Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	LAS1L	Gene	0	67.92	71.40	210.18	161.49	113.46	112.64	61.97	168.90	102.25	102.97	158.45	74.80	60.25	138.10	127.11	119.62	111.06	108.11	105.06	159.00	58.15	34.79	37.46
2	312391	Transcript	1	16.77	11.26	18.76	7.65	10.50	14.25	6.42	5.98	5.32	9.35	56.20	2.00	24.53	20.61	23.66	29.72	57.38	33.12	11.76	28.64	19.83	10.90	13.10
3	484069	Transcript	0	26.15	20.96	103.35	123.00	79.32	91.02	29.16	102.77	74.18	64.53	22.42	20.75	24.16	22.31	13.50	19.71	13.34	34.17	49.20	64.67	17.15	7.46	9.89
4	374804	Transcript	0	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	1.50	0.00	0.00	0.00	0.00	0.00	4.45	0.00	0.00	2.36	0.00	0.00	0.00	0.00	0.00
5	374811	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	374807	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	469091	Transcript	0	13.40	16.97	31.16	41.38	33.33	21.18	19.96	43.38	26.06	20.23	15.58	7.64	4.16	12.18	8.53	11.44	7.44	18.41	14.53	33.24	7.85	7.84	2.05
8	ER1a	ExonRegion	1	16.77	11.26	18.76	7.65	10.50	14.25	6.42	5.98	5.32	9.35	56.20	2.00	24.53	20.61	23.66	29.72	57.38	33.12	11.76	28.64	19.83	10.90	13.10
9	E1_Ad	KnownBoundary	1	179.07	97.22	87.58	67.66	127.42	195.63	116.63	36.80	36.34	50.66	354.25	16.96	46.91	223.20	243.40	270.44	304.25	188.86	121.04	233.81	119.17	59.46	112.68
10	ER1b	ExonRegion	1	69.85	49.45	52.88	32.85	35.35	83.87	47.17	21.65	15.93	27.89	191.56	4.33	35.30	136.00	116.20	145.01	178.42	108.04	55.83	130.57	73.19	34.87	58.89
11	ER1c	ExonRegion	1	88.89	63.04	60.04	38.84	40.14	99.94	62.23	24.20	18.53	33.83	219.38	4.33	37.52	167.28	153.77	194.67	196.40	133.96	71.67	157.45	88.15	45.84	73.42
12	ER1d	ExonRegion	1	36.66	30.36	128.38	87.59	45.17	67.25	38.68	118.87	73.38	89.20	237.75	28.57	35.65	173.74	161.68	220.39	168.60	203.85	141.07	220.64	78.53	45.06	72.32
13	E1a_E2a	KnownJunction	1	33.34	50.06	257.41	158.89	58.49	68.88	30.47	230.59	133.53	132.00	350.14	32.26	68.02	188.89	165.52	216.35	189.15	324.33	146.36	224.54	100.82	43.23	64.28
14	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	1.50	0.00	0.00	0.00	0.00	0.00	4.45	0.00	0.00	2.36	0.00	0.00	0.00	0.00	0.00
15	ER2a	ExonRegion	0	19.47	76.60	241.04	144.92	108.05	159.48	99.19	232.85	133.18	143.17	393.58	106.31	111.82	235.66	194.75	174.88	220.27	154.83	155.00	244.22	120.43	58.36	42.98
16	E2a_E3a	KnownJunction	0	64.01	90.25	299.40	190.32	108.32	116.41	69.60	301.57	154.54	208.31	381.89	214.87	182.62	361.88	200.14	186.96	239.36	203.49	186.08	217.06	114.23	53.95	63.77
17	I2	Intron	0	6.40	10.72	24.78	21.55	5.85	19.22	23.34	27.34	14.32	7.69	7.33	12.46	12.22	10.26	6.01	11.09	13.16	15.90	17.41	40.23	5.10	5.76	2.83
18	I2_SR1	SilentIntronRegion	0	5.08	11.11	20.81	16.19	4.74	19.65	19.15	23.84	13.35	5.75	6.89	7.30	6.39	12.48	6.16	13.38	14.68	17.93	16.13	40.39	5.53	4.54	3.35
