Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NCRNA00106 Gene 0 32.39 7.34 29.52 16.77 22.78 9.46 11.62 22.16 8.07 17.64 21.28 20.91 21.48 67.31 92.23 48.07 37.19 22.68 13.97 19.94 30.32 18.46 47.47 2 430235 Transcript 0 8.28 2.59 7.91 3.91 4.41 3.22 4.05 7.65 3.35 3.12 10.96 5.60 3.51 28.09 19.86 13.70 17.89 6.27 3.56 5.00 5.66 7.04 13.73 3 434938 Transcript 0 18.23 2.65 14.65 8.70 13.15 4.23 3.85 12.03 4.00 11.29 9.96 10.92 13.14 37.43 43.22 23.11 21.34 9.64 11.97 9.48 14.01 6.70 22.08 4 ER1a ExonRegion 0 0.71 0.00 0.85 0.00 0.00 0.00 0.00 0.29 1.10 0.00 0.97 0.72 0.00 15.16 4.43 2.64 7.89 0.00 0.00 0.00 0.06 0.00 0.49 5 E1_Da NovelBoundary 0 72.31 11.45 30.16 23.87 32.09 11.24 18.99 30.11 18.69 16.63 20.95 18.16 34.09 107.54 230.05 92.97 64.89 33.04 56.38 41.61 27.31 24.13 128.73 6 E1a_E2b KnownJunction 0 0.00 0.00 3.49 0.00 0.00 0.00 0.00 0.00 4.80 0.00 2.47 0.00 0.00 36.91 4.45 4.27 18.14 0.00 0.00 0.00 0.00 0.00 0.00 7 I1 Intron 0 20.16 4.59 32.04 16.29 15.09 6.20 9.46 15.50 11.07 10.92 15.99 9.70 9.89 52.41 106.05 60.71 44.26 33.26 15.57 21.33 28.17 13.84 40.85 8 I1_AR1 ActiveIntronRegion 0 20.26 4.61 32.20 16.37 15.16 6.23 9.50 15.57 11.13 10.98 16.06 9.75 9.94 52.67 106.56 61.01 44.48 33.42 15.63 21.43 28.29 13.91 41.05 9 E2_Aa NovelBoundary 0 3.11 3.35 19.90 10.42 3.23 0.00 3.89 5.91 6.80 4.00 9.84 6.15 6.66 16.83 9.52 8.54 12.25 8.12 4.61 14.32 8.59 5.82 3.67 10 E2_Ab NovelBoundary 0 3.33 3.35 16.56 9.69 0.00 7.10 12.94 6.37 3.33 5.64 14.69 0.00 0.00 14.01 20.52 15.81 12.44 13.27 0.00 2.75 7.48 0.00 10.93 11 ER2a ExonRegion 0 3.17 0.00 1.23 0.00 1.34 0.00 0.00 1.73 0.62 0.00 2.90 2.16 0.00 13.81 2.90 1.49 8.25 0.00 0.00 0.00 1.10 0.00 1.47 12 ER2b ExonRegion 0 20.82 3.90 23.88 12.22 11.41 5.40 8.16 16.60 5.38 14.63 17.11 9.31 8.85 71.07 107.19 40.36 35.91 15.16 10.44 16.80 37.58 19.08 40.12 13 E2_Da NovelBoundary 0 46.01 2.70 80.93 25.07 34.89 21.52 2.08 57.83 25.03 31.24 35.90 12.60 6.82 104.19 125.84 74.51 68.54 30.84 16.47 26.14 45.78 16.90 67.44 14 E2a_E3a KnownJunction 0 7.56 0.00 3.25 3.03 0.00 2.50 0.00 11.05 0.00 3.22 15.85 0.00 0.00 14.95 4.94 3.33 11.97 0.00 3.86 0.00 3.15 8.45 12.38 15 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 3.87 2.68 0.00 0.00 4.71 4.45 4.19 9.54 0.00 14.21 3.26 0.00 0.00 0.00 16 I2 Intron 0 35.06 8.43 40.90 20.25 24.48 7.77 10.65 27.66 11.71 22.55 23.64 21.73 21.13 73.84 103.60 75.18 52.33 32.26 23.63 20.39 33.10 17.06 52.62 17 I2_AR1 ActiveIntronRegion 0 33.21 5.13 34.36 17.83 39.13 10.39 14.82 20.92 9.65 24.43 20.64 14.26 18.62 76.18 95.81 62.56 50.38 26.51 12.87 21.24 31.11 13.34 47.79 18 I2_SR1 SilentIntronRegion 0 35.90 9.77 43.63 21.27 18.66 6.74 9.00 30.44 12.57 21.86 24.91 24.79 22.19 73.08 107.00 80.44 53.24 34.66 28.02 20.10 33.98 18.60 54.71 19 E3_Aa NovelBoundary 0 6.82 0.00 14.16 6.26 12.65 7.44 4.24 14.17 12.88 15.66 7.16 12.60 20.78 19.95 16.94 15.89 21.97 15.13 13.65 6.07 12.11 10.90 21.17 20 ER3a ExonRegion 0 24.85 10.36 24.06 12.63 17.66 10.37 16.19 19.26 7.52 9.25 24.55 21.69 14.05 45.35 65.60 44.54 33.59 25.06 10.40 20.00 19.45 19.72 42.07 21 E3_Da NovelBoundary 1 24.00 5.79 89.41 49.28 28.18 17.04 14.04 28.83 20.98 21.97 28.43 75.17 83.44 115.31 106.81 40.50 35.44 38.22 9.32 15.28 23.10 20.88 68.29 22 E4_Aa NovelBoundary 0 136.32 13.81 76.43 34.06 76.32 52.07 42.97 54.01 22.28 31.80 20.06 24.46 25.49 119.20 104.21 75.96 84.53 71.84 31.25 34.07 30.33 40.60 94.84 23 ER4a ExonRegion 0 51.51 7.94 42.73 26.09 38.10 12.70 11.56 31.83 11.39 30.02 24.29 30.60 39.42 93.77 122.31 63.65 46.23 28.91 21.69 25.18 40.93 20.11 64.76