Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EDA2R Gene 0 4.09 30.14 27.20 53.31 42.80 20.60 45.03 12.37 11.81 31.64 56.31 126.00 132.54 119.23 60.13 117.88 61.79 78.47 3.69 24.56 312.80 163.33 155.45 2 456230 Transcript 0 0.00 0.00 3.40 3.76 0.00 0.00 4.20 2.26 0.00 3.89 19.58 6.30 5.84 7.18 15.33 10.85 4.77 24.71 0.00 11.95 98.10 22.41 40.29 3 450752 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 451436 Transcript 0 0.00 0.00 5.38 2.93 0.00 0.00 0.00 0.00 2.37 6.31 20.74 0.00 0.00 8.48 0.00 3.59 4.77 2.32 0.00 0.00 108.60 8.76 11.35 5 448960 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 374719 Transcript 0 0.00 7.73 0.74 3.82 2.68 0.00 3.44 0.00 1.24 0.00 2.32 6.93 5.63 1.95 0.58 0.00 1.32 0.00 1.27 0.00 0.44 0.00 2.94 7 396050 Transcript 0 0.00 0.00 3.68 4.09 0.00 9.17 10.59 0.00 1.85 2.29 5.80 10.82 9.38 9.74 7.25 20.80 21.46 19.40 0.00 5.32 158.67 38.55 64.61 8 253392 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 IG31_AR2 ActiveIntergenicRegion 0 0.00 6.35 0.00 1.03 5.57 2.86 10.17 0.00 0.00 1.77 28.11 1.86 1.96 26.60 8.97 32.48 10.17 10.99 1.66 8.86 25.14 7.59 21.40 10 ER1a ExonRegion 0 0.00 0.00 3.39 4.61 0.00 10.22 12.62 0.00 1.81 1.07 4.28 9.40 10.08 17.55 8.21 29.78 24.79 23.75 0.00 4.71 199.04 45.26 82.66 11 E1a_E2b KnownJunction 0 0.00 2.76 15.61 20.34 0.00 25.50 28.88 0.00 7.52 9.37 7.32 25.21 39.12 18.72 13.35 48.45 48.15 115.99 0.00 5.31 351.76 102.69 175.42 12 ER2a ExonRegion 0 0.00 0.00 3.68 4.09 0.00 9.17 10.59 0.00 1.85 2.29 5.80 10.82 9.38 9.74 7.25 20.80 21.46 19.40 0.00 5.32 158.67 38.55 64.61 13 ER2b ExonRegion 0 0.00 0.41 7.60 8.45 1.61 18.34 21.32 0.00 4.57 6.31 11.60 24.68 22.04 15.43 11.90 39.23 42.91 38.43 0.00 8.94 299.26 74.38 120.11 14 ER2c ExonRegion 0 1.26 2.29 9.60 13.28 1.40 3.03 5.36 0.12 4.38 17.59 41.06 24.72 25.47 33.58 11.13 36.32 47.59 51.67 0.26 18.60 303.83 36.95 43.84 15 E2a_E3a KnownJunction 0 0.00 0.00 9.70 18.15 0.00 0.00 0.00 0.00 4.80 16.71 63.75 18.31 52.92 75.34 25.96 43.75 60.03 93.23 7.44 46.34 472.35 63.68 101.24 16 E2a_E5a KnownJunction 0 0.00 0.00 5.38 2.93 0.00 0.00 0.00 0.00 2.37 6.31 20.74 0.00 0.00 8.48 0.00 3.59 4.77 2.32 0.00 0.00 108.60 8.76 11.35 17 E3_Aa NovelBoundary 0 0.00 0.00 2.45 0.00 3.48 2.21 4.33 0.00 0.00 0.00 8.95 24.46 59.09 13.77 4.45 3.59 15.24 7.34 0.00 3.26 48.50 8.27 0.00 18 ER3a ExonRegion 0 0.60 3.06 12.79 19.48 10.25 14.90 13.27 6.17 5.71 18.52 45.78 28.64 35.42 87.02 35.29 93.25 60.26 126.34 4.41 23.67 313.00 113.29 154.94 19 E3a_E4a KnownJunction 0 0.00 13.22 12.83 16.78 30.31 15.96 34.01 9.45 4.34 14.08 34.90 6.30 6.01 70.16 49.45 78.36 36.00 79.80 0.00 12.02 182.68 51.44 63.94 20 E3a_E5a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 4.46 2.46 0.00 0.00 2.68 0.00 0.00 7.65 0.00 4.27 0.00 8.71 0.00 0.00 16.37 3.06 0.00 21 I3 Intron 0 0.40 1.15 0.69 1.91 1.26 0.35 4.12 0.97 0.87 2.42 7.47 13.49 22.37 20.16 2.17 8.97 14.31 