Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NCRNA00182 Gene 0 84.23 97.06 59.18 93.02 88.55 22.19 115.36 78.26 84.75 46.91 16.51 39.01 42.96 15.14 32.74 38.68 42.91 56.15 93.66 114.95 39.58 26.51 73.30 2 430772 Transcript 0 15.45 14.09 7.03 9.82 19.43 9.16 26.59 14.82 15.84 11.59 9.30 18.44 17.92 10.25 7.38 11.08 17.04 9.53 29.20 46.70 19.32 25.73 26.71 3 429124 Transcript 0 50.95 56.00 33.03 54.33 51.86 15.98 68.40 51.78 58.47 30.20 12.91 18.52 21.64 8.00 21.02 24.41 36.44 44.98 51.40 71.16 29.91 11.07 41.54 4 418855 Transcript 1 14.74 19.70 21.92 28.15 14.17 13.96 26.41 18.33 30.75 18.31 34.44 4.68 19.45 10.18 13.78 31.63 80.64 43.03 48.12 48.01 50.56 16.91 62.56 5 455395 Transcript 0 5.24 2.78 5.74 7.81 3.63 2.18 8.38 8.03 2.23 3.29 1.72 4.28 3.81 0.51 2.52 3.13 3.97 2.66 4.67 8.21 5.76 9.26 25.32 6 423992 Transcript 0 9.49 11.09 6.73 3.52 9.51 0.78 15.84 9.35 11.22 5.35 0.82 10.17 15.69 1.07 7.07 10.16 5.28 20.01 9.60 19.07 7.21 6.88 17.60 7 ER1a ExonRegion 0 16.79 25.35 11.89 12.72 27.29 9.16 27.88 19.92 18.46 10.83 1.75 2.19 0.29 1.48 1.76 6.16 11.95 14.99 31.04 47.45 26.56 11.01 22.68 8 E1a_E6a KnownJunction 0 3.56 6.45 20.76 22.91 11.38 2.16 2.12 47.69 44.13 24.85 4.95 0.00 0.00 6.89 4.45 12.13 13.56 20.52 65.79 108.40 38.55 21.06 40.72 9 ER2a ExonRegion 0 29.90 26.93 8.82 17.11 26.67 15.32 37.75 17.74 26.53 14.12 7.30 1.17 8.01 4.19 10.47 26.97 26.56 48.03 32.99 40.54 20.39 5.59 36.84 10 E2a_E6a KnownJunction 0 2.96 2.57 7.54 10.79 0.00 8.18 10.82 26.86 35.18 15.74 14.90 0.00 0.00 4.94 8.90 8.72 38.24 25.62 3.76 37.07 34.84 2.39 11.95 11 ER3a ExonRegion 0 25.70 32.75 15.27 18.05 28.34 21.21 44.39 16.21 23.63 18.03 24.98 3.36 18.61 5.47 9.75 35.58 58.24 40.43 40.05 44.25 41.50 15.14 61.01 12 E3a_E6a KnownJunction 1 3.78 6.64 28.56 38.26 0.00 6.70 8.44 20.45 37.88 18.59 43.91 6.00 20.29 14.89 17.80 27.69 103.04 45.64 56.19 51.77 59.62 18.68 64.11 13 ER4a ExonRegion 0 10.48 5.55 5.99 7.53 3.78 1.57 13.14 7.02 3.30 6.58 0.75 0.91 0.80 1.02 5.05 6.25 7.94 5.32 9.35 13.17 6.21 15.77 36.38 14 E4a_E6a KnownJunction 0 0.00 0.00 5.50 8.09 3.48 2.78 3.62 9.04 1.16 0.00 2.68 7.65 6.82 0.00 0.00 0.00 0.00 0.00 0.00 3.26 5.31 2.76 14.26 15 E5_Aa NovelBoundary 0 5.93 11.91 13.48 10.55 20.12 0.00 38.11 9.57 10.50 2.87 2.42 12.15 6.01 4.94 0.00 17.69 7.76 20.60 13.46 37.78 20.70 7.41 27.91 16 ER5a ExonRegion 0 1.27 12.57 5.19 3.88 6.20 1.56 16.80 6.21 5.48 3.61 1.64 14.03 18.56 2.14 5.13 9.21 6.63 17.55 6.21 23.19 8.30 8.32 15.39 17 E5a_E6a KnownJunction 0 17.71 9.60 8.28 3.16 12.82 0.00 14.88 12.49 16.96 7.09 0.00 6.30 12.82 0.00 9.02 11.11 3.93 22.47 12.99 14.96 6.12 5.45 19.80 18 ER6a ExonRegion 0 42.58 41.90 79.92 90.38 55.26 30.19 105.03 91.68 130.76 79.06 37.96 32.71 46.67 36.54 39.35 121.51 86.47 149.76 170.37 