Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIF4A Gene 0 19.33 56.05 88.65 32.59 56.65 24.84 121.22 51.85 16.27 90.38 168.76 85.03 40.11 159.68 70.88 116.67 124.39 142.05 48.49 105.88 6.28 16.14 8.18 2 374388 Transcript 0 9.50 7.57 4.46 1.85 10.50 6.01 13.11 4.36 2.81 3.59 7.60 13.29 14.80 10.98 19.19 15.92 12.08 4.94 8.40 13.04 5.84 2.48 7.35 3 374403 Transcript 1 32.36 64.22 148.25 45.18 64.04 28.62 151.40 68.42 21.61 120.43 197.31 69.70 26.78 161.47 135.85 128.97 112.72 209.54 70.61 112.86 6.00 16.78 11.77 4 485406 Transcript 0 0.21 0.28 0.25 0.00 0.53 0.21 0.50 0.00 0.50 0.47 4.99 0.00 0.00 2.63 1.25 3.95 3.94 5.15 0.00 1.67 0.00 0.00 0.40 5 ER1a ExonRegion 0 0.05 0.18 1.23 1.54 0.81 0.64 1.61 0.86 1.88 2.69 3.61 0.00 0.00 5.19 0.19 0.78 2.22 2.45 0.00 3.75 0.05 0.00 0.00 6 E1_Ab KnownBoundary 0 0.00 0.00 1.83 3.56 0.00 0.00 0.00 2.14 1.62 3.14 5.21 0.00 0.00 4.47 0.00 0.00 0.00 0.00 0.00 6.26 0.00 0.00 0.00 7 E1_Ac KnownBoundary 1 10.52 27.30 2.84 7.49 32.09 16.98 99.98 7.93 6.57 24.36 136.72 0.00 0.00 28.55 17.68 91.69 54.89 111.76 39.34 125.53 3.15 5.27 11.35 8 ER1b ExonRegion 1 3.27 14.79 4.51 6.94 13.74 12.17 51.03 6.76 4.88 17.41 82.15 0.59 1.49 24.29 7.65 49.18 44.11 81.13 20.70 70.70 2.20 3.79 5.07 9 ER1c ExonRegion 1 8.47 43.03 19.25 15.21 35.14 21.04 119.09 23.52 11.28 43.34 189.12 12.08 19.99 82.49 19.70 176.45 161.66 251.63 80.81 171.56 7.02 16.67 20.25 10 E1_Da KnownBoundary 0 3.41 0.00 1.80 0.00 4.16 2.27 6.05 0.00 0.00 1.48 5.11 0.00 0.00 9.54 0.00 19.14 7.57 11.73 0.00 6.26 0.00 0.00 0.00 11 E1a_E2a KnownJunction 1 12.97 63.15 33.50 22.41 38.29 18.80 133.06 35.00 15.28 69.09 166.25 18.31 33.28 122.79 8.90 198.24 211.22 378.68 86.78 181.46 8.90 20.51 7.68 12 ER1d ExonRegion 0 0.41 0.56 0.50 0.00 1.06 0.42 1.00 0.00 1.00 0.94 5.09 0.00 0.00 5.26 2.49 4.66 3.59 6.11 0.00 3.35 0.00 0.00 0.81 13 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.90 0.00 0.00 0.00 0.00 3.25 4.30 4.19 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 1 0.48 14.96 17.45 10.56 5.26 2.85 20.66 17.44 6.72 44.79 115.03 11.94 8.71 44.86 11.56 52.74 101.77 117.90 25.80 82.65 3.70 4.96 3.31 15 E2a_E3a KnownJunction 1 0.00 24.40 28.77 16.88 0.00 2.38 29.85 37.13 10.19 60.63 173.57 24.76 6.82 108.19 37.83 93.14 146.61 193.42 79.72 207.41 5.31 17.76 0.00 16 ER3a ExonRegion 1 2.78 36.59 25.38 16.59 20.41 14.13 47.65 28.59 9.66 54.43 125.34 33.69 17.25 137.65 22.25 142.71 80.08 220.75 58.08 128.57 2.47 14.17 7.10 17 E3a_E4a