Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-24O6.1 Gene 0 0.96 0.92 1.28 0.50 1.54 0.83 0.65 1.06 0.61 0.63 0.55 1.76 2.26 0.88 3.73 0.98 0.82 0.98 0.26 0.79 0.36 0.43 1.33 2 451208 Transcript 0 1.67 1.76 1.08 0.21 1.78 0.77 1.19 0.74 0.42 0.00 0.85 1.35 1.95 1.44 2.74 1.35 1.80 0.23 0.07 0.59 0.10 0.81 0.41 3 456553 Transcript 0 0.00 0.00 1.63 0.00 4.16 2.61 1.77 0.00 1.79 0.00 2.68 0.00 13.31 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 2.39 0.00 4 ER1a ExonRegion 0 0.42 0.14 0.18 0.20 0.26 0.00 0.05 0.42 0.00 0.00 0.00 0.00 0.34 0.00 0.00 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 5 E1_Da NovelBoundary 0 22.89 62.55 22.94 55.64 61.38 68.14 43.28 39.51 49.48 43.14 11.00 6.30 6.66 12.07 4.45 4.36 9.07 14.34 4.61 42.44 6.05 17.27 0.00 6 E1a_E2a KnownJunction 0 0.00 2.96 0.00 0.00 0.00 0.00 2.21 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E2_Aa NovelBoundary 0 24.82 46.90 23.74 45.38 71.22 24.08 25.04 28.26 40.48 25.65 22.11 7.05 0.00 24.60 9.52 7.09 14.31 9.29 17.88 8.76 5.62 22.66 12.80 8 E2_Ab NovelBoundary 0 29.63 31.77 14.61 12.19 12.31 39.52 43.15 13.60 18.89 16.06 5.21 32.11 22.89 20.01 9.52 4.36 4.11 11.57 32.19 8.25 0.00 20.88 19.55 9 ER2a ExonRegion 0 0.00 1.90 0.00 0.00 0.00 0.00 1.32 1.73 0.00 0.00 0.00 0.00 1.25 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2b ExonRegion 0 2.16 2.12 4.80 2.43 8.17 5.12 0.72 5.60 2.19 5.16 1.17 0.81 0.24 0.78 0.76 2.97 1.51 4.58 1.63 0.91 1.08 1.02 1.96 11 E2_Da NovelBoundary 0 41.64 5.26 41.31 83.84 81.92 31.29 42.00 44.44 48.87 29.76 17.43 58.52 68.18 23.49 14.71 3.59 13.18 9.29 0.00 22.31 5.93 6.00 15.45 12 E2a_E3a KnownJunction 0 13.93 9.14 14.67 7.76 18.25 13.80 4.20 18.28 8.30 9.83 5.32 6.30 0.00 7.18 8.90 12.39 7.95 7.09 0.00 5.94 6.24 6.25 11.27 13 E3_Aa NovelBoundary 0 85.79 114.78 60.23 152.13 87.18 51.85 66.07 59.06 63.69 33.36 24.64 17.71 6.33 30.37 23.36 16.24 9.16 30.80 8.94 30.94 16.68 11.21 18.69 14 ER3a ExonRegion 0 4.29 2.78 6.14 2.39 4.68 2.51 1.43 5.25 3.92 3.80 1.63 3.76 5.43 3.31 2.63 2.23 2.52 2.84 0.08 1.71 1.59 2.69 7.38 15 E3_Da KnownBoundary 0 54.31 160.56 33.71 39.29 35.57 63.83 53.79 28.18 24.91 5.86 14.79 17.71 0.00 14.24 9.52 16.49 25.62 26.70 16.57 14.25 5.81 8.88 19.80 16 E3a_E3b KnownJunction 0 0.00 0.00 1.63 0.00 4.16 2.61 1.77 0.00 1.79 0.00 2.68 0.00 13.31 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 2.39 0.00 17 ER3b ExonRegion 0 0.03 0.00 1.73 0.00 0.03 0.02 0.03 0.75 0.39 0.00 1.21 0.68 3.05 0.04 0.03 0.93 2.82 1.60 0.00 2.46 0.00 0.03 0.60 18 E3_Ab KnownBoundary 0 84.83 155.24 59.73 76.88 42.36 61.84 55.07 46.29 32.00 14.32 15.42 12.30 13.31 30.31 27.44 18.88 17.11 27.94 4.33 27.61 5.37 9.12 15.62 19 ER3c ExonRegion 0 0.08 1.28 2.31 0.86 0.92 0.87 1.92 0.66 1.12 0.00 1.10 2.39 4.11 0.42 1.35 2.41 1.26 4.08 0.00 0.12 0.00 0.54 0.95 20 E3_Db NovelBoundary 0 54.90 84.98 38.67 59.03 45.59 28.11 34.45 20.58 20.31 20.01 17.11 12.45 6.82 21.31 30.78 8.46 12.90 32.29 41.13 30.55 8.22 14.88 8.28 21 E3_Dc NovelBoundary 0 31.12 83.74 61.44 55.50 41.34 25.27 34.76 46.54 23.03 17.54 14.85 18.76 29.22 17.54 13.85 23.41 7.95 18.12 0.00 24.35 11.92 12.43 0.00 22 E3c_E4a KnownJunction 0 6.22 3.35 2.72 0.00 7.98 2.84 2.25 0.00 1.19 0.00 2.16 0.00 0.00 4.71 4.45 4.36 4.77 0.00 0.00 0.00 0.00 3.12 0.00 23 ER3d ExonRegion 0 3.85 2.59 2.45 1.24 2.68 1.83 1.32 0.00 1.12 0.00 1.93 4.33 4.69 3.25 2.11 2.97 3.30 0.00 0.00 0.00 0.00 2.08 0.00 24 E4_Aa NovelBoundary 0 583.44 435.38 141.39 182.09 404.84 170.41 239.54 115.34 73.38 85.45 22.48 17.56 50.32 31.73 38.32 66.73 43.01 67.98 57.23 35.79 24.77 29.82 14.60 25 ER4a ExonRegion 0 1.16 1.39 0.45 0.00 1.53 0.70 1.11 0.00 0.25 0.00 0.64 4.42 4.32 2.06 12.60 1.19 0.31 0.00 0.49 1.64 0.68 0.45 2.26