228.69 113.02 64.88 177.85 19 E6b_E7a KnownJunction 0 27.71 102.88 85.09 104.08 170.88 101.19 251.20 112.05 154.28 90.66 46.43 30.61 71.42 44.62 28.43 66.56 124.36 142.77 124.62 229.14 140.73 51.13 124.54 20 ER6b ExonRegion 1 43.74 90.16 80.47 96.76 148.06 118.59 243.17 98.52 158.51 93.66 44.46 21.65 60.97 50.35 35.78 79.26 121.03 153.36 114.67 214.89 136.63 59.73 137.04 21 ER7a ExonRegion 0 75.51 144.78 88.31 96.57 97.73 54.79 160.18 91.73 128.71 77.27 39.22 50.64 55.22 49.32 46.08 94.46 95.19 109.52 145.15 220.86 136.39 54.24 144.92 22 E7a_E8a KnownJunction 0 252.64 182.66 75.46 123.59 63.75 42.42 137.08 109.13 143.29 85.56 39.06 76.37 114.12 59.04 95.19 77.24 132.30 121.67 231.44 280.47 136.96 113.40 127.96 23 ER8a ExonRegion 0 168.89 125.24 68.98 126.95 70.28 49.40 142.13 100.40 130.20 77.01 42.69 55.14 86.08 60.67 76.37 114.25 114.66 109.45 220.26 245.06 119.58 91.43 176.80 24 E8_Da KnownBoundary 0 171.81 98.54 72.47 145.84 96.35 57.58 183.01 111.84 139.35 69.79 41.12 50.27 70.45 54.74 60.82 134.75 108.56 101.27 245.28 244.87 104.59 82.48 224.76 25 ER8b ExonRegion 0 148.65 112.52 65.86 149.15 75.68 44.23 165.58 112.15 154.06 74.91 45.58 76.63 65.50 56.09 49.76 98.77 88.90 123.09 188.15 262.87 109.60 86.50 177.67 26 E8_Db KnownBoundary 0 94.46 45.85 30.60 86.00 34.21 24.25 57.76 68.76 80.73 36.91 11.11 35.71 12.82 24.66 13.35 47.77 27.86 66.33 90.64 84.75 39.11 15.43 66.84 27 E8_Dc KnownBoundary 0 63.34 67.29 43.82 58.30 42.78 20.27 87.97 44.85 59.46 23.67 11.69 12.30 39.93 0.00 20.03 32.21 38.80 46.22 29.55 132.95 30.02 11.70 43.79 28 E8c_E9a KnownJunction 0 3.70 2.76 6.18 9.92 7.30 11.70 7.77 7.52 13.98 13.51 14.64 6.30 13.64 21.54 4.45 14.36 16.64 9.70 20.61 22.31 22.67 35.45 32.86 29 ER8c ExonRegion 0 128.81 105.75 70.02 140.38 74.54 43.75 133.72 114.82 153.33 77.33 42.52 67.42 72.36 48.49 38.13 86.19 78.28 124.86 125.59 231.61 84.37 64.89 124.18 30 ER8d ExonRegion 0 119.99 138.52 82.72 135.10 128.91 24.43 156.64 110.74 113.68 60.75 16.54 54.39 56.93 14.86 43.70 37.54 44.53 61.30 117.46 135.86 34.49 25.24 75.82 31 E8_Dd NovelBoundary 0 119.58 69.86 86.93 95.53 46.52 12.49 144.99 99.44 82.99 28.02 2.53 18.31 20.13 12.07 41.91 53.23 49.28 64.25 134.31 78.62 31.57 14.88 76.66 32 I8 Intron 0 161.41 126.04 87.65 136.68 132.88 28.13 142.60 91.97 88.67 52.66 13.37 38.14 50.66 13.46 47.15 46.61 40.81 68.45 114.95 128.34 36.70 24.38 77.23 33 I8_SR1 SilentIntronRegion 0 234.61 172.18 103.59 143.08 154.56 26.36 150.82 113.96 100.17 61.29 15.45 36.37 51.24 14.35 56.40 57.46 48.47 97.91 144.46 132.06 48.85 25.54 100.12 34 I8_AR1 ActiveIntronRegion 0 75.88 83.70 89.10 140.63 108.75 30.23 143.54 70.17 86.04 42.11 11.75 42.30 35.13 13.21 36.12 36.27 35.53 41.55 94.92 124.12 26.98 27.09 53.22 35 I8_SR2 SilentIntronRegion 0 68.32 