Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-622K12.1 Gene 0 198.20 332.09 207.72 192.39 228.47 137.62 127.17 128.98 157.03 131.93 189.75 98.39 87.41 125.20 196.70 150.99 140.97 87.69 226.54 141.96 148.65 200.97 115.14 2 437625 Transcript 0 4.37 4.70 1.26 1.36 8.70 10.66 7.74 1.03 1.00 1.11 11.48 1.08 1.17 11.57 13.33 15.60 5.05 5.54 5.28 5.12 11.43 12.31 15.78 3 374922 Transcript 1 22.25 188.93 109.19 140.96 63.00 25.09 27.11 43.19 63.54 57.58 2.24 17.75 28.56 6.20 11.41 5.65 2.03 1.97 30.10 52.10 1.50 47.67 5.45 4 423617 Transcript 0 0.00 0.00 1.83 0.00 0.00 0.00 4.46 2.46 0.00 3.98 0.00 6.30 0.00 2.47 4.45 0.00 0.00 2.03 0.00 0.00 5.68 3.06 0.00 5 451583 Transcript 0 0.00 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 0 8.73 9.41 2.53 2.73 17.39 21.32 15.47 2.05 2.01 2.22 22.95 2.16 2.35 23.14 26.66 31.21 10.11 11.09 10.55 10.24 22.86 24.61 31.57 7 ER1b ExonRegion 1 195.79 243.27 138.02 120.20 349.64 544.88 331.65 121.90 148.57 124.81 310.00 15.44 20.07 213.70 357.78 518.99 254.88 339.81 647.22 216.65 306.07 331.15 413.01 8 E1_Ac KnownBoundary 0 166.33 173.98 123.98 105.41 349.07 368.42 217.28 87.49 128.41 110.64 160.30 49.22 88.47 96.42 200.88 422.88 193.08 275.79 701.10 182.23 156.42 136.92 252.25 9 E1_Ad KnownBoundary 0 60.60 23.09 81.87 61.86 52.89 26.06 22.08 73.48 91.06 62.70 54.70 12.45 33.28 39.85 128.19 75.19 42.54 75.69 121.04 40.65 59.68 49.05 55.91 10 ER1c ExonRegion 0 110.06 107.78 132.41 110.31 226.81 231.92 132.94 109.10 151.34 120.63 141.33 39.47 66.76 76.05 155.81 309.98 148.15 268.68 486.61 132.16 149.59 120.72 212.82 11 ER1d ExonRegion 1 102.42 56.44 169.79 100.53 40.91 33.58 20.80 159.36 168.13 143.87 341.02 27.91 36.33 203.72 218.54 172.82 283.01 118.04 227.23 160.70 387.09 249.74 139.49 12 E1_Da KnownBoundary 1 253.90 146.03 316.25 231.64 41.68 67.86 31.31 247.92 262.41 272.38 349.19 29.86 20.78 441.41 712.53 608.73 328.19 297.68 830.71 294.59 277.13 811.34 541.89 13 E1a_E2a KnownJunction 0 0.00 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1e ExonRegion 1 468.69 385.09 295.27 193.53 220.85 155.65 81.00 244.14 258.00 228.23 352.46 64.21 44.07 250.91 448.63 444.95 227.48 328.71 617.15 242.29 252.70 344.33 362.62 15 E1b_E2a KnownJunction 0 897.20 1091.52 324.38 163.45 699.15 331.68 277.03 222.91 248.93 212.21 471.96 279.24 161.68 198.19 340.57 112.96 226.18 127.97 146.36 204.28 166.49 339.29 103.46 16 E1b_E3a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 4.46 2.46 0.00 3.98 0.00 6.30 0.00 2.47 4.45 0.00 0.00 2.03 0.00 0.00 5.68 3.06 0.00 17 ER2a ExonRegion 0 771.02 1175.22 391.59 238.83 681.81 625.99 521.39 255.34 302.72 232.84 451.38 183.76 149.86 237.28 371.04 149.60 265.17 102.92 166.09 249.51 227.09 365.44 107.30 18 E2_Da KnownBoundary 0 84.90 1127.17 499.51 333.06 773.26 1103.29 940.84 314.30 381.77 281.78 508.66 225.07 144.96 338.57 422.15 156.88 266.95 101.15 227.11 313.64 257.12 447.37 150.50 19 E2a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER2b ExonRegion 0 225.58 674.93 512.05 393.60 1353.83 622.82 727.48 318.60 401.46 308.31 616.95 291.02 213.35 357.28 471.64 226.69 306.74 124.37 299.71 310.29 244.61 455.04 167.07 21 E2b_E3a KnownJunction 1 214.41 285.15 683.68 507.66 350.00 69.85 92.43 382.65 444.01 342.19 503.81 434.69 782.74 290.19 354.04 446.46 294.44 169.34 257.04 390.53 231.54 423.00 268.13 22 ER2c ExonRegion 0 177.23 262.33 604.56 467.76 611.48 112.73 164.73 363.25 443.60 336.83 550.57 324.25 530.71 293.97 362.50 