Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IL3RA Gene 0 103.72 42.36 108.89 94.37 77.61 12.92 24.38 79.49 48.34 46.98 37.04 9.76 37.84 125.68 207.73 9.13 237.13 38.76 34.41 57.77 8.94 10.57 14.28 2 331035 Transcript 0 97.99 18.69 75.26 51.36 94.23 25.00 33.01 61.53 36.14 33.53 28.06 10.25 42.37 172.15 395.86 11.04 250.99 8.83 5.30 19.73 1.83 11.00 10.95 3 381469 Transcript 0 2.12 2.03 5.72 7.27 10.70 0.00 0.44 5.19 2.06 0.76 0.00 0.00 0.00 3.79 0.97 0.00 2.20 1.85 3.19 9.93 1.47 0.00 0.00 4 432757 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 6.60 1.43 7.07 3.89 4.20 0.31 1.15 0.24 4.65 1.49 2.52 0.00 2.44 3.42 3.27 0.84 13.29 0.00 0.83 1.81 0.00 0.28 0.84 6 E1_Ab KnownBoundary 0 9.56 3.29 22.18 12.09 12.48 0.00 2.25 1.56 9.11 4.06 2.63 0.00 13.47 15.54 4.45 0.00 29.83 0.00 0.00 0.00 0.00 3.12 3.84 7 ER1b ExonRegion 0 129.19 2.21 56.68 31.19 100.79 23.30 53.79 53.37 30.77 37.19 67.16 4.16 32.79 172.48 391.69 18.66 563.44 0.37 0.10 2.60 0.86 11.83 16.11 8 E1a_E2a KnownJunction 0 10.00 0.00 10.47 1.83 39.56 0.00 1.77 4.31 10.30 9.89 9.79 6.15 5.84 21.48 25.47 0.00 120.06 0.00 0.00 0.00 0.00 8.51 0.00 9 I1 Intron 0 10.22 33.01 67.43 76.96 16.37 1.01 1.89 27.84 31.06 21.85 3.02 0.80 0.75 3.22 5.36 0.14 4.71 47.94 11.72 50.78 0.41 0.86 1.76 10 I1_SR1 SilentIntronRegion 0 10.24 33.07 67.55 77.10 16.40 1.01 1.89 27.88 31.12 21.89 3.03 0.80 0.75 3.23 5.37 0.14 4.71 48.03 11.75 50.88 0.41 0.86 1.76 11 E2_Aa NovelBoundary 0 63.05 158.26 185.92 315.54 27.76 0.00 10.42 129.88 137.70 75.59 2.37 18.91 6.82 17.25 6.18 3.93 4.77 119.59 0.00 127.26 0.00 12.06 8.62 12 ER2a ExonRegion 0 80.14 97.97 133.27 109.85 46.35 6.00 8.02 88.00 56.74 61.67 75.93 14.60 22.67 207.38 377.05 17.98 674.39 48.13 14.46 86.75 4.67 20.12 20.90 13 E2_Da NovelBoundary 0 47.34 148.92 152.15 171.54 75.30 0.00 6.40 46.91 49.62 32.50 2.68 6.30 8.28 11.89 0.00 0.00 17.95 48.33 9.22 100.86 0.00 0.00 0.00 14 E2a_E3a KnownJunction 1 79.20 2.83 83.11 39.76 26.99 5.00 7.33 76.44 39.21 48.08 35.69 6.15 46.10 357.88 1225.05 36.49 399.72 0.00 0.00 0.00 2.72 28.96 48.74 15 E2a_E4a NovelJunction 0 2.82 0.00 1.30 2.03 0.00 0.00 0.00 0.00 0.00 1.67 2.63 0.00 0.00 22.72 26.70 0.00 20.48 0.00 0.00 0.00 0.00 0.00 0.00 16 E2a_E5a KnownJunction 0 3.41 0.00 0.00 0.00 4.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.60 27.