Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP4-646N3.1 Gene 0 0.55 2.81 4.42 5.70 2.32 2.06 2.40 1.45 3.42 2.44 1.00 8.82 7.05 3.30 0.98 1.67 2.43 0.24 0.55 3.40 0.48 0.72 0.38 2 432359 Transcript 0 0.13 0.87 1.16 1.86 0.88 0.55 0.81 0.44 1.71 0.86 0.31 3.21 2.17 1.21 0.43 0.38 0.84 0.05 0.13 1.26 0.20 0.16 0.09 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.11 0.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER2a ExonRegion 0 0.00 0.00 0.00 1.01 2.60 0.00 0.66 0.00 2.39 0.75 0.00 1.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 0.00 6 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER3a ExonRegion 0 0.00 0.00 0.00 0.68 0.00 0.00 0.44 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.49 0.00 0.00 0.00 8 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 I3 Intron 0 3.19 7.40 23.01 20.66 8.90 3.56 5.97 6.03 1.28 6.66 1.07 11.14 10.74 4.78 2.48 2.06 2.40 1.32 1.21 5.31 0.11 1.12 0.51 10 I3_AR1 ActiveIntronRegion 0 9.26 17.27 56.76 42.22 19.39 5.57 7.55 18.01 2.39 12.88 1.56 18.01 16.53 8.80 4.56 5.11 4.68 2.32 2.90 10.33 0.00 2.74 0.30 11 I3_SR2 SilentIntronRegion 0 1.77 6.61 17.18 19.70 8.24 3.80 6.91 4.33 1.28 7.12 1.22 12.54 11.25 4.95 2.06 1.43 2.38 1.36 0.77 4.86 0.13 1.00 0.79 12 E4_Aa NovelBoundary 0 0.00 0.00 13.16 20.88 4.07 0.00 2.25 2.46 1.79 7.58 0.00 12.60 34.09 2.47 0.00 0.00 0.00 1.87 0.00 2.88 0.00 0.00 0.00 13 ER4a ExonRegion 0 0.00 2.50 1.65 4.54 1.26 0.87 1.85 1.17 2.76 2.38 0.95 11.83 6.25 5.08 2.34 0.00 3.12 0.00 0.00 4.04 0.00 0.00 0.00 14 E4_Da NovelBoundary 0 0.00 14.67 14.72 17.81 4.33 2.67 0.00 0.00 3.59 5.18 0.00 0.00 32.79 4.94 0.00 0.00 0.00 2.49 0.00 3.26 0.00 2.57 0.00 15 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I4 Intron 0 0.89 5.76 11.69 11.08 1.12 3.85 3.06 2.43 1.93 3.95 1.22 18.60 12.74 6.48 1.59 1.25 4.16 2.22 1.67 4.47 0.00 0.44 0.31 17 I4_SR1 SilentIntronRegion 0 0.89 5.79 11.73 11.13 1.13 3.86 3.07 2.44 1.94 3.97 1.22 18.68 12.79 6.51 1.60 1.25 4.17 2.23 1.68 4.48 0.00 0.44 0.31 18 E5_Aa NovelBoundary 0 0.00 7.96 15.79 23.34 4.33 2.61 8.52 4.93 0.00 5.69 12.79 13.65 12.99 2.18 0.00 0.00 0.00 0.00 0.00 5.24 0.00 5.39 0.00 19 ER5a ExonRegion 0 1.13 5.30 8.77 10.51 4.04 4.07 4.36 2.75 6.02 4.26 1.88 15.64 13.31 5.83 1.58 3.43 4.40 0.49 1.13 5.86 0.78 1.48 0.78 20 IG44 Intergenic 0 1.47 5.08 12.66 12.87 5.81 3.22 4.59 4.17 1.96 6.64 1.70 14.21 9.08 6.71 2.06 4.26 5.34 3.40 4.12 7.77 0.61 1.45 0.54 21 IG44_AR1 ActiveIntergenicRegion 0 2.37 8.36 18.29 23.74 7.37 4.41 6.00 7.13 2.42 8.25 3.14 28.66 18.93 7.84 3.68 6.12 5.26 3.49 7.85 12.94 1.45 2.59 1.32 22 IG44_SR2 SilentIntergenicRegion 0 1.10 5.18 14.50 14.59 7.48 3.98 4.89 5.51 2.69 7.40 0.90 9.63 3.66 8.35 2.21 3.93 4.93 3.53 4.63 7.45 0.00 1.44 0.61