Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP3-499B10.2 Gene 0 6.15 4.69 14.22 3.23 1.47 1.01 1.89 2.12 1.72 1.12 2.54 2.35 0.21 0.83 1.39 3.10 1.09 3.22 4.54 4.67 1.45 1.49 0.97 2 452900 Transcript 0 6.16 6.64 13.42 4.35 1.84 1.26 4.32 2.96 2.40 1.05 3.25 2.46 0.00 0.91 1.95 3.87 1.52 3.87 5.85 6.52 2.03 2.07 1.35 3 439295 Transcript 0 0.32 0.10 0.86 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.45 0.00 0.26 0.00 0.00 0.00 0.00 0.00 4 IG19_AR2 ActiveIntergenicRegion 0 5.05 9.19 15.20 7.16 2.48 2.53 4.37 3.26 6.67 3.43 4.60 3.20 2.79 0.51 0.84 2.92 1.36 5.44 6.71 4.46 1.14 4.12 0.00 5 ER1a ExonRegion 0 12.32 10.52 26.85 8.71 3.69 2.53 4.39 5.92 4.79 2.09 6.50 4.91 0.00 1.81 3.89 7.74 3.03 7.74 11.71 13.03 4.05 4.15 2.70 6 E1_Da NovelBoundary 0 3.70 22.43 19.54 1.93 0.00 0.00 12.50 7.11 2.92 5.43 5.37 0.00 8.12 4.94 4.45 0.00 0.00 1.70 0.00 20.71 5.56 9.19 4.18 7 E1a_E3a KnownJunction 0 0.00 2.76 0.00 0.00 0.00 0.00 4.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 I1 Intron 0 6.63 10.01 26.63 6.04 4.71 3.93 3.34 4.12 6.47 4.97 5.50 3.25 1.41 5.03 2.74 5.42 3.27 9.34 5.09 9.18 3.66 4.40 3.76 9 I1_SR1 SilentIntronRegion 0 4.10 7.98 19.25 4.85 10.37 3.13 2.73 5.33 9.04 3.09 3.99 0.00 0.31 6.64 3.91 4.73 6.84 3.93 4.24 10.05 1.92 5.28 3.56 10 I1_AR2 ActiveIntronRegion 0 5.98 7.46 19.59 3.93 3.94 4.69 3.78 2.26 5.09 3.90 4.86 1.99 2.27 3.42 3.91 3.18 2.89 5.93 2.89 7.64 3.09 3.17 3.92 11 I1_SR2 SilentIntronRegion 0 6.80 12.43 37.33 7.87 1.64 3.15 3.53 5.56 12.60 7.73 13.56 1.94 0.00 6.84 1.60 1.62 3.79 11.12 4.95 10.86 2.46 9.85 3.07 12 I1_AR3 ActiveIntronRegion 0 7.94 10.00 32.83 6.46 4.60 4.41 3.15 5.58 7.02 5.31 6.20 3.07 0.85 5.04 2.64 6.31 3.71 14.47 8.19 10.24 4.97 3.92 4.53 13 I1_SR3 SilentIntronRegion 0 8.42 15.45 43.57 9.67 7.65 5.37 4.47 4.23 5.48 9.00 6.23 9.15 1.64 5.01 0.54 10.11 2.08 12.30 4.79 9.52 5.00 5.30 5.38 14 E2_Aa NovelBoundary 0 69.12 54.20 34.42 19.08 11.71 0.00 17.36 19.47 5.35 9.83 13.90 0.00 6.82 7.06 10.88 18.29 13.74 8.25 9.04 21.67 8.28 5.39 3.67 15 ER2a ExonRegion 0 0.96 0.00 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E2_Da NovelBoundary 0 89.57 49.53 98.46 59.37 69.61 13.63 28.88 40.95 19.01 19.47 26.69 30.31 30.03 18.48 19.78 15.21 25.71 29.18 27.86 27.87 10.93 22.17 15.45 17 E2a_E3a KnownJunction 0 0.00 0.00 1.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E3_Aa NovelBoundary 0 170.47 147.28 211.05 163.28 80.22 52.07 87.93 86.42 58.65 80.64 71.60 51.77 26.78 73.87 79.98 75.11 49.09 46.01 57.13 47.55 39.66 45.07 19.63 19 ER3a ExonRegion 0 5.23 3.05 13.20 0.17 1.00 0.70 0.97 0.00 0.00 1.65 0.78 1.20 0.39 0.80 0.00 0.51 0.00 1.38 0.62 0.00 0.00 0.00 0.00 20 E3_Da NovelBoundary 0 122.54 139.51 208.09 135.11 63.58 77.00 52.60 89.09 57.12 92.06 53.75 11.55 23.05 78.87 51.67 65.28 38.80 55.26 76.71 36.62 14.58 49.05 46.61 21 E3a_E4a KnownJunction 0 22.82 20.00 41.13 1.60 0.00 0.00 4.06 0.00 0.00 2.77 0.00 11.70 6.82 2.71 0.00 4.36 0.00 4.56 8.28 0.00 0.00 0.00 0.00 22 Ix Intron 0 10.14 15.34 20.99 5.84 1.92 1.32 2.38 2.47 0.22 1.64 2.78 1.80 4.26 2.99 2.94 3.56 4.74 6.49 5.72 9.68 3.43 2.00 2.46 23 Ix_SR1 SilentIntronRegion 0 10.23 15.48 21.19 5.89 1.94 1.33 2.40 2.49 0.23 1.65 2.80 1.82 4.30 3.00 2.97 3.59 4.79 6.55 5.77 9.77 3.46 2.01 2.48 24 E4_Aa NovelBoundary 0 22.89 32.23 33.94 7.19 10.95 2.33 8.74 3.86 2.89 4.38 9.37 0.00 6.66 0.00 0.00 7.95 0.00 1.66 12.80 21.35 0.00 3.06 4.35 25 ER4a ExonRegion 0 4.29 2.11 12.72 0.43 0.01 0.00 0.81 0.00 0.00 0.67 0.49 2.04 0.77 0.31 0.00 0.44 0.00 0.58 1.28 0.00 0.00 0.00 0.00 26 E4_Da KnownBoundary 0 67.42 56.83 200.23 119.76 16.04 13.12 43.24 43.58 39.96 46.98 40.80 6.00 6.82 35.08 49.82 27.60 16.74 30.14 45.18 29.27 33.92 22.66 31.76 27 ER4b ExonRegion 0 0.00 0.29 0.46 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.79 0.00 0.00 0.00 0.00 0.00