61.96 58.04 123.47 104.97 30.46 127.49 62.29 69.09 42.00 10.35 39.50 57.08 11.98 35.56 31.77 29.40 27.45 70.71 123.88 19.16 21.04 46.92 36 E9_Aa NovelBoundary 0 70.38 50.19 92.78 205.57 57.98 32.65 71.68 83.75 102.37 43.81 16.32 77.13 60.71 9.59 22.25 20.17 41.61 7.79 29.74 85.27 10.07 17.82 40.97 37 ER9a ExonRegion 0 38.99 24.79 3.36 12.86 53.13 25.73 68.92 11.37 13.91 12.68 24.09 55.09 64.78 18.67 19.13 25.50 37.79 11.94 24.56 64.69 25.87 38.80 47.16 38 E9_Da NovelBoundary 0 33.93 64.00 38.97 100.05 43.29 26.80 95.61 74.84 94.15 44.11 9.74 29.71 34.09 9.30 9.89 20.93 39.74 32.17 42.07 80.28 15.38 23.15 77.00 39 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 12.22 0.00 1.94 1.77 3.12 4.62 4.79 30.46 0.00 2.24 0.00 0.00 12.81 0.00 4.80 3.26 0.00 25.35 3.41 40 I9 Intron 1 83.50 175.42 118.36 247.00 140.09 48.13 179.69 118.88 124.34 76.86 9.42 40.66 59.71 6.45 34.54 49.21 47.79 57.70 113.49 166.03 39.94 25.00 74.35 41 I9_SR1 SilentIntronRegion 0 46.06 95.61 43.28 110.72 77.80 32.73 137.47 64.54 63.17 42.33 5.09 32.56 44.57 5.73 19.96 25.60 29.91 21.21 62.02 82.11 17.08 21.32 40.49 42 I9_AR1 ActiveIntronRegion 0 78.61 114.32 46.91 163.64 76.07 52.39 184.22 58.52 74.37 40.39 10.22 23.50 15.41 4.87 14.09 36.09 47.86 53.58 85.55 153.65 35.73 33.34 56.43 43 I9_AR2 ActiveIntronRegion 1 94.15 146.29 107.97 273.12 137.11 51.09 198.98 117.24 137.63 73.50 13.65 32.86 52.89 5.35 34.51 47.07 51.27 54.00 94.86 206.72 31.74 19.79 59.61 44 I9_SR2 SilentIntronRegion 1 94.67 154.92 163.56 303.93 171.18 57.23 200.63 136.95 149.06 88.88 9.84 55.62 65.75 6.08 44.03 60.77 52.44 68.04 118.44 213.03 30.70 27.24 79.57 45 I9_AR3 ActiveIntronRegion 0 93.14 274.44 145.86 331.23 171.42 50.89 189.59 144.99 155.89 85.73 10.86 44.60 73.16 8.04 36.11 59.86 47.49 62.83 157.83 191.81 53.04 26.12 90.11 46 I9_AR4 ActiveIntronRegion 0 90.00 294.59 204.72 386.90 177.15 42.30 174.07 168.09 224.31 109.61 12.83 40.83 101.69 12.11 50.11 83.02 68.42 93.77 245.49 247.92 95.96 26.00 153.97 47 I9_SR3 SilentIntronRegion 1 107.95 253.48 159.81 289.77 173.86 56.14 194.84 156.20 144.64 106.78 10.34 40.57 68.43 7.18 43.14 61.90 63.20 93.43 153.47 177.83 73.52 30.77 110.20 48 I9 Intron 0 91.27 141.33 111.10 184.38 96.69 40.59 121.36 88.03 78.59 46.94 8.66 41.10 58.18 7.99 30.86 33.32 34.82 44.38 67.06 122.08 26.24 18.19 46.80 49 I9_SR1 SilentIntronRegion 1 316.52 386.84 503.55 675.25 308.18 98.20 184.24 412.36 264.12 180.65 21.47 42.88 60.48 9.06 71.04 68.89 52.37 172.40 148.63 167.37 39.04 44.36 88.91 50 I9_AR1 ActiveIntronRegion 1 62.71 192.94 270.61 341.59 133.05 50.99 95.19 140.40 140.46 89.20 9.86 27.28 51.48 10.67 66.62 43.48 52.81 74.51 105.95 123.24 33.48 34.75 68.11 51 I9_AR2 ActiveIntronRegion 1 34.14 200.79 73.95 100.26 39.79 14.27 36.32 33.74 31.15 24.63 1.43 