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 I2 Intron 0 13.36 61.67 27.46 47.89 44.88 2.27 5.24 18.34 12.99 9.31 1.67 0.66 3.59 6.39 4.84 1.29 7.35 13.26 12.22 38.58 0.00 1.42 3.45 18 I2_SR1 SilentIntronRegion 0 13.39 61.82 27.53 48.01 44.99 2.28 5.26 18.38 13.02 9.33 1.68 0.66 3.59 6.40 4.85 1.29 7.37 13.29 12.25 38.67 0.00 1.42 3.46 19 E3_Aa NovelBoundary 0 36.97 48.68 98.05 206.50 24.70 0.00 5.56 142.40 85.99 63.90 2.68 0.00 6.49 12.54 18.42 0.00 17.39 20.77 30.59 36.82 0.00 3.00 4.01 20 ER3a ExonRegion 0 67.25 39.22 71.50 68.41 89.83 20.42 28.36 69.79 40.62 35.78 34.16 9.68 40.71 117.10 241.93 6.54 217.80 15.90 8.24 26.30 1.93 6.76 4.74 21 E3_Da NovelBoundary 0 198.18 283.70 155.02 274.89 269.86 19.65 20.01 166.35 86.83 62.00 2.32 6.15 12.99 36.08 19.90 0.00 29.17 65.99 85.93 203.32 0.00 6.06 22.28 22 E3a_E4a KnownJunction 0 64.90 0.00 52.51 22.57 131.66 62.92 60.28 47.69 20.63 24.07 17.74 18.31 33.60 119.08 144.51 3.59 214.77 0.00 0.00 0.00 2.84 5.63 0.00 23 I3 Intron 0 37.99 91.59 94.70 138.29 57.95 1.58 7.72 54.93 51.93 28.98 2.94 1.47 4.86 8.59 13.07 0.98 18.15 56.60 28.27 77.37 1.17 2.48 5.25 24 I3_SR1 SilentIntronRegion 0 38.09 91.82 94.94 138.65 58.10 1.58 7.74 55.07 52.07 29.05 2.95 1.47 4.87 8.62 13.10 0.99 18.19 56.75 28.34 77.57 1.17 2.49 5.27 25 E4_Aa NovelBoundary 0 153.81 176.22 213.83 425.55 304.58 25.04 20.45 173.17 153.53 91.55 15.58 5.55 13.64 15.60 32.88 3.93 38.99 116.44 54.40 185.04 8.34 14.08 20.57 26 ER4a ExonRegion 0 150.00 51.42 111.56 97.30 116.99 20.47 44.73 72.84 54.79 33.47 36.78 10.35 51.18 116.30 154.93 4.21 234.42 28.26 18.25 72.36 1.67 11.07 1.28 27 E4_Da NovelBoundary 0 305.68 259.76 285.44 633.15 593.97 50.37 121.71 199.17 170.60 83.67 18.48 12.00 13.64 29.73 49.82 8.72 74.24 180.94 146.92 387.08 3.15 21.80 19.63 28 E4a_E5a KnownJunction 0 128.62 0.00 57.63 28.77 105.69 16.18 24.33 40.91 25.46 26.27 15.95 6.75 40.26 150.39 212.87 4.36 188.22 0.00 0.00 0.00 0.00 2.57 0.00 29 E5_Aa NovelBoundary 0 34.08 118.07 135.63 157.46 70.46 10.51 9.94 88.93 67.68 62.91 9.95 12.00 6.49 9.59 18.79 0.00 7.95 82.41 64.38 71.27 16.56 2.63 19.89 30 ER5a ExonRegion 0 91.98 58.84 140.52 110.34 87.72 17.17 21.32 72.70 51.31 55.18 23.31 8.20 33.11 143.41 216.81 2.59 214.43 45.86 37.96 46.46 7.69 12.70 7.97 31 E5_Da NovelBoundary 0 28.08 43.74 159.13 