Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RBM3 Gene 0 389.91 587.18 668.44 588.93 294.09 200.80 274.43 294.92 207.79 152.98 343.29 283.35 225.44 568.30 528.27 421.68 381.62 295.48 316.75 260.23 262.99 383.22 232.87 2 472897 Transcript 0 7.26 4.75 5.63 0.00 2.94 11.21 10.70 1.10 0.98 0.00 7.36 0.00 0.00 11.89 8.82 9.52 8.12 3.75 9.11 2.01 4.25 12.18 6.81 3 376764 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 488216 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 376756 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 466764 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 490127 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 9.16 0.00 0.00 2.94 0.00 0.00 0.00 8 491240 Transcript 0 12.17 16.29 78.73 41.37 21.14 15.40 18.93 26.13 18.28 17.81 39.55 9.28 9.77 43.94 24.03 40.74 43.09 51.56 36.37 26.43 42.49 42.77 29.72 9 489344 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 376759 Transcript 0 70.12 214.44 189.25 192.31 137.82 125.14 112.35 134.19 103.50 71.24 40.33 50.71 39.31 62.59 39.16 61.76 47.61 133.58 99.10 83.09 55.99 52.97 104.53 11 430348 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 485213 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 376755 Transcript 0 28.60 17.83 7.82 8.67 6.45 13.54 7.03 3.01 5.10 0.26 5.95 9.77 0.00 15.99 23.73 18.82 15.32 4.93 21.89 8.24 9.49 22.38 11.45 14 491236 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 354480 Transcript 0 93.83 98.52 258.71 168.68 103.86 53.97 62.58 72.04 39.26 57.26 56.95 51.20 56.39 93.49 69.27 107.54 59.34 84.15 53.87 48.37 37.88 50.77 56.64 16 ER1a ExonRegion 0 14.52 9.49 11.27 0.00 5.87 22.41 21.40 2.21 1.96 0.00 14.71 0.00 0.00 23.78 17.65 15.36 11.46 7.49 18.23 4.02 8.51 24.37 13.62 17 E1_Ab KnownBoundary 0 32.60 28.88 16.74 8.49 8.66 31.29 41.56 1.77 4.77 7.39 18.69 0.00 0.00 20.31 17.80 16.58 14.21 10.65 13.27 11.51 8.77 29.33 27.74 18 E1_Ac KnownBoundary 0 7.19 6.58 17.83 2.06 8.32 5.79 10.55 2.55 3.41 1.67 5.16 0.00 0.00 9.71 6.30 8.72 9.26 7.42 23.62 0.00 0.00 12.25 4.35 19 E1_Ad KnownBoundary 0 36.52 3.35 13.90 3.63 12.99 25.78 44.69 4.15 6.83 4.22 18.79 6.45 0.00 85.53 22.87 29.14 65.83 23.42 33.22 25.95 34.66 18.55 42.94 20 ER1b ExonRegion 0 32.05 12.20 27.48 3.12 9.56 40.61 45.58 3.46 5.82 0.00 29.55 0.00 0.00 78.19 28.60 33.12 48.10 17.69 44.14 13.37 26.13 45.24 33.56 21 ER1c ExonRegion 1 125.30 96.49 102.38 52.13 56.19 107.64 148.15 34.31 38.72 23.74 155.69 0.00 0.00 247.27 224.12 259.91 231.23 151.52 163.57 102.34 111.95 127.82 177.08 