19	I2_AR1	ActiveIntronRegion	0	7.80	10.41	29.04	27.22	7.04	18.93	27.80	31.13	15.42	9.74	7.85	17.86	18.30	8.07	5.91	8.82	11.71	13.95	18.85	40.37	4.70	7.06	2.33
20	E3_Aa	NovelBoundary	0	13.19	12.43	44.17	60.63	33.53	23.00	28.31	25.75	16.64	17.54	17.32	6.00	34.90	7.71	10.38	12.05	30.48	39.09	18.64	42.70	5.44	11.21	7.85
21	ER3a	ExonRegion	0	98.69	109.00	279.10	180.80	151.14	163.97	104.54	283.12	151.35	182.36	496.70	216.23	162.74	442.67	272.22	312.84	310.61	246.60	249.37	291.73	130.43	93.88	84.83
22	E3a_E4a	KnownJunction	0	147.14	101.30	403.18	248.02	193.38	167.86	123.21	350.53	200.29	205.84	415.74	163.10	100.81	493.67	271.34	272.58	270.78	297.05	207.44	322.78	126.64	80.64	63.25
23	ER4a	ExonRegion	0	140.65	115.79	355.45	216.22	185.34	156.12	117.74	301.68	182.30	165.07	421.07	144.77	177.36	425.92	272.51	348.21	314.79	228.72	276.27	292.19	140.42	92.51	110.70
24	E4a_E5a	KnownJunction	0	96.39	112.55	275.33	183.99	120.88	98.98	78.34	263.70	137.18	124.40	278.60	95.13	129.86	283.77	184.44	157.14	281.35	138.00	115.02	265.45	129.11	53.76	29.19
25	ER5a	ExonRegion	0	93.45	167.80	319.77	220.90	200.86	149.83	120.88	249.80	161.21	151.52	419.19	232.47	184.01	392.91	231.96	262.69	315.83	217.37	190.86	275.80	128.19	71.75	83.11
26	E5a_E6a	KnownJunction	0	122.47	205.42	340.35	226.01	186.59	197.61	132.58	250.59	161.08	195.39	416.63	227.02	142.20	327.21	195.69	300.26	347.17	215.23	223.72	300.16	107.86	100.61	82.12
27	ER6a	ExonRegion	0	119.92	162.77	329.60	196.28	159.01	135.47	102.23	246.62	144.01	183.55	466.98	307.76	150.68	391.86	212.72	291.08	312.95	203.84	177.36	267.95	95.98	103.87	94.78
28	E6_Da	NovelBoundary	0	42.67	77.82	98.16	121.93	80.73	35.49	16.61	42.27	46.61	44.75	21.32	20.41	19.32	24.78	4.45	25.21	17.11	44.11	78.12	73.31	17.48	8.57	7.85
29	E6a_E7a	KnownJunction	1	123.58	173.06	289.49	170.11	109.17	86.09	103.74	195.14	88.74	135.79	406.21	409.33	147.23	452.77	231.16	313.76	312.20	159.26	133.65	215.27	74.94	80.40	70.85
30	E6a_E8a	KnownJunction	0	0.00	7.76	41.66	30.20	27.76	28.34	12.14	50.27	46.01	24.28	5.05	6.30	6.33	19.60	0.00	3.93	4.21	20.48	21.37	29.53	8.40	12.31	7.43
31	I6	Intron	0	12.44	35.70	36.70	42.59	25.51	16.90	15.88	21.48	24.86	14.66	15.20	15.01	7.14	10.56	9.49	14.17	7.34	35.10	30.37	42.25	9.28	5.79	6.30
32	I6_SR1	SilentIntronRegion	0	15.88	50.28	52.78	66.88	31.61	19.62	21.15	32.57	36.32	20.66	19.61	23.77	9.12	13.02	10.46	17.35	10.55	51.18	42.05	57.66	12.86	8.98	8.16
33	I6_AR1	ActiveIntronRegion	0	7.94	16.40	15.40	10.28	17.56	13.41	8.94	6.76	9.66	6.73	9.42	3.34	4.55	7.36	8.28	10.03	3.09	13.78	14.93	21.93	4.55	1.56	3.85
34	E7_Aa	NovelBoundary	0	24.60	60.12	34.74	57.10	28.61	21.35	35.55	35.94	41.46	29.31	9.11	7.05	14.28	18.54	8.90	19.57	13.28	36.23	4.52	45.00	11.55	2.88	19.46
35	ER7a	ExonRegion	1	88.62	164.94	337.10	214.47	156.73	125.10	108.91	213.61	129.35	148.34	423.60	334.63	86.60	324.82	254.31	300.00	315.09	199.12	209.08	253.58	114.25	77.92	68.26