14.55 0.30 3.21 48.20 19.25 24.36 22 I3_SR1 SilentIntronRegion 0 0.40 1.16 0.69 1.93 1.27 0.35 4.14 0.98 0.87 2.43 7.52 13.59 22.53 20.32 2.19 9.03 14.42 14.65 0.30 3.23 48.53 19.39 24.53 23 ER4a ExonRegion 0 1.26 15.20 10.87 18.51 17.05 10.02 20.23 5.37 4.48 21.15 54.30 36.30 76.35 89.70 32.05 88.16 61.60 100.32 5.67 29.17 354.93 120.14 110.84 24 E4a_E5a KnownJunction 1 0.00 8.35 10.61 23.71 7.98 2.33 15.02 1.52 6.48 23.10 59.75 38.26 45.45 120.43 23.49 53.92 37.87 96.67 0.00 31.51 306.54 88.91 88.52 25 I4 Intron 0 0.10 0.88 0.61 3.79 1.79 2.63 3.93 0.62 1.06 3.36 4.63 23.82 34.56 14.08 2.28 13.24 8.38 7.83 0.76 2.14 16.78 27.64 17.30 26 I4_SR1 SilentIntronRegion 0 0.00 0.66 0.79 2.20 1.45 1.59 2.01 0.84 0.20 2.60 3.78 21.58 27.40 11.77 1.91 9.35 10.03 2.30 0.00 0.92 13.63 22.83 13.70 27 I4_AR1 ActiveIntronRegion 0 0.25 1.40 0.65 6.33 2.79 3.41 5.32 0.31 2.03 3.35 5.07 27.54 40.15 15.13 2.01 13.76 6.26 9.66 0.76 2.96 13.36 35.42 19.08 28 I4_SR2 SilentIntronRegion 0 0.00 0.13 0.00 1.82 0.23 3.61 5.84 0.79 1.01 5.57 5.95 20.86 40.88 18.07 4.05 23.04 9.25 18.91 2.94 3.50 34.68 21.54 23.09 29 ER5a ExonRegion 0 0.60 9.87 12.30 27.09 5.17 4.49 14.31 4.27 9.98 26.83 53.47 34.52 40.12 101.60 25.72 69.64 40.50 99.48 1.51 31.48 398.78 99.05 103.58 30 E5_Da KnownBoundary 1 0.00 6.18 11.56 18.45 0.00 2.21 17.18 2.42 9.14 26.00 32.06 36.76 33.93 83.82 14.22 68.87 22.07 93.23 4.42 32.85 315.93 72.07 123.35 31 E5a_E7a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 2.84 0.00 0.00 1.22 0.00 1.95 0.00 0.00 7.00 0.00 3.76 4.77 12.35 0.00 2.81 41.64 0.00 11.95 32 E5a_E7b KnownJunction 0 3.48 2.83 7.86 13.02 0.00 2.90 3.89 3.86 3.27 5.05 7.63 0.00 13.15 21.84 15.95 15.38 4.77 34.86 0.00 2.88 83.09 26.09 23.82 33 E5a_E8a NovelJunction 0 0.00 0.00 0.00 1.33 0.00 0.00 0.00 1.52 1.16 1.26 0.00 5.40 5.84 9.54 4.82 4.36 0.00 2.32 0.00 0.00 23.17 4.59 4.35 34 ER5b ExonRegion 0 0.00 4.85 7.27 19.13 6.65 10.38 14.56 3.97 7.72 18.15 34.73 18.13 28.04 85.97 21.52 72.02 21.40 72.08 0.56 22.26 286.94 84.46 95.68 35 E5_Db NovelBoundary 0 0.00 0.00 3.67 3.23 4.33 0.00 5.83 0.00 3.04 2.87 18.79 5.85 32.79 33.67 0.00 43.49 18.23 7.92 0.00 2.36 97.55 21.92 60.95 36 E5b_E6a KnownJunction 0 0.00 0.00 1.66 4.10 4.33 0.00 0.00 0.00 1.79 0.00 2.37 0.00 0.00 6.89 0.00 4.02 0.00 0.00 0.00 0.00 2.35 0.00 12.38 37 E5b_E7a KnownJunction 0 0.00 0.00 3.40 3.76 0.00 0.00 4.20 2.26 0.00 3.89 19.58 6.30 5.84 7.18 15.33 10.85 4.77 24.71 0.00 11.95 98.10 22.41 40.29 38 E5b_E7b KnownJunction 0 0.00 6.31 3.22 12.45 0.00 0.00 2.21 4.64 1.79 8.60 2.26 0.00 6.66 16.42 0.00 12.05 0.00 38.59 0.00 22.63 96.06 26.15 35.85 39 E5b_E8a NovelJunction 0 0.00 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 1.64 0.00 0.00 6.01 0.00 5.07 4.19 0.00 1.78 0.00 0.00 21.56 3.12 8.02 40 I5 Intron 1 0.54 2.52 2.15 5.10 5.78 3.14 10.59 2.29 1.93 3.15 18.05 53.06 66.97 49.46 6.06 41.06 29.98 18.29 1.22 7.16 73.87 