Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ACRC Gene 0 28.86 14.69 23.43 18.99 19.52 11.62 11.51 11.17 16.28 12.59 5.39 11.07 14.33 14.08 14.73 11.09 11.58 11.89 4.58 15.49 6.14 6.10 5.42 2 373696 Transcript 0 1.61 1.91 1.39 2.00 1.70 0.61 0.60 0.78 0.86 0.38 0.00 0.00 0.00 0.52 0.00 3.71 0.50 1.11 0.00 0.65 0.02 0.00 0.00 3 373695 Transcript 0 8.78 7.02 5.24 3.56 10.05 5.34 14.45 2.63 4.83 4.49 3.31 7.94 10.75 5.95 14.35 8.68 6.75 5.32 6.37 12.46 6.02 2.51 8.67 4 471950 Transcript 0 21.70 16.06 19.32 16.41 14.90 7.94 9.51 11.51 13.36 7.96 2.31 5.58 1.89 5.60 10.83 5.08 9.76 12.70 5.51 13.96 6.15 2.88 3.47 5 IG41_SR2 SilentIntergenicRegion 0 11.08 4.80 12.84 15.32 9.20 6.21 11.28 7.27 8.21 5.97 1.29 7.63 6.28 1.58 3.41 4.27 5.76 3.58 2.78 8.08 1.70 1.39 3.02 6 ER1a ExonRegion 0 4.82 3.70 4.16 4.62 2.44 0.00 1.81 2.35 2.58 0.00 0.00 0.00 0.00 1.57 0.00 4.48 1.50 3.33 0.00 1.94 0.06 0.00 0.00 7 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 8.78 7.02 5.24 3.56 10.05 5.34 14.45 2.63 4.83 4.49 3.31 7.94 10.75 5.95 14.35 8.68 6.75 5.32 6.37 12.46 6.02 2.51 8.67 9 E2_Ab KnownBoundary 0 24.08 17.76 15.73 9.52 47.03 5.17 32.28 3.78 10.16 9.40 0.00 0.00 6.33 0.00 0.00 4.19 8.98 4.56 0.00 8.63 5.00 2.88 0.00 10 ER2b ExonRegion 0 12.77 9.76 5.86 4.43 19.22 3.82 9.49 0.58 6.63 3.48 4.96 0.00 9.15 3.09 1.89 4.95 6.71 2.03 0.00 10.14 2.68 3.47 0.00 11 E2_Da NovelBoundary 0 7.41 3.35 18.30 22.27 3.65 0.00 3.36 8.34 5.18 4.24 0.00 0.00 6.82 0.00 0.00 3.67 8.51 2.40 0.00 5.75 3.15 0.00 0.00 12 E2a_E3a KnownJunction 0 7.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.16 0.00 5.37 0.00 0.00 9.24 0.00 0.00 8.98 0.00 0.00 2.68 2.47 2.94 0.00 13 E3_Aa NovelBoundary 0 17.86 2.76 7.21 1.43 28.27 8.12 22.66 6.90 11.60 3.92 2.68 0.00 0.00 0.00 5.19 3.25 8.88 0.00 4.80 5.75 2.72 0.00 4.35 14 ER3a ExonRegion 0 7.75 0.00 2.45 0.00 2.62 0.00 6.14 1.21 1.34 0.00 2.06 0.00 0.00 5.77 2.04 2.40 4.00 1.85 0.00 1.81 1.97 0.75 0.00 15 E3_Da NovelBoundary 0 15.78 0.00 3.13 11.02 4.33 0.00 2.25 4.39 6.77 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 12.08 2.97 0.00 4.35 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 3.92 0.00 3.50 2.20 0.55 1.56 1.32 2.08 4.54 0.44 0.00 1.02 0.00 2.87 2.99 8.65 2.82 1.20 0.00 0.00 0.00 1.47 4.40 18 E4a_E5a KnownJunction 0 3.41 0.00 1.71 