KnownJunction 0 2.96 62.29 25.72 8.69 53.31 10.39 147.64 30.85 9.78 55.26 146.35 37.81 14.12 113.78 24.23 78.61 100.61 70.26 49.51 99.33 0.00 2.82 4.35 18 ER4a ExonRegion 0 7.41 44.52 29.48 10.86 20.62 9.17 106.87 28.80 13.88 71.72 131.52 75.03 21.71 114.05 22.95 67.74 79.10 61.11 26.42 87.69 1.77 13.60 0.78 19 E4a_E5a KnownJunction 1 6.67 30.85 31.16 10.42 45.67 17.94 105.20 39.10 17.30 76.34 179.99 131.89 5.68 154.51 19.66 123.81 111.73 73.70 39.44 124.96 0.00 11.88 4.35 20 ER5a ExonRegion 1 2.75 41.62 31.21 15.05 31.13 18.13 107.26 33.01 13.35 77.99 182.87 116.80 37.99 141.48 25.95 95.67 107.13 101.15 34.26 112.98 4.24 14.96 3.23 21 E5a_E6a KnownJunction 0 3.63 69.66 49.79 18.45 36.25 7.44 143.57 42.84 16.64 81.15 173.94 197.31 57.14 153.10 40.05 108.01 157.36 110.47 34.45 127.45 8.46 37.29 4.35 22 ER6a ExonRegion 1 8.38 64.47 42.96 21.47 32.33 14.87 113.76 39.15 13.38 81.92 189.10 122.52 51.28 183.96 31.06 123.44 145.63 147.89 47.70 128.58 7.53 15.18 5.79 23 E6a_E7a KnownJunction 1 3.56 43.41 70.16 24.24 36.59 20.27 209.82 52.62 16.09 83.62 169.46 123.04 33.76 176.76 34.37 130.91 152.97 154.75 68.24 144.84 7.72 25.84 11.87 24 ER7a ExonRegion 0 5.48 36.35 57.57 27.27 23.10 13.78 136.79 49.45 15.26 96.32 149.55 116.35 74.74 190.50 40.83 143.10 155.56 137.78 50.87 120.54 8.49 16.58 14.13 25 E7a_E8a KnownJunction 0 14.52 22.04 55.08 33.13 47.96 7.27 130.90 46.78 17.10 102.59 149.51 122.59 63.31 215.55 45.99 168.59 212.90 128.92 57.70 166.25 8.46 15.49 16.56 26 ER8a ExonRegion 0 6.04 43.57 69.03 34.54 31.01 18.79 104.15 39.03 11.95 86.06 174.18 115.67 62.05 179.79 45.43 121.45 155.40 125.74 49.33 137.24 3.48 15.35 16.36 27 E8a_E9a KnownJunction 0 3.56 46.37 60.58 43.52 47.96 11.75 94.42 34.17 15.57 86.58 153.20 144.20 95.61 138.50 38.45 126.12 142.12 82.33 53.46 128.98 3.15 24.74 11.69 28 ER9a ExonRegion 0 10.43 51.99 62.79 36.89 33.40 31.84 139.06 45.84 15.19 108.18 198.52 133.35 70.40 173.21 49.16 131.79 159.94 112.21 44.05 132.82 2.67 17.57 11.31 29 E9a_E10a KnownJunction 0 16.89 65.19 86.81 35.59 31.49 18.17 103.96 51.88 20.49 139.31 192.05 141.50 70.13 167.76 39.80 182.00 204.67 156.98 44.14 152.83 5.62 2.76 16.39 30 ER10a ExonRegion 0 7.82 43.46 61.19 29.52 34.66 14.08 93.92 46.61 13.03 103.41 170.66 177.23 89.94 216.45 47.82 127.37 163.07 148.06 56.05 108.17 5.83 17.21 11.56 31 E10a_E11a KnownJunction 0 13.56 41.57 47.63 23.27 41.85 19.14 111.86 47.77 10.56 89.13 169.83 171.06 85.55 200.90 45.24 149.96 137.17 130.16 41.60 