85 8.50 1.88 0.00 0.00 3.87 2.93 3.83 4.75 3.59 4.55 3.32 3.15 0.41 1.73 12 E1b_E2a KnownJunction 0 0.00 0.00 8.52 14.92 4.33 2.90 0.00 1.68 2.86 4.97 0.00 0.00 0.00 2.47 0.00 6.84 0.00 2.49 0.00 2.68 3.15 0.00 3.67 13 ER2a ExonRegion 1 28.81 49.17 116.92 106.09 33.58 27.24 32.06 82.54 68.48 72.51 106.49 17.24 45.63 228.64 172.70 209.51 142.58 99.06 159.08 77.61 80.90 68.21 146.96 14 E2a_E3a KnownJunction 1 104.02 128.40 135.60 134.88 96.43 110.56 101.27 96.73 83.77 76.05 73.07 36.16 55.03 214.67 280.36 198.75 83.12 122.49 108.14 100.93 56.22 69.13 197.70 15 ER3a ExonRegion 0 49.39 112.72 139.60 128.21 181.00 194.51 109.38 103.01 88.25 66.79 102.67 41.54 71.69 193.73 178.70 148.32 121.90 85.00 76.15 119.96 74.03 42.36 108.38 16 E3a_E4a KnownJunction 0 33.56 151.68 158.36 133.92 246.43 306.87 146.27 102.23 88.89 61.84 114.71 32.26 74.51 136.44 175.78 129.71 189.34 60.44 66.73 120.68 100.45 30.49 64.88 17 ER4a ExonRegion 0 56.81 98.07 187.13 141.57 168.69 181.12 134.82 109.03 85.75 93.30 116.27 86.31 132.30 176.49 177.39 112.64 146.95 59.19 78.83 107.88 84.31 57.21 70.75 18 E4_Da NovelBoundary 0 6.30 21.97 5.77 25.20 20.46 0.00 7.91 33.11 28.62 3.89 0.00 0.00 6.49 6.95 0.00 11.28 0.00 4.39 9.60 17.45 6.12 16.59 4.10 19 E4a_E5b KnownJunction 1 179.59 85.38 276.63 244.59 102.21 127.48 89.47 138.58 120.37 114.83 155.30 154.85 329.04 458.71 430.68 224.21 233.19 136.26 148.24 153.27 154.13 112.85 185.58 20 E5_Aa NovelBoundary 0 38.60 65.12 16.17 44.85 26.91 18.74 38.51 19.22 23.50 9.24 9.48 0.00 22.40 27.49 5.19 24.52 13.00 6.38 19.20 19.37 16.37 5.57 24.50 21 ER5a ExonRegion 0 14.29 37.57 12.15 32.35 40.91 26.61 19.40 33.06 24.87 12.64 3.80 2.81 8.63 13.46 11.37 12.76 5.52 11.14 19.92 15.25 9.61 4.65 11.70 22 E5_Ab KnownBoundary 0 14.52 42.10 23.15 52.64 62.99 30.32 12.37 37.42 33.19 27.40 9.90 0.00 8.28 22.72 14.71 30.93 4.77 17.62 4.80 21.48 15.57 13.72 28.77 23 ER5b ExonRegion 0 77.36 68.25 281.55 248.27 112.47 79.20 68.80 166.65 149.84 135.57 139.95 132.75 240.61 333.02 354.15 216.10 207.62 116.43 135.65 142.84 135.69 134.59 162.27 24 E5a_E6a KnownJunction 0 114.84 93.93 312.05 238.73 87.35 87.28 98.70 176.78 168.29 135.41 167.73 137.44 154.54 206.43 273.57 137.91 270.31 92.15 125.09 153.98 210.72 81.20 111.91 25 ER6a ExonRegion 0 70.87 133.82 253.89 209.31 131.49 133.39 98.57 146.08 123.35 122.50 143.57 117.87 120.83 222.42 178.16 157.55 226.95 89.80 116.39 103.55 172.06 69.20 107.99 26 E6a_E7a KnownJunction 0 215.22 200.69 390.76 315.31 333.96 326.52 177.98 152.80 190.97 172.91 122.77 116.74 176.77 324.51 239.57 331.45 310.71 133.52 146.07 175.52 211.40 128.16 209.91 27 ER7a ExonRegion 0 