Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZC4H2 Gene 0 16.13 75.12 117.77 44.99 38.56 25.30 21.46 45.76 38.22 23.18 33.02 13.27 6.06 12.98 0.31 6.82 4.33 81.03 39.30 58.28 16.98 19.97 16.19 2 337990 Transcript 0 2.05 6.47 4.02 0.61 0.68 0.65 0.00 1.97 2.97 0.00 3.90 0.00 0.00 1.24 0.00 1.29 0.73 5.64 3.17 3.33 4.74 3.07 3.12 3 488831 Transcript 0 2.82 15.98 14.96 0.00 10.53 0.00 0.00 9.65 6.13 0.00 4.32 0.00 0.00 0.00 0.00 0.00 0.00 4.60 0.00 5.43 8.22 0.00 7.77 4 488608 Transcript 0 3.25 9.21 12.50 8.45 4.64 2.10 4.06 6.42 4.07 2.28 1.79 0.88 0.76 0.80 0.00 0.55 0.79 9.23 3.06 7.49 1.14 1.91 1.58 5 447788 Transcript 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 374839 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 0.00 0.00 0.00 0.00 7 492653 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 8 476032 Transcript 0 0.00 2.83 1.45 8.72 0.00 0.00 0.00 6.90 3.59 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.32 8.56 2.43 0.00 0.00 0.00 9 442817 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.00 10 488406 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1a ExonRegion 0 4.09 6.24 6.21 1.21 1.37 1.30 0.00 1.73 4.14 0.00 5.11 0.00 0.00 0.00 0.00 2.58 1.47 8.70 2.76 3.97 6.95 3.75 2.74 12 E1_Ab KnownBoundary 0 0.00 17.23 47.93 3.60 4.33 2.90 0.00 13.84 10.13 1.16 7.00 0.00 0.00 0.00 0.00 3.76 4.68 18.24 4.52 8.69 11.55 5.39 3.67 13 ER1b ExonRegion 0 1.64 9.10 15.56 1.26 2.81 0.87 0.20 5.19 9.26 0.11 8.75 3.57 0.00 1.30 0.00 0.89 2.56 14.14 4.54 8.14 9.81 3.33 8.15 14 E1a_E4a KnownJunction 0 0.00 6.71 1.83 0.00 0.00 0.00 0.00 2.22 1.79 0.00 2.68 0.00 0.00 2.47 0.00 0.00 0.00 2.57 3.58 2.68 2.53 2.39 3.50 15 E1a_E4c KnownJunction 0 2.82 15.98 14.96 0.00 10.53 0.00 0.00 9.65 6.13 0.00 4.32 0.00 0.00 0.00 0.00 0.00 0.00 4.60 0.00 5.43 8.22 0.00 7.77 16 ER2a ExonRegion 0 2.84 3.01 1.91 1.50 0.05 0.18 2.73 0.00 0.10 0.00 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 2.21 0.00 17 E2_Ab KnownBoundary 0 0.00 2.63 1.83 1.93 0.00 0.00 0.00 2.14 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.82 0.00 18 E2_Ac KnownBoundary 0 19.48 39.40 4.61 2.80 3.57 2.50 1.94 0.00 1.27 0.00 7.00 0.00 0.00 0.00 0.00 0.00 0.00 10.65 3.58 16.75 0.00 3.12 0.00 19 ER2b ExonRegion 0 13.08 29.58 3.79 3.72 2.92 3.00 1.56 0.00 1.91 0.21 5.97 0.00 0.00 0.00 0.00 0.00 0.00 1.34 0.00 12.57 0.00 4.17 0.27 20 ER2c ExonRegion 1 47.66 241.87 82.46 47.33 105.33 51.88 