107.32 11.00 17.70 4.10 32 ER11a ExonRegion 0 15.42 67.66 56.21 23.46 46.27 24.97 126.82 49.84 13.52 91.90 173.92 114.52 75.68 189.45 42.04 148.56 168.67 138.60 29.89 103.63 8.58 17.83 6.45 33 E11a_E12a KnownJunction 1 27.04 114.85 65.20 14.85 51.95 56.56 167.99 62.76 12.85 90.15 123.29 94.53 69.64 243.98 38.20 143.12 187.56 139.32 38.21 128.41 16.31 22.90 7.85 34 ER12a ExonRegion 0 12.59 67.45 65.71 22.85 16.19 37.30 114.87 50.15 17.31 85.22 146.34 116.82 89.91 209.92 54.88 141.60 146.86 146.88 52.91 102.88 6.09 19.00 15.18 35 E12a_E13a KnownJunction 1 10.45 66.50 74.21 36.66 15.96 45.14 166.76 44.44 24.57 93.78 206.68 169.56 102.27 150.04 27.44 174.83 170.83 177.13 99.86 107.32 2.41 14.39 23.73 36 ER13a ExonRegion 0 11.68 48.69 58.03 37.56 39.81 40.05 137.60 54.30 15.94 104.58 232.91 100.03 64.73 195.54 40.95 157.94 170.56 178.17 61.24 122.52 7.71 21.68 9.39 37 E13a_E14a KnownJunction 0 28.00 66.44 81.22 24.11 39.90 26.69 120.74 68.06 20.78 97.64 236.17 144.50 77.27 215.14 66.14 157.31 143.43 167.47 90.73 114.86 11.55 10.41 15.62 38 ER14a ExonRegion 0 20.46 62.97 65.05 33.86 42.81 16.47 130.35 58.49 9.92 89.32 210.14 94.87 72.74 207.43 58.38 130.20 102.27 191.74 81.42 128.37 8.00 12.25 9.79 39 E14a_E15a KnownJunction 0 21.78 75.32 55.50 37.29 55.18 20.73 147.86 43.74 6.60 86.33 190.05 79.53 33.76 180.94 60.45 141.42 107.43 163.62 62.21 125.02 13.96 22.29 8.45 40 ER15a ExonRegion 0 14.22 60.11 74.76 33.19 32.04 24.65 111.47 57.35 17.24 84.90 200.92 87.94 64.25 194.94 53.89 149.96 148.82 197.75 59.67 116.80 13.14 16.51 10.23 41 E15a_E16a KnownJunction 0 6.96 45.85 56.47 30.20 44.91 37.88 135.14 65.51 21.35 79.89 153.14 74.72 53.08 165.17 43.02 104.42 154.09 185.92 58.64 134.10 8.77 13.66 12.80 42 ER16a ExonRegion 0 19.05 39.42 78.87 31.14 57.04 41.03 175.28 67.38 20.97 102.13 202.17 145.29 73.96 224.16 61.54 126.20 161.55 170.93 60.31 136.93 6.19 12.88 11.38 43 E16a_E17a KnownJunction 0 20.89 38.81 82.52 40.35 66.81 45.83 116.59 46.21 20.60 105.38 134.03 191.76 67.04 204.96 101.00 174.06 190.00 180.11 40.57 123.42 0.00 11.51 15.19 44 ER17a ExonRegion 0 13.27 49.56 91.18 37.16 38.79 24.40 122.51 66.11 17.12 100.86 186.62 150.87 70.42 202.79 55.72 126.26 156.96 125.70 56.00 113.91 5.38 12.20 7.59 45 E17a_E18a KnownJunction 0 28.82 82.75 118.36 24.71 75.55 13.51 141.76 86.95 25.75 116.02 188.26 189.36 56.81 295.07 123.37 105.53 165.12 103.18 56.10 137.10 0.00 16.90 15.37 46 ER18a ExonRegion 0 17.31 53.88 116.50 40.58 73.11 