Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-487I9.1 Gene 0 1.89 1.30 1.75 1.17 2.48 0.82 1.35 1.48 0.65 0.16 0.19 2.65 3.64 0.60 2.18 1.33 0.95 0.29 0.20 0.75 1.55 0.93 1.59 2 426465 Transcript 0 0.00 0.00 0.00 0.00 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 445414 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 439759 Transcript 0 1.16 0.45 0.73 0.63 1.70 0.16 0.65 0.68 0.18 0.05 0.04 1.62 2.18 0.26 1.58 1.05 0.42 0.20 0.24 0.27 0.72 0.46 0.84 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2b ExonRegion 0 0.00 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.00 0.67 0.00 0.00 1.39 0.00 0.08 0.00 0.00 0.00 0.74 0.76 0.41 1.52 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 4.35 10 E3_Aa NovelBoundary 0 3.78 20.06 38.76 9.12 18.76 8.12 14.75 31.71 15.71 9.29 29.64 6.45 6.82 4.47 17.92 3.33 16.64 8.71 14.40 0.00 37.07 68.89 36.36 11 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.52 0.00 0.00 0.00 0.00 0.00 0.00 0.77 0.00 0.00 0.00 0.00 0.00 0.25 0.42 12 E3_Da NovelBoundary 0 10.59 6.64 14.34 6.76 20.80 43.55 2.12 14.83 14.03 1.67 25.69 0.00 6.82 7.42 13.35 0.00 0.00 1.53 14.40 2.62 44.79 38.58 16.22 13 E3_Db NovelBoundary 0 17.11 2.76 16.38 2.03 20.71 16.30 19.34 14.58 14.50 6.69 15.90 6.30 6.82 14.30 8.90 4.36 18.51 8.71 0.00 11.70 41.33 37.60 28.26 14 E3b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.99 0.00 0.00 17 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER5a ExonRegion 0 1.68 2.02 2.54 0.80 0.00 2.91 1.05 2.02 0.73 0.00 0.00 1.42 0.77 0.27 1.39 0.00 1.31 0.00 0.00 0.00 0.00 1.65 1.17 19 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 Ix_AR5 ActiveIntronRegion 0 14.91 9.43 8.74 7.19 15.69 3.42 6.62 13.98 4.38 3.44 3.87 4.33 17.91 0.81 6.46 0.00 3.75 1.85 0.00 2.13 2.20 0.00 9.61 21 Ix_AR4 ActiveIntronRegion 0 2.74 2.03 6.17 3.38 8.03 1.77 6.62 18.50 5.17 2.51 0.14 0.00 10.60 2.47 3.87 2.97 0.00 1.98 0.00 2.13 1.88 0.00 5.76 22 Ix_AR3 ActiveIntronRegion 0 0.66 5.59 8.81 6.05 5.35 0.00 6.12 15.45 2.70 2.08 1.93 0.81 8.50 2.64 0.00 5.94 0.00 2.43 0.00 2.13 2.20 0.00 2.94 23 ER6a ExonRegion 0 0.00 0.00 0.00 0.23 0.00 0.00 0.03 0.45 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E7_Aa NovelBoundary 0 21.04 2.63 12.36 8.46 0.00 0.00 13.25 4.11 1.68 3.33 4.84 12.60 6.82 2.47 13.35 8.63 8.13 0.00 0.00 5.82 5.37 0.00 8.02 26 ER7a ExonRegion 0 4.87 2.34 4.20 3.84 10.18 0.70 2.54 3.86 0.71 0.00 0.00 8.30 7.41 0.51 4.30 6.59 2.53 1.42 2.44 0.82 2.54 1.60 3.38 27 E7_Da NovelBoundary 0 3.78 0.00 19.90 13.88 0.00 0.00 0.00 3.70 0.00 0.00 4.53 6.30 6.82 0.00 0.00 0.00 0.00 0.00 0.00 2.56 6.30 2.33 4.35 28 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER8a ExonRegion 0 3.36 0.00 0.00 0.00 2.34 0.00 1.07 0.00 0.00 0.00 0.00 2.89 6.25 1.08 4.88 0.00 0.00 0.00 0.00 0.00 0.00 1.79 2.38 30 E8_Da NovelBoundary 0 6.96 3.35 14.46 9.32 8.49 0.00 4.50 12.77 4.98 4.49 1.95 6.30 12.17 2.47 10.01 0.00 3.93 0.00 0.00 5.11 0.00 3.06 4.35 31 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E9_Aa NovelBoundary 0 0.00 5.79 7.16 4.96 0.00 2.44 2.03 2.30 4.66 1.67 0.00 5.55 0.00 2.12 8.90 3.67 4.77 0.00 0.00 2.81 21.93 0.00 7.51 33 ER9a ExonRegion 0 3.34 2.20 3.05 2.20 4.47 0.90 2.86 2.53 1.09 0.50 0.38 4.98 8.16 1.05 4.13 1.75 1.62 0.54 0.00 1.88 3.68 1.22 2.60