38.78 61.74 41 I5_SR1 SilentIntronRegion 1 0.57 2.46 2.21 5.19 5.48 3.14 10.94 2.42 1.98 3.33 18.44 53.33 68.03 50.00 6.17 41.74 30.83 18.89 1.29 7.29 76.60 39.00 63.04 42 I5_AR1 ActiveIntronRegion 1 0.00 3.62 1.08 3.61 11.11 3.26 4.71 0.00 1.09 0.00 11.46 49.54 49.68 40.96 4.15 29.96 15.62 8.19 0.00 5.05 27.34 35.83 40.05 43 E6_Aa NovelBoundary 0 3.11 2.57 5.14 27.90 35.06 18.80 32.02 4.27 3.18 18.08 45.75 102.93 74.02 87.35 30.29 64.51 52.83 39.96 0.00 17.77 114.72 91.24 73.58 44 ER6a ExonRegion 0 0.00 0.00 1.27 2.10 6.15 0.00 0.07 0.00 0.85 0.00 7.56 38.43 42.46 35.59 10.49 15.17 6.08 0.13 0.00 3.81 44.46 18.28 11.70 45 E6_Da NovelBoundary 0 0.00 0.00 0.00 18.21 4.33 14.14 16.21 9.04 7.47 8.19 42.33 60.47 116.88 46.80 13.35 48.62 46.66 50.20 0.00 8.25 118.18 62.15 82.72 46 E6a_E7a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 4.19 0.00 0.00 0.00 0.00 2.78 3.12 4.18 47 E6a_E7b NovelJunction 0 0.00 0.00 0.00 2.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.00 0.00 11.12 0.00 0.00 0.00 0.00 0.00 0.00 2.41 2.69 7.77 48 I6 Intron 1 1.88 4.82 3.79 11.43 8.73 3.26 9.81 2.29 1.64 6.59 18.34 48.78 58.33 59.12 8.65 51.99 19.58 35.14 0.00 6.31 117.62 50.66 71.40 49 I6_AR1 ActiveIntronRegion 1 1.90 4.88 3.83 11.55 8.83 3.30 9.92 2.32 1.66 6.67 18.56 49.36 59.01 59.81 8.75 52.59 19.81 35.55 0.00 6.38 118.99 51.25 72.22 50 E7_Aa NovelBoundary 0 0.00 0.00 1.45 5.03 3.74 4.54 12.54 5.30 0.00 1.26 10.90 6.30 19.48 21.13 10.63 45.03 11.78 35.86 0.00 2.62 71.54 24.49 18.27 51 E7_Ab NovelBoundary 0 0.00 0.00 1.12 13.75 0.00 2.90 5.17 2.18 1.79 17.89 7.79 12.30 19.48 36.38 4.45 46.06 17.02 33.78 0.00 10.74 110.52 40.84 45.67 52 ER7a ExonRegion 0 0.30 1.16 4.03 9.73 0.00 1.05 5.86 2.72 0.71 7.70 15.19 15.46 34.17 42.23 20.72 28.02 12.73 39.07 0.00 16.11 169.06 33.34 64.61 53 ER7b ExonRegion 0 1.31 8.16 15.13 21.09 13.53 10.23 15.51 4.58 10.27 21.69 40.67 62.50 78.16 110.61 34.36 106.73 52.78 87.82 1.30 23.02 403.11 105.58 147.46 54 E7_Da NovelBoundary 0 0.00 2.83 9.67 7.16 10.61 7.21 8.97 5.30 4.25 18.13 15.53 35.41 58.44 53.86 15.20 66.31 49.37 67.20 0.00 12.98 250.45 70.23 71.45 55 E7b_E8a KnownJunction 0 0.00 5.53 8.84 21.81 3.14 2.33 19.65 10.06 6.28 36.02 21.74 96.93 59.57 110.78 27.81 119.54 40.30 102.35 0.00 17.64 396.98 107.71 97.91 56 ER7c ExonRegion 0 0.00 4.07 11.89 16.90 11.24 5.13 16.02 12.27 6.05 35.90 25.13 90.49 81.61 108.65 25.24 112.94 57.11 95.71 0.00 18.30 407.47 125.22 115.12 57 ER8a ExonRegion 0 5.46 40.20 33.82 68.13 56.70 25.32 58.30 15.89 13.77 37.20 63.67 161.80 166.10 133.62 73.83 133.44 68.32 76.59 4.44 25.82 305.40 193.62 171.67 58 ER8b ExonRegion 0 0.00 7.73 0.74 3.82 2.68 0.00 3.44 0.00 1.24 0.00 2.32 6.93 5.63 1.95 0.58 0.00 1.32 0.00 1.27 0.00 0.44 0.00 2.94 59 IG30_AR1 ActiveIntergenicRegion 0 2.04 21.53 20.21 65.87 32.70 14.12 19.24 4.96 4.43 17.60 9.12 54.15 20.88 17.83 16.32 10.01 5.40 7.00 2.45 9.83 29.26 58.74 24.03