72.90 97.30 163.51 158.35 155.55 121.92 89.30 118.33 99.04 84.94 131.80 126.83 180.01 214.30 250.39 172.53 179.48 62.30 93.30 83.76 84.40 101.22 108.32 28 E7_Da KnownBoundary 1 94.24 64.33 38.73 73.35 61.97 31.97 57.06 87.78 47.68 32.56 107.92 31.51 75.00 79.64 228.20 97.32 105.94 39.26 39.62 51.07 13.71 78.50 59.33 29 ER7b ExonRegion 0 32.61 22.50 23.36 28.32 30.35 16.96 15.97 13.83 23.93 16.45 49.71 15.96 35.91 41.01 89.39 37.24 43.22 11.49 14.04 13.90 2.07 41.02 19.36 30 E7_Db KnownBoundary 0 27.41 2.70 43.82 36.43 30.14 15.73 7.91 5.22 11.57 9.13 8.69 5.55 12.01 2.30 0.00 3.59 0.00 1.91 8.28 5.88 2.47 15.80 7.26 31 ER7c ExonRegion 1 15.07 6.35 8.17 6.19 13.95 6.06 2.41 11.37 13.96 8.17 17.92 31.88 16.20 22.54 96.97 24.77 20.01 3.70 26.06 18.44 4.01 38.83 18.33 32 E7_Dc KnownBoundary 1 88.09 78.87 28.92 39.86 93.29 77.91 83.73 58.74 66.20 42.60 46.96 55.97 19.97 54.39 226.96 111.25 61.90 56.96 122.17 109.62 40.53 100.67 91.94 33 E7c_E7c KnownJunction 0 3.33 0.00 2.90 1.63 0.00 0.00 0.00 2.51 0.00 7.95 2.58 7.20 6.98 5.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER7d ExonRegion 1 52.41 48.54 78.78 72.52 60.77 45.91 82.33 122.64 103.58 86.07 31.93 57.80 47.31 29.23 89.07 70.52 70.10 102.89 61.84 97.91 54.30 37.06 66.95 35 E7_Dd KnownBoundary 1 5952.39 5704.25 11038.97 12388.30 5752.55 3726.04 7681.97 12557.44 11923.98 11438.36 2372.18 811.91 1010.00 734.66 1647.08 5250.16 5595.69 12676.78 4731.71 6164.37 3887.46 2258.90 4857.93 36 E7d_E7b KnownJunction 1 8.89 23.22 48.43 60.83 6.96 8.57 14.84 35.08 25.49 40.02 7.00 64.97 98.69 4.41 0.00 6.49 14.77 37.93 0.00 11.82 3.15 0.00 6.32 37 ER7e ExonRegion 0 40.80 56.60 77.78 85.70 80.70 68.65 56.36 78.22 65.02 38.92 51.99 45.52 49.21 66.34 110.68 80.10 76.31 44.61 55.77 62.36 29.45 54.10 69.11 38 E7_Ab KnownBoundary 0 10320.79 8881.18 15479.02 14645.86 7459.51 5264.01 11230.62 14167.22 12331.41 12137.98 2691.79 1201.89 1524.90 1110.72 2730.83 9361.13 5855.44 18346.65 11983.22 9595.18 4339.55 4841.55 9325.24 39 ER7f ExonRegion 1 55.16 49.27 31.52 27.13 49.90 41.48 75.90 50.04 39.11 20.99 27.65 56.50 64.14 38.17 95.56 100.77 76.99 54.09 63.18 86.80 28.68 50.75 82.88 40 E7_Ac KnownBoundary 0 291.76 355.92 250.88 230.17 189.81 215.33 339.66 315.24 317.24 278.13 121.24 98.43 124.83 90.59 116.82 227.97 183.73 355.09 171.39 329.37 145.49 111.93 239.27 41 ER7g ExonRegion 0 20.26 17.52 34.45 44.96 65.68 34.87 50.75 59.71 41.97 33.40 32.61 28.45 46.40 52.26 104.39 33.17 40.10 11.88 20.57 35.12 17.83 50.77 23.87 42 ER7h ExonRegion 0 11.99 0.68 1.63 6.81 17.84 11.61 11.47 2.30 2.06 2.29 1.29 0.00 7.82 1.62 15.47 0.00 7.70 0.00 0.00 4.26 0.00 2.08 1.96