22 E1_Ae KnownBoundary 0 41.19 33.28 7.07 0.00 34.38 31.46 44.87 0.00 3.47 1.42 66.49 0.00 0.00 18.01 37.83 104.08 47.69 34.41 28.71 42.19 12.54 43.72 56.00 23 E1_Af KnownBoundary 0 0.00 0.00 8.63 5.86 0.00 0.00 0.00 12.16 3.27 3.28 0.00 0.00 0.00 0.00 6.43 0.00 0.00 57.91 0.00 0.00 0.00 0.00 0.00 24 E1_Ag KnownBoundary 1 1204.73 1153.35 808.69 646.70 566.72 737.64 851.55 301.52 244.04 170.87 980.51 5.40 18.67 1414.22 777.31 1785.86 1250.49 1213.67 916.64 696.19 930.74 600.76 981.68 25 ER1d ExonRegion 1 477.52 431.43 327.27 275.93 238.35 344.05 516.34 150.24 138.81 92.81 576.90 0.00 11.18 787.82 850.29 915.41 820.65 618.14 495.45 417.84 462.95 330.64 581.46 26 ER1e ExonRegion 1 829.67 905.76 585.48 509.17 397.62 587.92 741.42 245.09 192.43 149.33 961.42 0.00 14.07 1592.94 1330.51 1709.57 1335.54 1099.78 895.72 654.47 921.59 606.72 976.14 27 ER1f ExonRegion 1 982.97 1091.16 679.38 578.45 486.99 733.00 803.83 271.37 208.03 162.21 1097.06 3.71 14.07 1949.18 1439.44 2002.36 1508.51 1266.76 1044.80 705.77 1084.54 697.98 1074.39 28 ER1g ExonRegion 1 1234.16 1631.15 1032.89 1015.57 672.99 1002.00 951.36 370.59 313.08 247.55 1342.48 18.96 6.72 2071.72 1340.85 2582.70 1819.33 1773.04 1429.11 878.38 1594.29 870.97 1262.92 29 E1a_E2c KnownJunction 1 1359.87 1915.84 1701.03 1652.64 810.27 1070.69 1066.26 538.60 443.22 345.85 1133.60 37.21 13.15 1447.36 1391.31 2410.22 1623.00 2160.96 1541.13 893.50 1626.41 710.43 1056.80 30 ER2a ExonRegion 0 28.60 17.83 7.82 8.67 6.45 13.54 7.03 3.01 5.10 0.26 5.95 9.77 0.00 15.99 23.73 18.82 15.32 4.93 21.89 8.24 9.49 22.38 11.45 31 E2_Ab KnownBoundary 0 80.24 48.35 47.96 34.89 27.67 41.62 21.90 8.67 15.39 5.48 12.69 18.91 0.00 35.73 52.17 52.55 27.12 19.28 49.98 15.72 23.85 51.44 32.35 32 ER2b ExonRegion 0 27.07 24.85 55.45 40.66 16.85 16.62 14.44 19.21 21.63 10.52 16.69 10.36 1.11 29.18 23.75 39.92 17.30 19.00 27.42 18.07 27.13 30.74 23.77 33 E2_Ac KnownBoundary 0 13.11 10.79 26.34 31.20 15.28 16.87 16.69 18.57 20.34 12.06 27.22 0.00 6.33 17.25 26.70 3.76 8.23 28.11 4.14 36.30 17.11 27.98 49.60 34 ER2c ExonRegion 1 300.42 432.60 910.67 734.92 197.33 254.82 243.79 342.01 290.78 221.13 937.62 177.40 142.94 614.19 496.95 647.41 1164.24 842.85 513.73 459.26 1061.86 295.68 339.30 35 E2_Da KnownBoundary 0 6.15 2.57 57.04 48.58 11.38 0.00 3.75 19.10 14.50 17.76 40.43 18.31 0.00 26.66 4.45 19.40 50.58 35.98 18.54 49.60 47.94 36.25 29.88 36 E2a_E2d KnownJunction 1 82.38 218.91 1115.31 848.11 69.86 82.23 108.15 472.80 323.72 275.01 1507.33 130.24 78.40 1277.19 