89.52 30.83 38.66 20.27 33.84 1.22 1.58 13.39 0.00 19.48 3.06 90.51 95.71 123.38 16.39 18.69 10.44 21 E2_Ad KnownBoundary 0 27.04 78.14 112.18 62.13 18.17 18.11 35.24 45.96 48.84 17.00 29.27 6.30 14.45 9.12 0.00 11.96 0.00 95.47 42.35 44.81 11.24 12.98 10.84 22 ER2d ExonRegion 1 10.47 37.73 87.87 34.29 24.29 21.81 18.15 33.80 41.73 15.18 56.41 1.25 6.91 4.23 0.00 4.15 0.00 64.04 59.01 44.90 15.43 10.64 5.02 23 E2a_E4a KnownJunction 0 0.00 2.83 1.45 8.72 0.00 0.00 0.00 6.90 3.59 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.32 8.56 2.43 0.00 0.00 0.00 24 E2a_E4c KnownJunction 1 13.11 26.90 82.46 13.35 25.98 16.81 14.04 16.10 40.10 13.62 85.50 0.00 0.00 0.00 0.00 3.42 0.00 36.02 54.59 52.03 24.22 8.27 0.00 25 I2_AR4 ActiveIntronRegion 0 4.14 18.17 8.64 11.66 8.98 5.89 7.72 7.78 7.02 5.67 4.00 2.95 1.49 4.24 0.00 1.49 0.09 15.63 5.94 17.09 3.93 1.48 6.48 26 I2_SR4 SilentIntronRegion 0 5.06 16.16 7.13 10.59 12.39 5.30 9.14 12.84 9.36 6.66 4.70 4.08 1.18 2.61 0.00 0.81 0.45 13.92 4.52 19.10 3.36 2.86 4.51 27 E3_Aa NovelBoundary 0 0.00 20.98 12.80 10.12 31.24 7.78 21.20 16.14 15.68 8.06 7.74 0.00 0.00 2.47 0.00 0.00 0.00 13.85 4.52 27.93 6.24 8.45 3.67 28 E3_Da NovelBoundary 0 3.48 18.94 18.42 10.42 12.31 0.00 19.83 17.99 15.08 13.11 4.90 6.30 0.00 2.41 0.00 0.00 0.00 2.24 8.47 18.92 0.00 11.33 8.71 29 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.00 30 I3 Intron 0 9.46 25.57 17.35 16.46 25.80 4.87 12.02 32.75 19.03 14.81 4.05 4.70 2.51 1.98 0.00 1.25 1.38 7.72 4.90 13.97 2.46 5.53 4.92 31 I3_SR1 SilentIntronRegion 0 9.49 25.64 17.40 16.50 25.87 4.88 12.06 32.84 19.08 14.85 4.06 4.71 2.51 1.98 0.00 1.25 1.39 7.74 4.91 14.01 2.46 5.55 4.94 32 ER4a ExonRegion 0 13.44 39.94 36.99 16.32 14.73 13.06 11.24 19.79 18.46 11.42 8.03 6.26 5.54 5.29 5.70 5.29 2.03 38.27 14.28 17.00 6.22 8.64 8.07 33 E4_Ab KnownBoundary 0 2.89 32.23 19.22 18.05 3.48 12.78 0.00 7.31 9.06 6.21 6.95 0.00 0.00 4.94 0.00 13.07 0.00 15.21 14.40 21.03 2.97 3.12 0.00 34 E4_Ac KnownBoundary 0 16.97 71.63 25.87 9.92 15.20 0.00 8.88 8.71 10.30 6.15 17.21 0.00 0.00 2.35 0.00 3.33 0.00 15.79 13.08 13.49 0.00 6.18 4.18 35 ER4b ExonRegion 1 13.91 82.51 66.70 26.09 21.79 9.69 8.32 20.99 26.11 16.22 33.69 1.24 0.00 8.35 0.00 12.31 0.00 41.18 26.39 43.46 11.96 8.93 4.61 36 ER4c ExonRegion 0 20.57 90.77 207.86 85.20 76.27 44.72 35.70 91.30 84.85 47.24 79.69 32.58 8.56 24.85 0.00 21.15 4.46 197.01 116.89 165.50 