46.06 178.88 59.28 15.59 119.33 180.04 145.76 65.91 219.12 72.84 132.43 146.22 133.05 60.92 136.63 5.86 13.16 12.41 47 E18a_E19a KnownJunction 0 27.41 46.31 123.44 48.68 80.31 55.54 246.21 66.58 22.71 115.80 209.79 176.16 69.96 254.52 74.54 173.72 222.91 136.42 67.30 144.58 2.84 27.00 12.29 48 ER19a ExonRegion 0 21.59 47.11 100.22 36.70 63.96 27.35 146.75 57.86 20.63 125.35 197.52 128.29 69.12 194.49 78.85 146.16 147.09 152.90 52.18 127.79 4.51 26.34 8.04 49 E19a_E20a KnownJunction 0 21.56 37.56 121.11 35.46 81.41 32.71 109.83 59.15 13.95 116.39 167.78 129.19 53.41 140.27 100.25 117.83 119.21 128.71 42.26 139.28 6.24 11.70 4.35 50 ER20a ExonRegion 0 19.88 54.89 93.84 28.02 53.02 29.29 121.50 50.06 15.06 100.95 172.76 102.43 42.75 193.13 54.39 90.34 170.11 120.72 48.23 128.57 7.04 9.76 8.06 51 E20a_E21a KnownJunction 0 10.82 57.16 91.60 47.35 88.29 38.22 165.61 42.84 17.71 120.85 184.63 85.38 61.03 161.40 47.10 107.24 115.01 193.05 39.34 123.68 2.90 17.33 10.93 52 ER21a ExonRegion 0 18.55 56.60 102.66 38.46 69.47 32.13 139.46 63.68 14.09 97.81 199.13 100.05 35.87 226.64 73.22 154.63 145.01 201.54 46.02 116.56 8.60 20.17 8.64 53 E21a_E22a KnownJunction 0 17.56 85.91 136.93 44.22 99.75 59.34 154.83 55.70 20.34 111.99 228.22 69.02 40.09 212.90 84.31 145.00 152.41 173.77 48.94 101.82 14.33 19.59 11.35 54 ER22a ExonRegion 1 21.21 64.83 98.19 26.92 82.84 52.85 149.19 72.82 18.33 101.47 209.44 66.19 20.01 167.32 52.77 112.65 142.49 152.50 47.56 93.62 7.44 21.58 2.97 55 E22a_E23a KnownJunction 1 44.60 66.76 96.77 33.33 101.19 35.83 165.92 57.79 11.66 89.10 178.15 87.48 6.82 141.68 48.83 117.06 127.07 171.82 49.79 94.41 2.35 43.29 7.68 56 ER23a ExonRegion 0 34.84 78.67 130.26 50.41 71.55 18.90 152.09 59.23 21.31 101.05 198.61 69.70 33.01 216.99 98.06 157.16 133.91 205.17 56.99 102.21 10.98 21.75 7.91 57 E23a_E24a KnownJunction 0 55.05 66.50 145.47 59.73 57.22 17.77 142.07 49.78 22.92 98.21 167.83 87.33 33.11 111.60 62.06 102.79 99.67 156.78 33.70 103.61 11.37 13.59 4.35 58 ER24a ExonRegion 0 23.13 83.52 154.59 51.96 86.95 43.87 196.61 60.69 22.64 104.47 208.07 78.36 35.41 180.59 100.49 127.71 125.03 178.84 44.97 122.83 8.89 22.21 5.58 59 E24a_E25a KnownJunction 0 18.89 35.39 102.69 42.52 55.01 55.54 154.92 56.56 27.72 95.44 151.51 31.21 40.26 160.58 88.39 110.31 62.18 130.25 27.20 94.92 9.02 14.76 12.21 60 ER25a ExonRegion 0 33.16 69.84 137.33 54.96 68.33 21.45 143.75 62.56 22.27 112.47 211.49 77.29 41.21 211.80 112.99 153.89 142.21 