Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CITED1 Gene 0 3.13 7.79 5.09 4.12 1.09 2.66 2.07 0.82 0.80 1.34 0.00 0.00 0.00 0.19 0.37 0.43 0.29 41.52 37.33 24.50 2.75 2.36 1.11 2 373619 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 1.93 0.00 0.00 0.00 0.00 3 453707 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 246139 Transcript 0 0.00 3.39 2.16 2.07 0.00 1.25 0.08 0.00 0.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.82 35.92 23.50 0.00 0.00 0.00 5 454225 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 431381 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 445983 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 417400 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 450875 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 427412 Transcript 0 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.00 0.00 6.89 3.01 2.29 0.78 0.00 0.67 11 429794 Transcript 0 0.00 0.00 1.63 3.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.90 3.95 3.13 0.00 0.00 0.00 12 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.24 14 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.51 0.00 0.00 0.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.65 4.94 2.60 0.00 0.00 0.00 15 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 5.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 3.86 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 0.00 3.57 1.36 0.67 0.00 0.00 0.16 0.00 1.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.47 24.97 8.46 0.00 0.00 0.00 17 E2_Ab KnownBoundary 0 0.00 10.06 2.66 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.43 42.45 20.01 0.00 0.00 0.00 18 ER2b ExonRegion 0 0.26 2.37 1.09 0.44 0.00 1.05 0.77 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.73 8.95 5.32 0.27 0.26 0.73 19 E2a_E4b KnownJunction 0 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.66 8.66 8.44 0.00 0.00 0.00 20 E2a_E5a KnownJunction 0 0.00 3.22 2.96 3.46 0.00 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48.17 46.87 38.54 0.00 0.00 0.00 21 ER2c ExonRegion 0 0.00 9.38 2.79 2.50 0.00 3.46 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48.25 52.20 32.51 0.61 0.46 0.00 22 ER3a ExonRegion 0 0.00 0.00 0.00 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.47 0.00 1.16 0.00 23 ER3b ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.76 0.00 2.13 0.00 2.08 0.00 24 ER3c ExonRegion 0 0.00 0.00 1.06 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 8.52 0.38 1.33 1.68 1.12 0.00 25 E3_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.04 11.95 6.07 0.00 0.00 0.00 26 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 3.58 0.00 0.00 0.00 0.00 27 E3a_E5a KnownJunction 0 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER4a ExonRegion 0 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.00 0.00 6.89 3.01 2.29 0.78 0.00 0.67 29 E4_Ab KnownBoundary 0 0.00 3.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.06 4.80 0.00 0.00 0.00 4.27 30 ER4b ExonRegion 0 1.80 12.39 0.00 0.83 0.00 0.00 0.85 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.26 26.20 11.90 0.00 1.77 0.44 31 E4_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.46 9.32 3.26 0.00 2.39 0.00 32 E4a_E5a KnownJunction 0 0.00 0.00 0.00 2.76 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.77 9.22 36.11 0.00 0.00 0.00 33 I4_AR1 ActiveIntronRegion 0 0.89 13.27 0.38 0.43 1.12 0.00 0.00 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.00 0.62 0.00 18.71 15.36 1.79 0.00 0.00 0.00 34 E5_Aa NovelBoundary 0 11.04 0.00 0.00 3.73 3.99 2.38 0.00 4.35 1.48 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 30.51 12.80 10.48 0.00 0.00 0.00 35 ER5a ExonRegion 0 4.23 21.43 9.27 9.07 8.91 11.58 3.44 0.00 0.20 2.89 0.00 0.00 0.00 1.02 1.52 2.26 2.51 132.49 80.73 59.13 2.40 2.30 0.00 36 E5_Ab KnownBoundary 0 7.26 7.83 16.03 15.12 10.70 10.39 0.00 0.00 1.19 4.