137.41 19.86 10.90 2.25 74.14 73.15 50.77 9.69 0.00 0.00 7.30 9.64 12.90 17.77 113.58 51.01 99.71 21.44 9.37 21.51 32 E5a_E6a KnownJunction 0 45.93 0.00 65.93 36.13 56.96 8.69 23.27 42.10 25.81 26.78 25.01 0.00 28.08 144.33 200.63 3.93 168.30 0.00 0.00 0.00 0.00 12.68 0.00 33 I5 Intron 0 16.98 30.30 15.70 32.59 10.73 8.41 3.79 14.76 8.44 6.86 0.00 0.00 1.90 8.98 7.53 1.70 11.35 14.22 29.21 39.01 11.34 2.39 8.41 34 I5_AR1 ActiveIntronRegion 0 17.37 30.95 16.06 33.29 10.92 8.60 3.88 15.06 8.63 6.99 0.00 0.00 1.94 9.17 7.67 1.74 11.61 14.55 29.88 39.91 11.55 2.44 8.57 35 E6_Aa NovelBoundary 0 19.86 76.04 257.35 318.67 47.03 7.89 11.88 141.83 115.07 99.28 5.32 6.30 0.00 18.84 29.30 0.00 30.11 163.04 59.30 146.50 14.89 3.12 12.63 36 ER6a ExonRegion 0 124.59 79.98 237.03 268.02 132.51 19.01 27.12 174.35 109.06 103.69 56.83 6.90 45.43 187.53 255.77 15.02 284.80 114.27 70.11 124.89 19.99 14.99 22.99 37 E6_Da NovelBoundary 0 104.24 83.74 171.25 130.49 107.73 5.74 0.00 91.76 50.75 78.44 4.90 0.00 6.66 19.60 38.69 12.56 42.08 103.26 101.27 79.77 36.51 0.00 0.00 38 E6a_E7a KnownJunction 0 265.16 3.09 103.93 50.44 185.06 21.24 55.69 74.84 30.61 32.42 74.70 0.00 115.74 227.21 507.57 16.32 403.09 0.00 0.00 0.00 0.00 24.62 4.18 39 I6 Intron 0 85.36 91.12 156.00 223.68 51.11 6.05 11.47 136.98 102.98 95.43 9.69 6.32 12.93 22.49 33.75 7.54 34.25 137.77 79.83 128.96 27.16 12.40 13.68 40 I6_AR1 ActiveIntronRegion 0 6.68 8.46 12.90 14.13 11.69 1.06 0.00 12.28 6.05 5.98 0.00 0.00 3.46 5.21 9.47 0.16 16.50 15.27 12.74 19.15 20.65 0.00 8.04 41 I6_SR1 SilentIntronRegion 0 87.31 93.48 157.42 207.51 47.63 6.32 11.82 134.82 99.07 93.05 8.65 5.01 11.59 19.93 35.05 8.76 37.77 134.37 78.00 129.32 28.24 11.29 12.53 42 I6_AR2 ActiveIntronRegion 0 87.41 92.16 167.54 307.36 68.59 5.68 11.54 159.52 128.64 114.60 14.61 11.86 18.97 33.94 31.91 3.89 23.60 164.61 94.45 140.52 24.17 17.88 18.63 43 E7_Aa NovelBoundary 0 200.85 128.33 96.24 195.95 49.49 2.50 27.29 103.79 44.65 67.02 7.42 30.16 0.00 18.72 28.68 0.00 70.13 31.17 31.15 43.66 14.89 9.19 7.68 44 ER7a ExonRegion 0 222.81 72.73 111.75 101.41 129.30 9.95 34.33 108.49 44.68 44.95 48.36 4.91 77.45 172.51 199.72 9.08 241.80 20.43 13.23 44.28 2.84 12.76 6.14 45 E7_Da NovelBoundary 0 215.82 107.09 51.48 124.59 80.98 2.73 10.11 66.13 40.22 31.94 5.00 0.00 0.00 7.18 0.00 