27.29 45.07 5.08 13.12 17.83 24.11 5.54 29.64 37.47 8.72 8.61 23.24 52 I9_AR3 ActiveIntronRegion 1 221.00 453.46 300.62 397.86 243.95 73.40 173.38 203.68 158.71 119.91 8.08 56.76 74.29 6.20 56.00 38.51 39.97 49.70 101.00 132.94 23.75 37.19 42.81 53 I9_SR2 SilentIntronRegion 1 116.85 185.99 144.63 196.80 134.33 54.29 110.55 91.79 87.21 51.94 10.38 28.69 58.82 7.05 41.29 32.07 40.92 52.84 80.74 116.30 35.34 19.02 53.83 54 I9_AR6 ActiveIntronRegion 1 7.94 17.29 52.38 46.68 42.37 33.01 46.78 40.19 25.01 13.95 2.26 12.63 56.28 9.74 38.44 13.87 12.65 24.17 38.49 42.55 26.63 3.99 14.19 55 I9_AR7 ActiveIntronRegion 1 137.48 231.59 223.77 350.43 177.58 82.17 218.12 181.01 152.27 98.98 14.94 58.06 107.56 11.99 59.05 66.53 69.94 73.18 150.41 189.71 46.22 37.41 88.95 56 I9_SR3 SilentIntronRegion 0 55.63 78.04 62.82 141.50 65.98 35.49 122.96 53.67 61.63 32.36 7.77 47.41 60.32 8.39 25.82 28.81 33.31 34.53 55.76 129.45 22.37 15.89 42.48 57 I9_AR8 ActiveIntronRegion 0 83.39 127.14 41.43 104.62 58.71 27.67 115.75 40.49 39.66 17.51 8.82 46.63 57.99 7.08 19.96 32.78 34.27 30.00 58.61 123.59 27.93 12.85 42.43 58 I9_SR4 SilentIntronRegion 0 43.00 55.69 30.39 68.13 40.94 17.59 78.02 36.42 39.14 20.05 4.48 24.34 37.10 7.60 14.61 22.18 18.36 23.72 30.68 81.44 19.10 7.22 32.29 59 E10_Aa NovelBoundary 1 153.95 70.51 60.55 154.99 127.76 36.46 217.59 122.15 101.01 55.12 9.84 53.27 114.77 19.31 9.15 41.10 46.00 34.03 69.46 148.99 5.50 11.63 43.36 60 I9_AR9 ActiveIntronRegion 1 0.67 15.53 4.18 11.96 19.82 1.25 18.96 13.59 9.71 4.85 0.00 11.02 45.83 0.44 6.20 4.46 0.00 7.98 9.12 23.02 3.21 2.18 10.28 61 ER10a ExonRegion 0 29.67 25.18 0.00 0.52 5.26 6.23 50.88 0.63 1.46 3.02 5.61 16.60 28.84 10.67 14.51 8.32 9.46 0.00 28.40 34.11 2.28 22.71 13.41 62 IG1 Intergenic 0 37.84 84.15 45.11 112.09 55.40 14.96 90.33 84.77 74.61 39.78 8.64 62.88 87.34 8.89 21.85 23.04 23.07 14.87 29.35 101.53 9.49 18.96 26.06 63 IG1_AR3 ActiveIntergenicRegion 0 48.91 106.89 50.02 120.88 68.04 20.45 118.17 101.75 90.21 46.80 11.31 74.43 94.80 12.42 24.91 28.80 27.28 17.87 32.40 117.41 10.45 24.62 28.78 64 IG1_SR2 SilentIntergenicRegion 0 60.31 151.77 72.40 142.44 85.43 18.72 93.55 125.43 98.73 62.32 11.47 80.22 98.01 8.78 30.61 20.21 24.86 13.37 28.17 107.62 7.64 28.69 24.68 65 IG1_AR2 ActiveIntergenicRegion 0 22.28 44.88 46.53 133.80 43.61 11.68 87.63 75.41 72.24 36.31 6.90 58.40 110.45 7.87 17.98 19.57 16.72 12.75 24.99 103.43 6.53 17.27 27.79 66 IG1_AR1 ActiveIntergenicRegion 0 18.13 36.46 16.37 67.62 29.85 3.65 52.75 46.72 37.79 15.68 3.47 49.47 65.94 2.89 12.10 13.03 13.81 6.24 26.03 57.69 7.47 5.79 14.04 67 IG1_SR1 SilentIntergenicRegion 0 15.75 30.48 17.72 53.19 19.62 6.52 34.83 29.99 30.56 15.30 3.54 26.94 37.69 3.95 14.98 20.19 23.13 15.66 29.88 73.40 13.77 2.92 24.38