188.18 66.10 132.58 3.51 31.08 9.14 61 E25a_E26a KnownJunction 0 42.16 73.74 177.97 63.00 63.24 14.03 179.79 75.45 29.34 157.06 305.24 125.14 36.20 235.04 133.51 161.92 200.93 216.01 97.79 166.25 2.78 39.74 8.02 62 ER26a ExonRegion 0 29.12 62.91 150.17 34.37 61.51 29.39 143.60 75.19 32.51 134.08 290.85 98.02 32.95 205.31 113.41 136.26 167.16 195.01 65.14 145.83 8.42 15.49 6.66 63 E26a_E27a KnownJunction 0 37.64 77.16 162.95 35.46 75.64 29.87 131.30 74.06 21.79 139.79 214.05 63.92 79.38 193.48 89.50 139.19 163.35 170.79 51.48 111.34 3.03 19.72 0.00 64 ER27a ExonRegion 0 47.18 95.07 163.45 55.31 107.34 39.92 213.99 89.74 31.08 145.97 240.83 97.77 51.30 218.26 111.85 186.38 173.13 218.94 94.23 130.36 5.14 30.65 13.98 65 E27a_E28a KnownJunction 0 32.45 59.59 153.13 32.13 114.69 44.12 250.45 76.93 24.97 131.97 166.31 62.12 32.30 200.25 70.59 114.50 128.28 130.50 56.10 104.50 2.72 14.08 4.01 66 ER28a ExonRegion 0 37.80 51.00 167.90 37.95 75.70 34.15 164.85 75.26 22.75 122.52 217.52 108.47 43.47 174.19 104.90 136.52 160.39 203.10 63.67 120.59 2.61 14.49 7.37 67 E28a_E29a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 E28a_E30a KnownJunction 0 47.86 79.66 168.74 40.29 58.57 58.83 195.91 65.76 25.40 148.49 288.13 95.13 34.25 167.34 107.05 164.57 152.03 243.04 60.80 125.09 0.00 16.41 8.45 69 ER29a ExonRegion 1 28.45 22.53 12.15 4.01 30.68 17.40 37.73 12.22 6.55 8.08 19.19 39.87 44.39 27.75 57.40 46.98 34.01 12.38 25.21 35.38 17.46 7.43 22.06 70 E29_Da NovelBoundary 0 3.41 5.99 27.38 23.51 23.34 5.00 43.68 34.79 15.45 35.73 4.53 25.51 0.00 2.47 9.89 18.11 15.80 7.71 4.05 7.61 0.00 10.90 3.50 71 ER30a ExonRegion 0 28.18 40.76 154.68 46.04 54.13 26.46 110.62 68.58 20.61 119.09 207.18 76.08 25.69 144.44 113.92 127.78 102.36 191.20 60.88 118.51 5.14 14.44 13.00 72 E30a_E31a KnownJunction 0 28.89 54.99 157.77 59.83 48.64 9.94 187.96 64.69 26.39 117.95 181.52 93.18 44.48 167.46 181.10 121.85 95.00 238.81 64.75 126.24 2.66 17.27 7.77 73 ER31a ExonRegion 0 20.86 56.15 123.88 45.09 44.36 25.40 153.39 78.68 20.03 129.43 203.33 74.55 26.00 176.53 146.83 150.15 125.68 269.29 65.73 112.07 10.86 19.02 11.77 74 E31a_E32a KnownJunction 1 35.41 67.82 153.22 34.73 62.56 24.47 132.13 68.92 18.20 109.97 152.72 18.91 14.28 171.35 140.43 106.55 95.47 203.58 122.64 105.14 11.24 14.88 23.56 75 ER32a ExonRegion 0 32.97 85.97 131.21 45.13 115.99 26.64 128.37 63.92 19.05 97.63 150.95 60.37 15.98 141.73 125.77 102.89 105.78 111.31 48.84 90.10 6.08 18.63 6.09