924.78 667.86 2071.53 717.48 655.36 908.65 1835.96 509.34 487.42 37 E2a_E2h KnownJunction 0 0.00 3.16 33.20 13.32 0.00 0.00 0.00 0.00 9.17 1.21 10.27 0.00 0.00 2.47 0.00 4.36 4.49 11.73 13.27 17.45 2.84 8.94 3.93 38 ER2d ExonRegion 0 12.17 16.29 78.73 41.37 21.14 15.40 18.93 26.13 18.28 17.81 39.55 9.28 9.77 43.94 24.03 40.74 43.09 51.56 36.37 26.43 42.49 42.77 29.72 39 E2_Ad KnownBoundary 0 34.90 12.10 71.02 29.73 8.06 16.69 5.92 34.91 16.41 16.71 35.80 0.00 6.49 48.21 23.36 27.00 38.71 42.66 13.08 24.67 36.70 14.33 27.66 40 ER2e ExonRegion 1 158.55 371.94 1284.15 1182.57 142.94 126.29 190.21 495.09 420.66 330.34 908.94 111.69 91.15 2208.05 1640.05 2037.07 1387.52 1351.35 1300.64 901.91 1183.01 958.51 957.22 41 E2_Db KnownBoundary 1 192.85 644.10 1384.40 1443.61 307.05 218.00 306.22 520.12 473.11 329.17 511.02 211.42 185.38 1862.80 1549.54 2499.43 718.09 1654.94 1556.84 771.16 615.55 889.36 1172.04 42 E2b_E2h KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.67 4.77 0.00 0.00 0.00 0.00 0.00 0.00 43 ER2f ExonRegion 1 199.30 598.15 1309.72 1188.03 397.67 280.08 303.37 452.57 433.16 264.50 483.07 188.27 136.01 1432.47 1187.55 1553.46 732.71 1331.03 1010.02 592.46 706.14 621.00 748.13 44 E2_Dc KnownBoundary 0 53.71 57.23 111.29 103.22 130.05 112.49 45.00 78.90 73.93 58.13 48.49 25.06 6.82 121.02 84.43 112.96 70.50 99.07 81.23 113.39 95.94 65.27 138.97 45 E2c_E2e KnownJunction 0 12.74 23.88 57.54 83.44 35.91 27.77 3.84 13.14 10.13 22.91 7.11 12.30 0.00 21.72 37.21 11.19 12.90 28.56 17.60 14.96 6.18 2.82 15.54 46 E2c_E2g KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 9.16 0.00 0.00 2.94 0.00 0.00 0.00 47 E2c_E2h KnownJunction 1 236.19 665.67 1140.56 909.11 529.46 248.66 353.04 286.53 322.28 126.65 452.01 224.32 121.75 867.57 787.57 916.00 716.60 1300.31 644.54 407.15 689.00 383.44 390.62 48 ER2g ExonRegion 0 85.78 125.74 154.87 99.30 166.53 173.41 110.98 79.95 68.01 68.09 74.16 21.59 25.32 162.44 93.23 90.89 84.06 84.76 48.96 78.88 95.77 82.19 88.81 49 E2_Ae KnownBoundary 0 380.66 188.98 165.58 101.25 60.02 63.94 42.31 85.60 70.31 85.50 52.91 30.31 18.51 210.14 130.42 111.00 62.55 123.78 59.67 78.62 84.02 77.95 107.56 50 ER2h ExonRegion 0 237.60 179.77 241.40 175.06 93.44 75.42 53.51 108.95 75.18 94.92 80.40 29.33 38.13 187.19 164.39 133.84 81.78 160.69 81.12 99.38 109.08 87.34 102.83 51 E2_Dd KnownBoundary 0 199.52 175.43 239.94 166.45 119.86 86.31 64.48 91.27 58.27 65.30 73.39 29.26 38.80 175.29 171.33 121.08 87.42 134.06 28.52 110.90 105.76 93.93 71.79 52 E2_Af KnownBoundary 