4.99 3.74 2.90 0.00 2.05 6.19 1.56 0.00 5.85 8.12 2.59 4.45 8.03 4.77 4.93 0.00 0.00 0.00 3.12 8.19 19 E5_Aa NovelBoundary 0 18.08 11.64 3.67 3.90 20.88 2.50 20.27 5.05 9.61 6.21 0.00 0.00 0.00 0.00 0.00 0.00 4.77 2.57 4.80 14.96 2.97 0.00 0.00 20 ER5a ExonRegion 0 4.59 1.99 7.20 9.37 1.08 2.58 3.38 3.20 8.80 6.20 0.00 4.97 4.19 8.02 6.98 5.69 8.78 4.91 0.00 2.67 0.00 3.37 4.62 21 E5a_E6a KnownJunction 0 14.82 0.00 8.28 13.48 8.49 2.16 4.46 2.18 8.36 13.38 0.00 6.30 0.00 2.47 0.00 3.16 14.03 5.14 0.00 5.75 0.00 2.94 0.00 22 ER6a ExonRegion 0 7.78 0.30 12.15 9.02 4.56 9.44 5.49 6.00 9.84 13.26 0.51 2.80 2.35 11.70 5.63 10.23 15.92 8.42 0.00 5.63 2.07 5.45 8.29 23 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER7a ExonRegion 0 24.61 10.15 13.11 9.39 22.73 14.07 8.49 8.47 21.05 11.30 8.67 15.62 8.96 19.85 6.91 3.57 10.46 8.53 4.58 11.98 5.40 4.66 5.54 25 E7a_E8a KnownJunction 0 27.71 14.47 16.29 18.48 23.51 28.73 4.33 14.13 20.37 14.42 12.21 12.60 6.66 32.67 15.20 3.50 8.88 8.75 8.28 2.94 0.00 2.82 14.85 26 ER8a ExonRegion 0 26.13 15.46 23.02 22.07 16.83 12.88 9.95 12.69 20.24 14.44 5.13 16.14 22.32 20.41 11.97 13.97 9.98 17.36 4.25 18.54 7.12 4.66 6.87 27 E8a_E9a KnownJunction 0 57.94 35.13 35.95 47.51 42.28 15.73 8.44 21.40 11.92 15.82 12.42 18.61 19.80 26.25 0.00 4.10 3.83 4.60 0.00 24.48 8.53 5.51 12.12 28 ER9a ExonRegion 0 48.90 35.12 20.10 26.00 22.16 15.77 8.93 19.45 14.73 16.16 7.93 18.67 26.46 10.69 5.15 12.11 11.87 13.79 0.00 14.93 8.45 4.76 5.39 29 E9a_E10a KnownJunction 0 23.86 36.11 17.98 19.05 4.33 17.43 12.06 15.85 14.64 17.57 5.00 24.61 20.13 9.95 4.57 4.36 0.00 19.81 0.00 9.08 8.53 5.63 0.00 30 E10_Aa NovelBoundary 0 7.48 6.71 9.17 0.00 14.86 2.56 6.23 4.68 3.59 3.55 2.42 0.00 0.00 2.47 0.00 15.64 8.98 3.98 0.00 0.00 0.00 0.00 0.00 31 ER10a ExonRegion 0 37.92 35.05 26.83 24.37 22.69 18.03 11.01 16.73 16.79 17.78 11.29 20.13 9.98 20.09 11.70 13.31 14.47 17.48 1.66 14.51 7.50 4.61 3.28 32 E10_Ab KnownBoundary 0 61.49 9.08 34.36 31.96 15.11 12.61 12.23 23.78 22.51 17.49 14.79 18.91 6.82 24.13 0.00 24.27 28.42 11.81 0.00 19.81 11.80 10.96 8.28 33 ER10b ExonRegion 0 49.05 19.18 27.61 25.17 29.07 16.50 11.55 22.13 17.85 14.44 7.92 10.10 20.88 16.66 2.62 12.47 18.64 10.76 4.06 10.60 11.28 6.99 12.09 34 E10a_E11a KnownJunction 0 59.64 27.03 27.14 29.07 34.13 