41.68 41.07 24.06 37 E4a_E5a KnownJunction 0 21.93 189.51 234.00 112.81 174.96 115.10 141.63 109.26 93.20 53.03 73.28 82.38 6.49 42.79 0.00 23.84 8.32 238.98 112.94 144.52 47.75 49.97 36.79 38 ER5a ExonRegion 0 33.53 249.15 211.18 80.40 81.62 52.04 66.21 130.04 106.86 65.51 115.62 68.01 19.54 33.43 0.00 14.81 13.57 243.79 105.49 143.88 51.50 61.29 37.58 39 E5_Ab KnownBoundary 0 55.34 284.88 178.88 53.74 23.77 21.98 35.90 93.24 89.50 64.68 84.39 43.06 25.49 28.84 0.00 4.10 12.62 231.43 96.85 136.02 37.81 84.20 19.04 40 ER5b ExonRegion 0 42.51 207.25 217.96 85.57 44.38 26.23 30.85 112.69 107.27 61.43 91.81 48.47 22.63 38.63 0.00 14.21 16.29 242.94 86.00 132.19 40.82 65.18 23.68 41 E5_Da KnownBoundary 0 10.52 41.51 25.37 16.22 0.00 0.00 3.67 13.43 11.81 8.81 5.37 6.30 0.00 0.00 0.00 0.00 4.49 39.51 7.62 22.95 5.56 0.00 0.00 42 E5a_E5c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 43 E5a_E5d KnownJunction 0 51.71 216.08 275.60 107.78 97.37 39.35 35.64 144.50 130.41 60.01 93.34 87.03 27.27 49.56 0.00 24.78 11.59 214.85 66.64 140.17 54.73 60.25 37.65 44 E5a_E5f KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER5c ExonRegion 0 3.90 12.31 16.22 10.97 6.28 2.51 5.63 10.44 7.80 4.45 3.84 1.05 1.40 1.83 0.00 1.61 1.33 19.59 6.03 11.93 2.11 1.98 3.01 46 E5_Ac KnownBoundary 0 0.00 0.00 7.10 9.32 16.55 9.43 0.00 9.28 4.54 3.33 2.42 0.00 0.00 2.12 0.00 0.00 0.00 20.06 0.00 8.69 6.30 2.63 10.93 47 E5_Ad KnownBoundary 0 0.00 6.25 24.51 15.68 4.33 7.15 1.81 7.52 8.42 10.45 5.00 0.00 0.00 0.00 0.00 0.00 0.00 21.56 9.51 3.07 3.15 0.00 0.00 48 ER5d ExonRegion 0 1.85 9.60 26.88 18.91 12.38 9.86 1.61 15.07 11.54 10.47 7.37 1.76 0.73 1.73 0.00 0.74 0.41 29.79 8.16 10.17 6.68 2.80 6.33 49 E5b_E5e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER5e ExonRegion 0 49.64 239.96 240.95 98.38 71.52 54.35 37.91 129.32 121.38 64.23 108.24 67.30 23.45 46.80 0.00 22.97 9.60 231.47 112.07 152.61 57.10 74.44 74.48 51 ER5f ExonRegion 0 26.05 138.21 168.05 56.05 52.84 43.43 34.21 80.07 86.89 50.44 77.70 56.35 15.15 34.77 0.00 9.44 8.79 169.00 71.03 98.30 46.74 49.57 40.68 52 E5_Dc KnownBoundary 0 0.00 6.58 9.31 12.39 0.00 0.00 4.11 4.23 4.66 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.80 4.24 3.26 0.00 3.00 3.76 53 E5c_E5f KnownJunction 0 23.71 134.19 219.48 91.10 56.20 24.70 23.27 120.31 98.38 54.66 57.91 37.66 32.47 29.73 0.00 16.49 8.60 252.29 139.77 135.76 50.66 56.27 82.12 54 ER5g