0 176.25 250.81 98.16 82.81 62.73 79.90 64.92 57.91 45.60 72.02 93.08 18.76 32.63 177.06 144.39 58.87 70.13 64.87 69.18 81.37 74.81 78.62 80.84 53 ER2i ExonRegion 1 200.68 274.72 273.70 216.64 98.27 106.03 73.18 118.95 95.55 119.80 118.96 26.76 35.81 226.86 182.12 113.75 116.28 168.99 62.11 137.23 135.63 123.50 106.52 54 E2_Ag KnownBoundary 0 222.26 333.62 217.14 182.99 88.46 127.82 47.30 80.22 79.60 83.86 99.34 28.96 55.03 217.91 161.57 100.83 89.85 104.26 39.62 127.71 92.36 114.32 95.09 55 ER2j ExonRegion 1 219.75 350.75 264.63 207.75 80.51 135.14 64.70 114.98 98.54 124.21 134.29 28.80 47.10 240.86 147.71 109.45 120.70 153.12 72.16 140.43 125.42 138.15 120.27 56 ER2k ExonRegion 1 173.29 363.26 300.47 231.13 92.40 114.95 65.58 107.99 91.42 126.51 122.33 32.98 50.11 230.02 148.88 152.35 116.39 156.38 65.23 153.10 121.26 123.58 137.42 57 E2_De KnownBoundary 0 212.70 504.84 378.61 293.74 202.63 123.05 101.18 115.87 103.82 132.48 108.40 96.03 88.79 234.74 172.32 209.18 147.55 186.29 78.21 209.39 132.27 121.85 193.18 58 ER2l ExonRegion 0 234.90 443.65 412.31 331.35 181.33 167.38 122.64 147.58 130.26 131.96 125.03 59.31 76.45 223.75 193.95 210.82 111.73 220.29 104.55 168.96 129.20 127.18 164.41 59 E2_Df KnownBoundary 0 198.70 325.47 299.43 271.26 123.85 103.12 63.15 123.47 99.04 97.67 99.34 17.56 19.97 126.14 80.23 149.28 38.99 150.02 60.24 90.06 73.64 102.87 142.98 60 E2_Dg KnownBoundary 1 109.80 284.69 207.74 233.50 92.19 74.45 87.57 119.40 93.98 78.44 78.39 69.62 78.40 137.80 106.56 190.55 53.39 115.24 98.83 112.24 50.04 172.07 192.41 61 E2g_E2h KnownJunction 0 39.64 112.41 136.93 126.89 65.62 41.96 14.31 24.52 19.53 29.04 43.01 18.16 0.00 57.68 51.67 22.81 34.60 38.80 12.89 43.46 19.03 13.84 22.62 62 ER2m ExonRegion 1 181.60 434.64 432.23 422.04 178.38 135.09 108.56 195.55 147.31 145.43 150.51 74.76 82.54 248.82 171.37 254.41 92.21 239.35 127.63 166.67 103.13 197.93 246.09 63 ER2n ExonRegion 0 268.05 358.47 373.05 357.99 163.53 134.76 110.08 191.42 144.50 136.39 135.71 70.00 82.49 209.96 178.13 212.28 128.03 170.64 116.42 141.22 122.64 180.12 204.93 64 E2_Ah KnownBoundary 1 419.78 556.02 208.92 204.50 361.21 197.16 137.70 95.74 80.96 55.01 110.34 65.87 106.81 300.25 270.10 217.12 77.14 103.92 100.80 114.92 125.22 132.75 124.80 65 ER2o ExonRegion 0 509.81 1199.03 1375.53 1096.25 819.26 551.36 640.80 415.89 373.26 219.12 670.82 245.89 273.10 1380.33 1228.12 879.98 809.57 1054.26 632.25 584.12 989.07 511.00 476.72 66 E2_Dh KnownBoundary 0 590.62 1456.85 1272.93 1028.97 893.55 