368.54 325.92 164.06 255.00 345.69 248.44 396.42 234.16 23 I2_AR1 ActiveIntronRegion 0 27.27 24.71 31.37 27.31 18.69 6.96 16.10 31.21 36.44 17.71 3.59 13.96 38.69 4.24 5.17 18.53 7.67 14.83 25.01 18.16 5.00 0.30 17.51 24 I2_AR2 ActiveIntronRegion 0 17.81 11.29 18.77 14.42 10.81 3.91 16.76 26.31 21.65 16.97 2.28 7.55 25.74 2.87 7.91 18.79 6.36 6.84 14.01 14.03 2.75 1.76 12.13 25 I2_SR4 SilentIntronRegion 0 6.47 4.91 7.58 5.67 2.83 0.76 3.90 10.59 32.15 7.80 1.31 4.06 6.97 0.88 3.76 5.38 3.36 7.55 9.25 3.93 2.33 0.24 9.19 26 I2_AR7 ActiveIntronRegion 0 12.59 6.86 8.06 11.74 8.73 0.00 6.76 13.56 55.89 11.64 1.00 5.96 6.51 0.52 6.12 7.44 5.23 15.94 14.52 4.87 1.84 0.00 19.49 27 I2_SR5 SilentIntronRegion 0 10.46 7.76 14.74 11.73 7.16 0.81 5.59 15.86 59.49 10.84 2.30 4.10 8.84 1.94 5.27 7.56 4.28 14.82 11.51 8.44 5.88 0.26 14.46 28 I2_AR8 ActiveIntronRegion 1 14.96 20.20 16.46 19.55 12.33 2.07 6.91 22.42 67.67 14.35 1.39 19.01 38.34 1.24 10.29 12.17 6.42 20.78 20.23 14.60 6.09 0.43 25.86 29 I2_SR6 SilentIntronRegion 0 4.37 4.42 8.68 6.51 3.77 0.52 5.64 6.44 42.19 5.80 1.44 6.09 5.19 1.17 2.00 5.73 3.68 7.35 6.16 4.94 2.69 0.29 12.54 30 I2_AR9 ActiveIntronRegion 0 0.00 4.52 11.30 4.47 0.00 0.00 2.50 10.56 42.06 10.96 3.87 0.00 0.00 1.62 10.96 2.97 6.60 7.80 3.19 16.31 1.35 0.00 8.65 31 I2_SR7 SilentIntronRegion 0 6.87 4.76 9.86 5.60 3.63 0.83 3.20 10.69 33.08 8.78 0.95 3.77 6.76 0.95 4.65 5.05 2.49 7.62 8.53 4.26 2.41 0.00 8.98 32 I2_AR11 ActiveIntronRegion 0 14.65 7.73 10.21 11.93 8.84 0.71 6.62 11.74 51.14 12.59 1.49 3.77 9.56 0.92 11.43 10.12 5.59 8.43 14.41 6.16 2.62 0.81 15.97 33 I2_SR8 SilentIntronRegion 0 12.56 8.39 14.77 11.04 5.96 0.35 6.18 13.39 59.77 8.79 1.70 5.20 6.06 1.50 5.64 5.53 5.99 14.21 10.41 7.03 5.10 0.52 17.70 34 I2_AR12 ActiveIntronRegion 1 14.07 15.43 16.31 18.98 10.01 2.10 6.74 17.39 71.68 14.56 1.61 25.10 38.18 2.35 11.66 8.03 9.26 15.83 15.56 11.92 7.10 0.65 18.30 35 I2_SR9 SilentIntronRegion 0 4.12 4.22 7.23 5.88 3.22 1.30 4.27 6.26 35.70 6.90 0.92 3.71 5.47 0.65 2.77 4.24 3.76 8.25 6.42 5.67 2.65 0.00 12.36 36 ER3a ExonRegion 0 128.96 198.58 613.35 460.58 176.51 106.59 93.82 381.72 422.28 331.07 475.26 564.65 384.83 489.00 880.10 519.29 314.28 187.76 817.52 389.36 277.13 737.86 355.80 37 E3_Da KnownBoundary 0 123.87 293.83 588.33 485.69 216.89 131.91 115.13 368.97 409.66 348.40 559.62 379.47 202.42 433.46 784.10 295.82 434.22 141.85 738.47 387.72 420.02 619.38 255.58 38 ER3b ExonRegion 1 134.34 358.71 431.16 379.55 152.52 98.98 110.51 242.61 332.66 286.06 566.94 242.27 142.60 253.82 361.75 145.39 490.67 97.71 339.71 284.19 500.39 488.19 137.07 39 E3_Db KnownBoundary 0 327.98 597.00 387.69 338.55 160.87 119.59 143.62 211.90 268.52 207.54 267.80 309.25 143.50 189.42 264.17 128.34 225.43 76.65 215.63 240.39 256.87 286.88 106.28 40 ER3c ExonRegion 0 713.93 816.31 236.05 259.63 505.23 153.40 232.11 166.13 189.90 159.15 236.93 242.01 215.32 172.67 298.76 212.12 224.40 79.55 351.78 173.54 233.61 238.87 141.36 41 E3_Dc KnownBoundary 1 61.86 337.57 133.64 179.93 75.13 29.13 50.39 92.33 86.69 99.95 0.00 18.31 40.74 20.25 41.41 3.25 0.00 1.70 43.86 77.28 12.91 58.54 11.61 42 ER3d ExonRegion 1 22.25 188.93 109.19 140.96 63.00 25.09 27.11 43.19 63.54 57.58 2.24 17.75 28.56 6.20 11.41 5.65 2.03 1.97 30.10 52.10 1.50 47.67 5.45 43 IG17_AR1 ActiveIntergenicRegion 0 11.03 6.69 6.51 13.92 10.99 3.52 7.62 5.68 16.65 8.90 0.53 1.96 3.18 0.00 1.12 0.00 0.00 0.51 4.37 12.83 2.41 2.29 1.61