36	E7a_E8a	KnownJunction	1	64.16	128.73	359.63	211.40	145.08	118.23	128.47	215.31	138.02	140.65	370.62	273.69	66.55	272.94	324.00	287.70	306.40	232.59	168.66	323.29	115.21	81.01	68.63
37	ER8a	ExonRegion	0	74.03	167.16	348.65	193.59	159.39	142.67	120.63	230.07	152.08	151.58	366.82	223.02	95.33	310.02	279.33	339.03	248.14	197.26	172.86	270.19	118.54	80.72	65.56
38	E8a_E9a	KnownJunction	0	43.27	126.69	284.76	182.93	163.92	139.47	59.05	241.76	134.69	138.77	75.60	11.55	63.63	72.46	42.40	92.80	50.86	167.89	84.24	242.05	68.08	22.60	42.68
39	E8a_E10a	KnownJunction	0	49.12	66.50	97.84	48.01	15.03	5.79	33.30	29.04	15.86	16.65	277.12	106.23	60.87	259.52	275.91	293.60	207.01	38.84	97.13	32.85	75.55	61.91	27.49
40	E9_Aa	NovelBoundary	0	10.45	8.62	22.74	30.70	3.90	11.64	10.25	29.41	26.62	17.76	17.00	12.90	13.15	6.77	4.45	19.57	0.00	15.13	0.00	25.69	11.55	3.12	23.30
41	ER9a	ExonRegion	0	37.56	93.50	254.47	119.13	71.14	73.03	46.10	131.23	71.25	92.88	77.35	29.12	25.47	58.15	43.58	107.99	56.96	169.78	90.31	178.43	47.44	25.82	26.31
42	E9_Da	NovelBoundary	0	35.34	52.49	154.10	225.31	142.02	98.52	53.39	262.50	148.20	83.16	58.28	24.61	51.46	37.08	10.51	42.47	48.25	96.96	121.70	206.64	47.75	26.88	55.14
43	E9a_E10a	KnownJunction	1	30.01	118.99	234.44	72.68	45.67	26.80	27.73	66.29	42.13	61.65	91.87	37.66	0.00	70.52	77.38	135.18	52.83	139.49	98.64	145.67	32.56	33.62	21.60
44	E10_Aa	NovelBoundary	0	98.98	35.91	209.13	167.81	82.51	160.59	53.17	156.29	95.22	83.00	26.69	35.86	39.77	47.74	56.74	48.53	39.64	82.49	72.94	136.65	20.39	5.94	15.79
45	ER10a	ExonRegion	1	109.47	118.08	345.34	165.92	105.16	123.53	85.33	188.52	116.43	120.83	326.16	136.01	53.63	311.01	285.39	296.44	241.99	199.40	159.22	238.13	112.19	63.65	54.11
46	E10_Da	NovelBoundary	0	9.78	12.83	50.06	51.81	39.30	60.76	10.47	56.81	55.55	40.56	4.95	13.95	6.82	14.24	4.45	3.50	4.77	30.72	41.04	72.74	8.90	8.82	11.78
47	E10a_E11a	KnownJunction	0	195.81	162.41	339.55	136.71	84.04	60.42	99.50	128.97	71.99	88.91	267.54	96.93	65.09	376.01	358.74	296.67	205.61	165.65	154.83	211.82	90.69	61.85	66.50
48	I10	Intron	0	18.61	16.09	25.69	24.11	31.37	61.01	14.94	38.88	35.61	20.79	6.23	3.88	1.13	8.51	5.83	8.28	5.32	12.52	20.07	37.11	10.33	3.36	5.59
49	I10_AR1	ActiveIntronRegion	0	18.72	16.18	25.84	24.25	31.55	61.36	15.02	39.10	35.81	20.91	6.27	3.90	1.14	8.56	5.85	8.32	5.35	12.59	20.19	37.32	10.39	3.38	5.63
50	E11_Aa	NovelBoundary	0	9.11	24.47	71.97	43.45	38.03	103.12	19.25	68.88	40.60	46.90	4.16	0.00	0.00	9.42	0.00	15.55	0.00	36.52	42.35	48.00	14.21	10.90	14.43
51	ER11a	ExonRegion	0	109.85	88.56	244.68	125.19	69.89	94.35	80.70	147.41	87.31	94.26	252.76	77.79	42.11	263.57	257.00	177.80	173.32	118.28	90.56	209.73	79.31	45.49	43.95
