Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPR34 Gene 0 40.34 13.75 15.39 25.95 51.35 25.57 26.92 23.89 36.49 17.08 0.77 41.78 31.85 65.64 55.94 65.71 14.26 3.51 1.60 13.03 1.11 2.60 4.20 2 378142 Transcript 1 30.26 4.51 3.20 12.72 45.77 31.01 12.47 7.26 20.39 8.03 0.26 20.12 16.31 61.62 35.66 109.66 5.70 1.78 0.30 3.01 0.01 0.64 2.00 3 378138 Transcript 0 3.30 0.00 0.00 1.40 8.32 0.00 0.84 0.00 0.87 0.00 0.00 3.15 0.00 11.01 9.64 15.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 5.85 0.96 2.38 5.21 20.93 16.88 4.17 0.51 5.49 2.26 0.00 0.00 10.76 34.82 31.66 68.71 6.50 0.00 0.00 5.51 0.06 3.19 0.78 5 E1_Ab KnownBoundary 1 18.74 5.85 7.10 13.65 73.01 47.59 17.31 7.60 15.42 3.84 0.00 5.70 20.29 99.36 93.58 186.02 12.90 0.00 0.00 12.46 2.35 6.25 3.33 6 ER1b ExonRegion 1 22.36 8.99 2.54 12.07 73.34 66.23 27.63 3.15 13.71 7.98 0.00 14.93 14.07 77.54 58.25 182.90 3.64 0.00 0.00 4.56 2.85 1.34 7.49 7 E1_Da NovelBoundary 0 9.71 22.63 9.70 13.38 4.07 5.79 24.69 18.69 10.39 6.53 1.95 0.00 13.64 4.83 4.45 15.47 13.00 0.00 4.05 15.66 2.90 0.00 0.00 8 E1a_E2a KnownJunction 1 60.38 0.00 0.00 16.28 92.02 53.78 17.53 5.01 15.74 6.69 0.00 25.06 28.08 53.09 13.47 90.23 0.00 0.00 0.00 0.00 0.00 0.00 3.33 9 E1a_E2b KnownJunction 0 2.82 0.00 0.00 2.80 16.64 0.00 1.68 0.00 1.74 0.00 0.00 0.00 0.00 19.66 9.64 19.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 Ix Intron 0 2.46 13.24 5.10 9.29 7.05 1.28 6.77 9.18 6.28 5.30 0.00 4.48 15.55 1.30 2.82 1.61 5.63 0.86 0.74 7.09 0.68 0.65 1.59 11 Ix_SR1 SilentIntronRegion 0 2.47 13.28 5.11 9.32 7.07 1.28 6.79 9.21 6.30 5.31 0.00 4.49 15.59 1.31 2.83 1.62 5.65 0.86 0.74 7.11 0.69 0.65 1.60 12 ER2a ExonRegion 1 56.09 4.07 0.00 14.31 85.62 66.48 26.48 5.19 17.60 8.03 0.00 25.98 23.45 65.37 20.31 95.11 3.30 0.00 0.00 0.00 0.00 0.00 3.67 13 ER2b ExonRegion 1 30.75 9.14 1.09 12.04 31.06 17.33 16.19 9.90 26.98 11.38 0.00 22.96 14.39 45.15 37.81 88.03 3.71 0.00 0.00 0.02 0.00 0.00 4.75 14 E2_Da NovelBoundary 0 3.63 30.85 10.47 18.38 45.76 5.79 10.42 14.95 10.71 4.00 2.68 0.00 5.84 14.19 8.90 20.42 4.58 6.01 4.24 10.55 6.30 3.12 8.37 15 E2a_E3a KnownJunction 1 11.34 0.00 0.00 6.29 0.00 10.45 0.00 6.41 27.98 9.48 0.00 19.96 0.00 54.92 32.39 88.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E2a_E3b KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 2.35 9.64 11.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix Intron 0 11.02 14.11 10.16 10.15 12.06 1.83 14.46 9.67 8.19 7.16 1.09 6.34 15.75 6.17 9.67 13.96 14.01 4.67 4.15 10.19 1.74 1.18 3.54 18 Ix_SR1 SilentIntronRegion 0 12.56 13.75 6.27 7.61 7.24 0.38 8.68 11.52 6.90 5.51 1.21 7.42 15.59 5.25 6.89 8.97 5.83 1.82 0.66 10.63 2.29 1.30 2.14 19 Ix_AR2 ActiveIntronRegion 0 15.21 11.81 10.61 12.20 14.75 1.62 19.81 12.17 11.24 8.08 0.38 5.57 16.46 5.40 8.32 11.41 20.80 4.80 7.21 10.26 1.30 1.23 3.76 20 Ix_AR4 ActiveIntronRegion 0 10.14 16.18 13.63 11.90 14.84 2.59 17.02 9.65 8.81 8.84 1.32 6.32 17.39 6.84 12.14 19.59 16.65 7.19 5.13 11.54 2.12 1.26 4.34 21 E3_Aa NovelBoundary 0 8.52 51.24 25.61 31.03 10.61 2.84 24.38 34.83 9.87 4.24 0.00 18.91 6.82 7.00 27.81 52.55 8.70 14.43 8.28 6.07 3.15 5.82 4.35 22 ER3a ExonRegion 1 17.65 17.53 13.63 21.51 30.26 7.48 14.15 19.20 35.15 13.70 1.28 29.60 19.27 99.91 80.49 206.08 18.69 8.91 1.51 9.55 0.00 0.00 2.22 23 E3_Ab KnownBoundary 0 30.82 43.94 24.66 42.15 51.36 7.27 28.31 29.16 40.19 15.55 0.00 38.56 19.97 87.17 38.69 139.79 21.13 20.31 4.52 20.33 0.00 0.00 0.00 24 ER3b ExonRegion 0 43.41 14.34 17.16 28.02 52.90 24.98 28.51 26.38 38.84 18.30 0.84 45.52 34.66 65.28 56.30 52.49 15.32 3.70 1.81 14.48 1.16 2.91 4.18