28.96 7.42 22.92 14.38 11.50 0.00 18.91 20.45 12.30 11.37 7.60 8.70 13.43 13.27 2.94 5.75 13.72 3.67 35 E11_Aa NovelBoundary 0 18.89 18.42 13.75 8.46 0.00 0.00 2.08 0.00 5.73 0.00 0.00 0.00 6.82 6.77 0.00 0.00 4.21 8.95 0.00 7.80 0.00 2.45 0.00 36 ER11a ExonRegion 0 33.50 17.37 28.14 17.91 22.14 13.51 13.94 9.65 16.16 8.37 8.08 16.10 11.64 18.24 14.71 11.91 24.36 11.37 9.44 11.19 9.61 8.53 3.04 37 E11_Da NovelBoundary 0 3.70 0.00 15.46 5.19 8.15 14.48 1.72 15.53 7.70 10.13 0.00 0.00 0.00 2.47 0.00 0.00 8.04 3.23 4.24 8.25 0.00 2.69 0.00 38 E11a_E12a KnownJunction 0 49.79 21.31 32.46 7.39 3.65 10.28 3.71 12.49 19.85 11.09 4.21 0.00 6.82 9.54 10.51 11.71 12.16 5.02 7.34 5.82 5.81 5.02 3.93 39 I11_AR1 ActiveIntronRegion 0 12.42 10.10 15.33 8.06 6.52 8.11 4.78 6.97 8.81 11.11 0.35 2.57 2.54 3.40 2.22 2.68 3.87 7.96 2.88 10.56 1.19 2.07 0.53 40 E12_Aa NovelBoundary 0 2.96 6.12 13.16 9.89 8.49 5.79 6.27 9.36 10.19 8.78 0.00 12.60 0.00 2.47 0.00 4.27 0.00 5.14 0.00 5.94 0.00 2.27 0.00 41 ER12a ExonRegion 0 48.17 17.28 38.08 28.23 35.22 25.12 19.54 16.64 23.74 17.14 9.44 11.40 14.64 21.81 21.92 14.69 19.08 21.18 6.88 18.01 10.48 11.69 4.50 42 E12_Da KnownBoundary 1 22.30 5.00 31.52 31.46 44.65 0.00 4.06 10.27 18.72 10.48 5.37 6.15 6.17 0.00 21.39 7.09 12.44 13.10 0.00 25.63 2.72 0.00 3.33 43 E12a_E13a KnownJunction 0 53.64 10.92 13.66 7.66 47.79 12.89 2.08 6.98 3.04 8.86 9.84 0.00 8.28 9.48 39.68 12.30 13.09 4.89 0.00 5.75 7.78 3.12 0.00 44 ER12b ExonRegion 0 21.70 16.06 19.32 16.41 14.90 7.94 9.51 11.51 13.36 7.96 2.31 5.58 1.89 5.60 10.83 5.08 9.76 12.70 5.51 13.96 6.15 2.88 3.47 45 E12_Db NovelBoundary 0 10.82 3.35 15.02 4.59 0.00 4.32 14.49 6.16 4.05 3.04 2.16 0.00 0.00 0.00 4.45 4.02 9.16 5.22 0.00 14.76 8.34 2.69 0.00 46 E12b_E13a NovelJunction 0 0.00 0.00 1.77 1.96 0.00 0.00 0.00 7.02 14.18 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.02 0.00 0.00 0.00 0.00 0.00 47 E13_Aa NovelBoundary 0 32.15 12.96 9.08 6.96 16.72 5.62 0.00 0.00 4.75 0.00 2.68 0.00 0.00 4.89 0.00 0.00 4.02 7.88 0.00 3.26 3.15 0.00 4.18 48 ER13a ExonRegion 0 50.74 18.40 43.40 30.45 32.42 14.24 13.74 16.02 22.57 20.76 7.26 9.19 15.57 14.10 27.55 12.90 15.83 9.20 4.73 20.34 4.59 12.60 3.74 49 ER13b ExonRegion 0 0.00 2.03 0.00 1.36 2.68 1.83 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00