Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PRICKLE3 Gene 0 13.67 0.92 7.02 2.90 3.62 2.40 3.34 6.65 4.84 5.26 61.42 18.07 20.40 46.88 68.85 35.66 31.58 0.77 1.00 1.34 18.69 17.43 21.30 2 417014 Transcript 0 3.13 0.00 0.67 2.25 0.00 0.00 0.98 0.95 0.00 1.89 7.10 2.64 2.85 5.61 11.79 9.11 1.27 0.76 0.00 0.79 5.29 0.88 2.89 3 376317 Transcript 0 22.67 2.53 2.48 1.90 4.35 4.13 6.46 7.82 3.84 3.88 31.14 13.54 21.28 29.09 43.26 33.57 22.10 0.59 2.78 3.31 11.51 16.80 15.88 4 376310 Transcript 0 14.11 0.36 8.08 1.32 2.42 0.65 1.17 6.16 2.19 3.86 14.95 5.47 6.55 14.64 15.83 8.90 9.44 0.49 0.00 1.09 8.03 3.28 11.35 5 432913 Transcript 0 2.79 0.00 0.37 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.45 0.00 2.59 0.89 5.48 0.00 1.64 0.00 0.00 0.00 0.00 0.00 0.00 6 453382 Transcript 0 0.08 0.00 1.19 0.00 0.00 0.02 0.02 1.49 0.00 1.09 0.29 0.05 0.06 2.60 2.65 1.60 2.52 0.00 0.00 0.00 0.03 0.05 0.33 7 ER1a ExonRegion 0 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.84 0.00 0.00 0.00 0.00 0.00 0.00 1.65 0.00 2.94 8 ER1b ExonRegion 0 6.73 0.00 0.14 0.00 5.13 0.00 2.27 0.00 0.00 0.02 15.29 1.69 0.00 16.02 20.37 17.83 12.78 0.00 0.00 0.00 5.53 3.73 13.38 9 E1a_E3b KnownJunction 0 6.74 0.00 1.36 0.00 0.00 0.00 2.25 0.00 0.00 0.00 9.53 0.00 0.00 0.00 13.35 4.19 0.00 0.00 0.00 0.00 3.15 2.27 0.00 10 ER2a ExonRegion 0 1.86 0.00 1.12 0.00 0.00 1.98 0.00 0.00 0.00 0.00 1.35 0.00 0.96 0.42 6.08 0.00 0.72 0.00 0.00 0.00 0.00 0.00 0.00 11 E2a_E3b KnownJunction 0 6.52 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 6.82 2.24 8.90 0.00 4.21 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 0.08 0.00 1.19 0.00 0.00 0.02 0.02 1.49 0.00 1.09 0.29 0.05 0.06 2.60 2.65 1.60 2.52 0.00 0.00 0.00 0.03 0.05 0.33 13 E3_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.85 0.00 0.00 0.00 0.00 0.00 7.77 0.00 0.00 3.93 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3b ExonRegion 1 4.51 1.22 2.19 0.82 0.00 0.47 0.62 2.01 2.12 7.21 44.00 4.33 1.43 26.14 30.69 16.05 25.82 0.74 3.82 1.28 16.00 5.81 7.46 15 E3a_E4a KnownJunction 1 7.04 0.00 5.00 3.76 0.00 0.00 1.99 1.93 5.12 8.76 65.02 23.26 0.00 42.91 78.00 30.59 25.71 2.57 0.00 0.00 15.07 18.80 18.35 16 E4_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 4.33 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 8.70 0.00 0.00 0.00 0.00 2.63 12.72 17 ER4a ExonRegion 1 4.65 0.06 3.01 3.57 4.57 1.27 2.08 3.69 3.88 7.36 86.78 13.95 7.65 51.67 69.11 40.43 41.05 1.82 1.77 0.59 17.29 22.50 30.91 18 E4_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.32 0.00 0.00 4.71 15.08 4.19 0.00 1.53 0.00 0.00 5.68 8.70 11.78 19 E4a_E5a KnownJunction 0 13.85 0.00 0.00 0.00 4.16 5.22 5.65 6.04 5.30 7.20 87.23 19.21 12.82 58.27 31.52 23.75 63.30 2.03 0.00 0.00 19.58 26.94 18.27 20 ER4b ExonRegion 0 3.13 0.00 0.67 2.25 0.00 0.00 0.98 0.95 0.00 1.89 7.10 2.64 2.85 5.61 11.79 9.11 1.27 0.76 0.00 0.79 5.29 0.88 2.89 21 E4_Db NovelBoundary 0 0.00 0.00 0.00 9.09 12.05 0.00 0.00 0.00 2.46 1.45 12.95 12.60 6.01 7.77 0.00 8.63 4.77 0.00 0.00 0.00 2.97 5.63 17.84 22 E5_Aa NovelBoundary 0 16.45 2.63 9.67 3.06 0.00 6.81 2.25 0.00 1.24 5.59 4.79 18.91 6.82 4.94 13.35 3.50 3.93 0.00 0.00 3.26 2.35 0.00 15.28 23 ER5a ExonRegion 1 21.11 0.82 3.60 3.69 5.66 2.49 7.64 7.29 4.79 6.39 111.09 17.70 13.58 74.91 78.89 42.65 37.90 0.94 1.43 0.62 21.55 31.42 