52	E11_Ab	KnownBoundary	0	95.13	107.35	259.36	152.29	80.98	89.21	60.86	187.83	111.46	100.71	199.58	91.83	55.84	269.88	240.44	179.61	158.30	142.93	93.46	191.88	69.31	47.76	55.14
53	ER11b	ExonRegion	0	76.71	80.13	249.48	125.17	67.88	68.30	58.70	142.92	68.52	77.45	210.18	47.62	36.29	239.57	209.14	190.89	178.19	176.44	82.54	186.82	76.36	47.01	58.89
54	E11_Da	KnownBoundary	0	13.63	3.35	18.57	27.40	11.63	18.00	19.48	50.07	27.86	25.33	27.38	11.10	0.00	33.61	9.39	23.24	18.05	38.63	17.22	54.14	27.43	5.45	28.94
55	E11a_E11c	KnownJunction	0	3.48	0.00	3.67	11.12	7.81	2.73	5.92	0.00	0.00	1.05	2.68	0.00	0.00	0.00	0.00	0.00	0.00	11.52	0.00	11.44	2.66	6.18	0.00
56	E11a_E12a	KnownJunction	0	75.12	102.35	260.49	79.14	68.51	55.82	69.87	67.53	17.53	43.76	210.05	50.42	59.90	284.54	178.50	173.63	160.64	142.93	83.39	170.85	66.35	23.88	76.49
57	ER11c	ExonRegion	0	39.41	38.95	113.15	133.65	108.13	123.67	46.22	163.73	110.39	98.28	39.74	29.79	48.32	34.78	22.56	35.92	26.68	49.73	75.43	111.50	31.46	14.92	19.78
58	E11_Ac	KnownBoundary	0	61.20	63.80	173.62	234.87	116.04	114.03	33.65	210.75	120.37	108.98	29.90	18.61	33.76	38.97	8.90	22.73	28.42	57.95	57.98	114.09	38.98	2.45	20.57
59	ER11d	ExonRegion	0	49.36	56.13	190.86	219.23	118.31	107.25	54.05	173.16	112.52	93.04	43.15	25.30	15.86	41.63	26.46	23.83	17.08	55.11	54.15	108.23	33.75	9.78	14.43
60	E11_Db	KnownBoundary	0	34.30	50.98	86.66	123.86	50.51	49.69	33.03	173.04	91.32	67.40	29.48	31.36	6.66	29.73	9.02	37.77	29.27	41.99	42.92	58.23	26.63	14.21	11.27
61	E11b_E12a	KnownJunction	0	12.89	2.96	93.55	112.34	50.51	58.38	12.10	41.81	37.96	30.78	5.11	11.70	0.00	9.83	4.45	3.50	0.00	18.61	22.97	17.83	2.84	0.00	0.00
62	ER11e	ExonRegion	0	23.32	33.93	58.65	71.64	58.85	39.62	34.00	86.75	52.13	39.41	28.48	15.29	8.31	24.36	17.06	22.88	14.88	25.30	29.05	55.03	13.04	9.50	4.10
63	I11	Intron	0	14.04	11.11	53.43	27.87	24.49	16.32	15.12	33.16	14.49	19.58	16.73	12.96	11.71	14.31	12.37	15.28	13.58	26.98	24.40	40.37	10.24	7.09	9.79
64	I11_SR1	SilentIntronRegion	0	19.16	13.57	56.98	30.10	33.77	24.96	24.88	47.37	16.62	22.99	25.19	20.52	19.95	15.77	13.60	17.93	18.56	32.11	32.97	46.84	11.34	9.83	13.77
65	I11_AR2	ActiveIntronRegion	0	11.63	9.96	51.81	26.85	20.12	12.26	10.53	26.48	13.50	17.99	12.75	9.40	7.83	13.63	11.80	14.05	11.24	24.58	20.38	37.36	9.73	5.81	7.92
66	E12_Aa	NovelBoundary	0	35.12	18.29	51.89	48.78	44.14	17.83	13.87	26.33	14.50	9.37	17.85	6.30	12.82	9.83	22.62	20.59	17.11	15.84	20.99	38.03	2.59	2.76	3.93
67	ER12a	ExonRegion	0	173.00	132.96	507.25	304.91	149.43	117.31	94.06	178.62	70.45	109.92	283.76	122.21	70.85	294.42	321.59	227.92	211.06	207.27	136.13	234.21	75.50	61.64	60.80
68	E12_Da	NovelBoundary	0	5.93	2.57	13.28	27.07	36.08	8.06	12.19	11.75	6.28	8.57	15.21	0.00	6.82	12.42	0.00	23.84	4.77	32.46	12.33	33.05	2.97	13.72	0.00