655.59 948.70 438.79 308.68 220.64 715.55 387.58 379.68 1538.47 1542.37 816.62 808.04 898.46 637.85 663.97 1009.07 498.81 465.74 67 ER2p ExonRegion 0 386.52 1310.64 1320.47 992.88 495.99 491.04 781.28 439.47 331.29 251.71 594.45 230.12 247.15 1461.44 1354.80 751.68 887.69 557.82 487.75 613.28 870.63 601.25 370.95 68 E2i_E3a KnownJunction 1 425.04 1913.28 1648.08 1347.81 542.36 649.29 966.55 566.33 454.25 312.54 746.77 240.38 272.22 1562.78 1347.43 722.89 1130.34 541.13 537.33 680.08 935.43 698.43 369.02 69 ER3a ExonRegion 1 374.95 1525.34 1242.05 876.34 383.66 475.66 747.12 374.81 334.72 231.67 614.36 162.52 234.50 1399.87 1233.26 643.81 1095.90 494.77 441.30 563.34 921.32 691.89 314.22 70 ER3b ExonRegion 1 621.30 1286.05 1347.03 1169.36 342.12 313.35 560.11 435.01 375.68 249.14 594.84 165.25 320.05 1344.40 1228.91 775.93 893.06 567.65 553.94 587.11 793.15 855.36 319.31 71 E3_Db NovelBoundary 0 512.68 582.66 900.44 1004.67 203.06 116.41 310.46 358.21 277.72 188.22 280.91 117.64 95.45 582.91 503.25 413.05 337.17 304.31 282.74 413.74 349.91 439.53 142.98 72 E3c_E4a KnownJunction 0 1169.24 1186.10 2451.89 2200.02 636.93 419.70 716.27 803.65 573.55 442.09 654.80 298.75 420.91 1727.13 1640.40 962.31 916.69 362.01 701.01 824.98 501.57 1114.45 451.49 73 ER3c ExonRegion 0 881.77 1049.17 1975.39 1907.31 479.78 313.44 606.99 689.39 521.41 385.71 620.91 287.41 345.98 1598.63 1455.31 916.33 818.88 441.61 620.90 746.64 556.01 976.37 397.12 74 ER4a ExonRegion 0 1297.55 1366.98 2076.58 2050.09 733.09 464.21 713.76 902.62 639.05 438.39 1101.29 725.24 818.02 1897.18 1918.32 1190.41 1154.13 496.80 924.86 795.92 502.42 1296.32 560.65 75 E4_Da KnownBoundary 0 79.87 80.71 215.49 142.17 95.93 46.34 33.12 64.40 33.82 43.81 75.39 42.76 95.94 64.28 81.34 52.12 77.98 78.89 29.27 34.58 42.26 54.25 15.79 76 E4a_E4b KnownJunction 0 1675.85 1778.50 1815.70 1993.15 712.14 411.64 710.58 957.48 611.86 392.16 1306.23 1267.91 1079.47 1594.69 1590.34 1154.48 1166.24 535.12 880.59 881.48 359.30 1434.70 441.84 77 ER4b ExonRegion 0 55.75 67.11 212.61 174.29 69.92 40.59 33.45 56.75 38.15 45.42 49.34 66.17 55.48 68.27 47.24 133.52 59.48 100.13 55.65 33.52 33.72 62.11 44.38 78 E4_Db KnownBoundary 1 84.68 50.06 272.70 226.51 96.26 56.10 43.41 60.95 47.37 54.07 36.96 49.37 46.59 81.46 38.57 284.88 60.12 104.42 111.72 41.35 39.78 76.79 82.89 79 ER4c ExonRegion 0 93.83 98.52 258.71 168.68 103.86 53.97 62.58 72.04 39.26 57.26 56.95 51.20 56.39 93.49 69.27 107.54 59.34 84.15 53.87 48.37 37.88 50.77 56.64 80 E4_Ab KnownBoundary 