32.82 24 E5_Da KnownBoundary 0 21.26 0.00 0.00 3.73 7.47 0.00 0.00 2.46 1.53 1.34 14.06 6.30 6.82 26.96 10.38 4.27 18.23 0.00 0.00 0.00 12.29 6.12 8.71 25 E5a_E6a KnownJunction 0 20.00 0.00 1.83 5.83 0.00 2.90 5.65 1.81 3.27 2.95 85.92 12.15 31.00 71.75 83.19 37.60 34.41 0.00 0.00 3.26 19.65 8.51 29.45 26 ER5b ExonRegion 0 14.11 0.36 8.08 1.32 2.42 0.65 1.17 6.16 2.19 3.86 14.95 5.47 6.55 14.64 15.83 8.90 9.44 0.49 0.00 1.09 8.03 3.28 11.35 27 E5_Db NovelBoundary 0 6.96 0.00 0.00 2.03 3.23 2.90 0.00 3.20 1.48 3.33 2.53 0.00 13.64 7.83 15.95 4.36 0.00 2.40 0.00 0.00 3.15 9.19 8.71 28 E6_Aa NovelBoundary 0 0.00 0.00 4.32 0.00 0.00 2.38 2.03 2.18 1.45 1.05 7.00 0.00 0.00 9.36 10.75 8.54 12.06 2.40 0.00 0.00 8.83 3.12 4.18 29 ER6a ExonRegion 0 14.86 0.00 5.04 4.48 1.98 4.33 2.98 5.12 9.51 7.58 104.53 26.82 19.00 88.82 95.70 63.34 35.26 0.00 0.00 0.86 26.75 22.60 36.43 30 E6_Da NovelBoundary 0 3.63 0.00 1.66 1.80 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 2.12 5.19 0.00 0.00 1.70 0.00 0.00 2.35 0.00 12.29 31 E6a_E7a KnownJunction 0 10.15 0.00 7.48 7.23 3.48 0.00 0.00 5.79 9.64 10.72 129.24 50.27 15.10 103.83 102.23 42.55 46.84 0.00 0.00 3.13 50.04 40.29 12.55 32 E7_Aa NovelBoundary 0 12.97 0.00 1.83 0.00 7.30 0.00 5.08 4.35 1.36 1.50 2.42 6.30 6.82 4.77 4.45 0.00 8.13 0.00 0.00 0.00 8.46 0.00 0.00 33 ER7a ExonRegion 1 14.75 0.85 7.50 4.56 5.35 2.79 3.73 11.28 10.74 6.70 130.05 27.27 17.22 89.03 124.04 68.52 59.24 1.38 0.28 1.64 39.33 29.64 41.50 34 E7a_E8a KnownJunction 0 6.89 3.16 5.94 1.53 8.15 0.00 4.15 10.56 8.51 4.35 83.13 41.11 25.97 73.46 92.22 59.13 60.87 0.00 4.61 2.88 41.95 37.35 0.00 35 E8_Aa NovelBoundary 0 10.00 0.00 2.96 1.66 0.00 0.00 2.25 0.00 0.00 6.21 14.95 19.96 0.00 3.00 17.80 6.58 19.64 1.82 0.00 0.00 10.26 3.00 11.95 36 ER8a ExonRegion 0 15.39 0.88 10.95 6.57 2.98 5.99 1.02 7.19 9.11 5.16 94.79 19.19 18.18 69.08 114.67 47.36 52.37 0.00 0.56 0.74 31.18 28.17 23.56 37 E8a_E9a KnownJunction 1 20.30 2.89 9.91 7.96 10.95 5.68 0.00 9.49 12.67 5.00 110.87 0.00 13.64 51.09 63.91 50.07 33.94 0.00 0.00 0.00 25.58 8.33 15.37 38 ER8b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 I8_AR1 ActiveIntronRegion 0 2.04 0.00 0.88 0.65 1.00 0.00 0.64 1.66 1.48 1.03 8.04 4.59 2.49 4.61 15.20 11.98 6.11 0.00 0.51 1.37 3.37 4.02 1.89 40 I8_SR1 SilentIntronRegion 0 3.53 0.00 0.75 0.00 5.59 0.03 1.30 0.00 0.91 0.80 3.19 6.00 0.00 1.48 6.62 12.62 3.36 0.00 0.00 0.00 4.64 3.36 0.00 41 E9_Aa NovelBoundary 0 13.48 0.00 2.87 0.00 3.57 0.00 0.00 1.93 0.00 3.20 0.00 12.60 0.00 2.47 0.00 3.93 11.97 0.00 0.00 0.00 3.15 5.33 4.35 42 ER9a ExonRegion 0 14.65 0.44 16.12 3.78 2.52 1.53 3.30 9.97 3.48 7.89 77.91 21.79 20.70 54.95 92.94 31.96 39.70 1.40 0.54 0.36 30.18 24.84 23.70 43 E9a_E10a KnownJunction 0 14.15 3.35 18.57 7.13 4.33 0.00 6.36 5.09 1.68 11.60 82.23 16.66 18.83 49.21 109.03 51.61 63.21 0.00 0.00 0.00 43.86 31.66 12.46 44 ER10a ExonRegion 0 9.82 0.40 13.85 3.93 4.93 1.72 2.51 7.97 7.69 7.42 94.92 36.84 47.55 74.28 118.90 50.35 48.95 1.07 0.00 0.67 25.81 21.34 29.11 45 E10_Da KnownBoundary 0 54.82 0.00 5.41 0.00 23.68 2.38 10.82 12.16 7.55 8.95 124.40 71.12 116.39 154.69 271.09 160.64 71.44 1.53 0.00 0.00 39.35 40.78 48.49 46 ER10b ExonRegion 0 22.67 2.53 2.48 1.90 4.35 4.13 6.46 7.82 3.84 3.88 31.14 13.54 21.28 29.09 43.26 33.57 22.10 0.59 2.78 3.31 11.51 16.80 15.88