69	E12a_E13a	KnownJunction	1	120.17	139.78	886.25	568.56	159.42	100.51	107.27	222.37	96.09	133.32	405.05	228.97	114.44	201.37	386.18	301.72	188.13	314.84	160.19	239.24	91.12	50.40	54.80
70	I12_SR1	SilentIntronRegion	0	14.82	5.62	18.52	23.61	20.97	7.08	9.59	16.72	7.43	6.02	5.34	5.75	7.76	8.72	8.57	7.20	9.98	17.13	8.24	19.65	6.01	2.91	6.94
71	I12_AR3	ActiveIntronRegion	0	12.03	5.46	26.47	33.68	26.15	17.24	19.07	14.82	3.95	4.19	7.68	2.35	9.25	5.34	7.63	3.99	8.02	8.18	6.28	33.37	9.70	0.00	0.00
72	I12_AR5	ActiveIntronRegion	0	8.58	5.46	23.87	25.99	13.64	5.45	7.69	18.26	7.05	12.03	8.78	9.10	2.35	7.12	7.77	15.18	10.39	24.41	8.08	14.28	2.94	2.66	6.25
73	ER13a	ExonRegion	1	196.23	175.18	563.31	360.08	202.29	121.78	102.09	203.43	77.59	119.20	343.72	188.98	52.37	268.45	425.98	265.86	225.55	246.24	166.02	226.91	95.50	65.18	74.27
74	E13a_E14a	KnownJunction	1	109.57	147.93	463.14	262.94	207.73	98.86	67.52	202.66	57.87	101.00	321.45	140.00	39.45	187.83	351.20	194.39	195.04	139.16	71.81	213.16	103.66	39.01	51.99
75	ER14a	ExonRegion	1	87.80	66.68	286.78	151.52	73.19	38.87	34.26	116.01	46.94	68.34	199.58	58.90	39.75	129.36	272.90	101.61	132.89	76.36	83.35	131.52	67.14	44.06	30.34
76	ER14b	ExonRegion	0	6.35	8.81	2.45	0.00	8.03	3.06	3.53	4.61	0.82	1.15	9.02	0.00	0.00	4.87	7.74	2.97	7.70	6.16	2.12	5.67	2.20	8.33	2.94
77	ER14c	ExonRegion	0	0.00	0.00	0.00	0.00	2.68	0.00	1.32	1.73	0.00	1.15	0.00	0.00	0.00	0.00	0.00	2.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00
78	IG13_AR8	ActiveIntergenicRegion	0	1.69	3.97	9.23	10.37	8.69	4.43	5.15	10.86	3.22	6.91	1.56	4.67	0.72	1.91	4.18	6.07	14.38	15.16	9.04	12.79	0.59	1.15	5.94
79	IG13_SR4	SilentIntergenicRegion	0	3.87	6.80	7.59	5.88	5.48	0.00	2.74	16.99	2.47	6.69	2.55	6.55	1.49	3.29	6.01	1.45	12.56	11.13	1.71	13.13	4.46	2.08	4.01
80	IG13_AR7	ActiveIntergenicRegion	0	3.02	2.91	6.13	6.81	5.35	0.00	5.30	15.56	2.47	10.32	3.87	1.86	4.02	2.78	0.41	0.42	16.50	5.54	0.00	10.03	6.61	2.08	5.87
81	IG13_SR3	SilentIntergenicRegion	0	3.22	5.59	11.64	9.76	11.38	2.42	6.69	15.15	5.54	8.50	2.16	5.36	2.94	5.39	4.57	5.34	3.96	5.07	5.15	10.71	2.77	1.62	5.12
82	IG13_AR5	ActiveIntergenicRegion	0	6.84	15.49	21.77	10.38	60.92	2.96	13.14	19.15	2.85	7.85	7.73	0.00	9.38	2.37	14.73	11.43	8.13	6.68	20.09	17.02	1.19	2.56	6.55
83	IG13_AR4	ActiveIntergenicRegion	0	4.23	10.17	22.67	7.16	61.54	1.38	11.42	14.04	2.47	7.88	6.28	0.00	9.38	3.25	11.97	11.89	6.60	5.54	19.11	14.10	0.00	0.26	1.47
84	IG13_AR3	ActiveIntergenicRegion	0	4.94	9.83	19.81	5.00	35.23	2.45	6.18	12.10	1.65	4.97	4.51	0.00	9.38	6.50	8.70	12.88	4.95	5.54	16.99	8.51	0.00	0.00	1.96
85	IG13_AR2	ActiveIntergenicRegion	0	3.31	9.15	22.29	5.11	22.41	4.13	3.72	11.34	3.71	4.66	0.36	0.00	4.98	5.89	3.99	11.15	0.00	5.08	6.37	5.59	2.75	0.00	5.87
86	IG13_AR1	ActiveIntergenicRegion	0	3.29	3.58	13.89	14.16	11.68	2.07	8.45	12.81	6.09	5.46	2.76	3.67	4.11	4.83	8.49	5.43	3.83	9.08	8.78	13.93	1.17	2.06	2.74