ExonRegion 0 19.85 122.21 192.79 75.48 45.87 21.74 28.87 102.14 89.75 51.17 63.60 29.28 37.74 37.59 0.00 14.15 13.05 235.37 113.31 130.50 54.57 58.14 67.12 55 ER5h ExonRegion 0 3.02 12.30 19.37 12.87 7.58 3.62 3.83 8.83 4.30 2.38 1.15 1.58 0.89 0.56 0.00 0.02 1.03 8.10 3.14 9.51 1.32 1.53 1.72 56 E5_Af KnownBoundary 0 14.52 36.18 40.92 15.68 7.64 0.00 3.93 4.23 5.27 1.58 2.68 6.45 6.82 0.00 0.00 0.00 0.00 17.66 13.84 19.18 0.00 3.12 0.00 57 ER5i ExonRegion 0 31.30 160.92 304.92 112.72 35.14 35.28 36.30 158.24 104.27 68.30 91.56 28.94 24.31 35.22 0.00 28.16 4.78 289.80 149.88 167.75 57.70 67.93 60.82 58 E5_Dd KnownBoundary 0 39.19 164.64 239.55 96.26 11.97 32.25 43.28 146.96 69.30 59.96 92.44 24.91 15.10 31.31 0.00 33.24 0.00 245.11 103.91 169.96 46.89 57.01 51.39 59 E5_De KnownBoundary 0 7.41 94.13 213.06 74.42 48.05 23.96 30.60 64.16 67.88 28.26 46.96 12.30 6.82 43.20 0.00 20.42 4.77 108.11 78.68 122.21 42.63 20.27 36.36 60 ER5j ExonRegion 0 21.52 139.75 305.87 117.06 28.10 32.80 37.88 146.25 98.95 62.32 78.71 19.96 10.42 42.77 0.00 33.19 3.30 221.52 91.84 171.99 55.34 49.19 40.62 61 ER5k ExonRegion 0 20.85 110.49 309.34 125.32 59.31 56.08 38.02 113.07 107.21 54.10 64.27 16.16 17.35 36.14 0.00 12.58 15.02 132.95 62.01 141.63 49.44 35.07 35.44 62 E5_Df KnownBoundary 0 56.38 187.73 310.07 138.81 135.57 92.11 63.55 123.22 120.25 60.55 100.13 29.26 13.64 30.08 0.00 19.99 12.06 211.83 91.01 173.09 71.48 51.93 40.63 63 ER5l ExonRegion 0 36.48 175.91 283.63 100.66 86.78 61.98 44.70 108.36 97.76 60.86 84.96 30.80 16.79 38.58 0.00 16.77 10.59 237.31 104.56 131.71 43.76 47.57 42.32 64 E5_Dg KnownBoundary 0 59.20 258.90 261.82 102.38 100.59 77.46 60.72 88.06 69.65 56.46 78.76 12.60 12.99 49.39 0.00 18.37 12.25 205.36 138.17 110.38 49.30 42.37 55.57 65 ER5m ExonRegion 0 29.43 129.61 258.78 88.16 80.61 53.33 36.36 80.02 60.92 39.56 57.43 18.94 8.18 21.37 0.00 10.44 7.35 115.92 59.30 96.18 26.30 36.07 30.16 66 E5_Dh KnownBoundary 0 6.30 74.20 80.63 30.97 28.61 22.43 7.64 27.81 21.27 12.25 17.16 0.00 0.00 0.00 0.00 0.00 4.58 6.01 30.97 39.44 5.37 15.49 3.84 67 ER5n ExonRegion 0 5.00 27.19 43.38 12.21 14.35 7.69 6.02 12.71 12.29 8.71 5.57 2.16 0.00 2.01 0.00 0.12 0.71 6.10 9.03 21.15 1.40 8.35 0.69 68 ER5o ExonRegion 0 5.29 2.54 3.37 2.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 3.19 0.53 0.00 0.52 0.00 69 ER5p ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 0.00 0.00 0.00 0.00