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 202.09 116.14 78.62 5.37 5.08 0.00 37 ER5b ExonRegion 0 2.74 10.97 16.90 18.92 4.20 5.94 0.09 2.03 1.24 5.06 0.00 0.00 0.00 0.00 0.00 2.36 1.37 229.22 187.99 89.76 3.80 10.17 2.08 38 E5a_E6a KnownJunction 0 10.15 11.45 19.37 19.24 8.49 2.44 0.00 4.44 1.10 4.32 0.00 0.00 0.00 0.00 0.00 0.00 4.77 192.59 161.32 110.19 3.15 7.65 3.50 39 ER6a ExonRegion 0 6.40 5.63 18.76 11.99 3.16 2.59 0.00 2.93 0.22 7.41 0.00 0.00 0.00 0.00 0.00 1.75 2.29 141.71 98.01 95.42 19.72 2.51 0.75 40 E6_Da KnownBoundary 0 3.78 6.18 20.84 7.76 0.00 2.84 0.00 2.01 0.00 8.09 0.00 0.00 0.00 0.00 0.00 6.84 0.00 90.45 68.24 97.28 33.48 0.00 0.00 41 ER6b ExonRegion 0 6.20 11.08 12.22 10.37 4.61 4.92 6.10 0.88 0.39 5.93 0.00 0.00 0.00 0.00 1.51 3.62 0.00 72.60 44.60 61.58 9.04 2.84 0.00 42 E6_Db KnownBoundary 0 9.41 25.85 17.83 15.48 4.33 0.00 4.06 1.93 1.53 5.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 99.82 29.84 49.15 8.22 2.45 0.00 43 E6b_E6b KnownJunction 0 0.00 0.00 1.63 3.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.90 3.95 3.13 0.00 0.00 0.00 44 ER6c ExonRegion 0 20.86 35.40 20.42 12.76 2.64 7.62 7.85 4.25 1.47 4.27 0.00 0.00 0.00 1.04 0.00 1.61 2.03 101.94 100.82 88.62 15.29 14.99 1.80 45 E6_Dc KnownBoundary 0 21.78 31.38 12.12 4.83 0.00 5.11 3.80 0.00 1.79 1.50 0.00 0.00 0.00 2.47 0.00 0.00 0.00 88.59 45.27 40.08 8.34 9.37 0.00 46 E6_Dd KnownBoundary 0 3.70 6.31 9.40 5.33 6.79 2.73 10.11 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.32 27.01 19.94 2.97 0.00 0.00 47 ER6d ExonRegion 0 14.53 17.35 13.40 6.00 1.43 5.38 6.97 0.81 1.24 2.29 0.00 0.00 0.00 1.62 0.00 1.19 0.00 50.51 50.75 42.13 8.52 6.25 0.00 48 ER6e ExonRegion 0 2.38 12.57 7.21 4.03 1.62 7.57 7.65 0.90 0.28 2.67 0.00 0.00 0.00 0.23 1.59 0.00 0.00 29.62 31.99 35.39 4.35 3.87 0.00 49 E6_De KnownBoundary 0 0.00 9.41 10.97 5.79 0.00 7.27 5.70 4.31 1.79 3.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.29 29.74 43.66 0.00 6.18 0.00 50 ER6f ExonRegion 0 1.27 6.08 12.69 9.00 0.00 4.42 1.53 1.10 1.60 2.36 0.00 0.00 0.00 0.69 1.13 0.00 0.00 74.30 54.34 35.57 3.09 6.77 5.98 51 E6_Df KnownBoundary 0 0.00 3.35 14.04 7.52 0.00 0.00 0.00 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61.23 68.14 29.72 0.00 3.12 7.94 52 E6f_E6b NovelJunction 0 0.00 0.00 7.24 4.06 0.00 0.00 0.00 0.00 1.79 3.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.87 0.00 0.00 0.00 0.00 0.00 53 E6_Ab KnownBoundary 0 0.00 3.29 2.87 6.83 0.00 0.00 0.00 2.18 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.30 59.58 32.21 0.00 0.00 0.00 54 ER6g ExonRegion 0 0.00 8.39 13.63 10.90 0.00 1.83 2.15 1.73 1.24 3.44 0.00 0.00 0.00 0.20 0.00 0.00 0.00 93.77 115.87 50.80 3.31 6.25 5.87 55 ER6h ExonRegion 0 7.73 13.01 6.56 6.98 1.21 3.51 4.83 2.16 3.48 1.61 0.00 0.00 0.00 0.36 0.46 0.00 0.00 48.81 64.13 28.24 3.17 1.94 2.86 56 ER6i ExonRegion 0 10.58 6.10 1.23 2.73 0.00 0.00 2.65 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.47 22.30 2.13 0.00 0.00 0.00 57 ER6j ExonRegion 0 10.58 6.10 1.23 2.73 0.00 0.00 2.65 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.54 22.30 0.00 0.00 0.00 0.00 58 ER6k ExonRegion 0 9.07 5.81 0.88 1.75 0.00 0.00 1.51 0.00 0.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.22 15.47 0.00 0.00 0.00 0.00