0 127.50 85.58 249.84 155.66 116.55 58.77 65.58 76.07 44.07 61.16 79.86 45.46 67.53 127.91 72.56 46.23 58.34 22.34 23.72 63.21 20.08 76.05 27.74 81 ER4d ExonRegion 1 974.58 1927.03 1809.54 1764.41 840.35 491.14 863.77 910.17 580.71 391.50 981.44 1630.17 1054.28 1472.34 1374.26 1082.65 950.87 408.61 733.27 603.69 267.76 1365.58 472.17 82 E4_Dc KnownBoundary 1 1025.52 2127.65 2457.01 1951.50 555.52 290.29 615.23 941.50 567.64 436.88 1198.41 2514.97 1009.84 1481.50 1544.48 1167.81 1134.92 370.18 945.06 626.39 386.23 1047.34 449.52 83 ER4e ExonRegion 0 1732.77 1811.14 2209.84 1705.65 1021.73 483.70 877.33 944.74 544.70 406.81 1171.12 1345.78 875.06 1503.25 1472.35 980.47 1019.98 524.33 714.55 621.56 479.22 1012.94 456.79 84 E4_Dd KnownBoundary 0 4044.12 3498.52 3403.96 2597.51 1712.56 709.31 1542.96 1156.56 721.43 530.63 1441.84 830.82 989.38 1932.02 2224.99 1955.90 1210.66 978.92 1515.90 878.73 711.12 1282.41 870.62 85 ER4f ExonRegion 0 1378.45 1884.98 1890.98 1491.21 730.48 348.89 687.09 791.14 505.64 359.80 1072.85 1140.32 828.54 1993.79 2095.42 1262.83 1091.75 679.21 1120.28 691.33 766.95 993.90 611.36 86 E4_De KnownBoundary 0 872.90 1344.30 1310.21 985.66 778.10 419.82 715.66 828.22 528.55 461.92 783.83 665.92 459.22 1056.34 1783.67 669.31 1138.76 655.92 665.71 760.04 816.20 609.46 408.04 87 ER4g ExonRegion 0 812.69 879.04 959.52 907.00 529.61 238.08 379.86 445.99 302.60 185.49 411.83 262.53 339.31 783.91 952.85 430.73 441.94 301.04 484.74 328.44 291.42 753.83 249.05 88 E4_Df KnownBoundary 0 22.00 95.18 83.11 137.94 82.77 91.82 65.27 120.43 78.59 62.37 14.90 24.61 29.71 30.08 20.27 27.26 20.66 34.95 34.73 39.12 6.30 33.00 23.47 89 E4_Dg KnownBoundary 0 14.52 37.10 90.56 83.64 110.78 52.64 59.18 70.61 66.96 31.62 25.74 61.67 26.95 21.78 20.89 14.78 13.00 33.20 41.22 53.63 20.20 13.72 42.94 90 ER4h ExonRegion 1 247.90 362.99 171.25 215.17 367.58 238.16 220.77 170.47 136.33 91.18 43.01 113.11 95.56 87.50 88.49 64.27 39.20 92.62 88.79 93.62 26.17 102.87 102.05 91 ER4i ExonRegion 0 70.12 214.44 189.25 192.31 137.82 125.14 112.35 134.19 103.50 71.24 40.33 50.71 39.31 62.59 39.16 61.76 47.61 133.58 99.10 83.09 55.99 52.97 104.53 92 IG40 Intergenic 0 82.29 291.33 302.31 275.73 139.74 120.38 107.54 169.47 133.03 107.38 53.82 39.79 27.86 63.42 46.00 60.46 43.11 192.88 103.64 98.69 73.91 66.43 107.62 93 IG40_AR1 ActiveIntergenicRegion 0 82.52 292.13 303.13 276.49 140.11 120.70 107.81 169.94 133.40 107.67 53.97 39.90 27.93 63.59 46.12 60.62 43.23 193.41 103.93 98.95 74.12 66.62 107.90