3.85 17.48 20.44 30.31 86.10 3.15 14.63 12.38 46 E7b_E8a KnownJunction 0 89.94 3.16 88.23 30.80 52.63 2.90 12.19 43.95 11.92 16.17 27.48 0.00 41.72 115.66 177.64 4.02 167.09 0.00 0.00 0.00 0.00 7.47 0.00 47 ER7b ExonRegion 0 161.28 36.20 99.26 51.24 81.88 9.17 16.95 78.47 25.20 26.84 37.50 0.00 46.90 126.68 153.77 5.94 211.26 4.80 0.00 29.79 4.41 7.50 0.00 48 I7 Intron 0 21.35 37.82 39.31 68.13 37.51 3.80 7.67 31.88 17.25 15.77 1.24 3.44 4.82 7.37 9.92 2.13 10.39 23.71 25.98 37.44 8.35 4.17 8.40 49 I7_AR1 ActiveIntronRegion 0 25.65 44.15 6.45 13.33 31.08 3.70 4.68 5.20 0.00 6.04 0.00 1.80 3.90 9.55 8.10 0.00 8.33 9.28 14.48 39.75 5.56 1.05 2.97 50 I7_SR1 SilentIntronRegion 0 20.70 36.90 44.88 77.43 38.70 3.83 8.19 36.40 20.16 17.43 1.45 3.73 4.98 7.04 10.26 2.48 10.76 26.18 27.97 37.18 8.84 4.70 9.32 51 E8a_E9a KnownJunction 0 107.43 6.38 71.02 30.83 44.40 10.68 10.11 34.17 24.16 18.24 42.48 18.61 40.26 129.91 206.69 3.93 162.41 0.00 0.00 0.00 0.00 3.12 6.91 52 ER8a ExonRegion 0 96.73 7.00 92.22 35.74 55.79 9.44 9.17 50.51 23.74 21.32 35.72 9.14 37.52 129.87 182.67 4.73 193.65 0.34 0.00 2.13 0.00 4.32 0.76 53 E9_Aa NovelBoundary 0 97.72 81.04 84.18 130.42 49.32 25.89 18.81 56.76 69.39 45.85 9.42 0.00 7.30 28.25 50.81 3.33 58.06 92.48 44.71 89.42 2.72 6.18 12.04 54 ER9a ExonRegion 0 109.34 13.40 85.04 52.39 50.42 7.38 16.89 61.10 27.63 32.82 40.09 6.63 69.25 142.17 172.89 5.58 185.42 7.97 11.36 26.22 6.82 8.26 3.73 55 E9_Da NovelBoundary 0 26.89 21.44 30.01 42.65 11.46 5.68 5.87 14.13 9.03 12.44 2.53 0.00 0.00 7.00 9.64 3.42 18.23 15.13 17.22 20.39 2.47 0.00 0.00 56 E9a_E10a KnownJunction 0 135.65 0.00 49.29 29.20 44.65 10.11 11.70 55.24 21.85 31.56 22.43 12.45 36.20 122.37 220.41 7.95 222.25 0.00 0.00 0.00 0.00 5.27 0.00 57 I9 Intron 0 13.85 18.75 44.11 43.18 10.54 2.59 3.35 37.35 28.46 27.57 5.60 2.40 6.54 14.29 19.17 4.20 21.84 44.38 30.31 57.56 13.76 2.94 7.20 58 I9_SR1 SilentIntronRegion 0 12.97 15.71 33.29 30.36 10.27 1.59 2.16 37.93 28.85 29.73 4.82 2.83 7.36 12.70 18.17 5.38 20.73 40.21 29.86 58.91 15.23 3.54 9.65 59 I9_AR1 ActiveIntronRegion 0 23.47 44.86 108.79 120.35 17.97 6.53 6.82 68.04 52.61 44.22 13.20 4.07 10.61 25.77 27.52 3.57 25.10 91.99 57.34 111.10 16.89 3.96 6.57 60 I9_SR2 SilentIntronRegion 0 8.05 4.51 16.77 10.29 5.09 1.72 3.36 10.61 7.58 8.66 1.22 0.00 1.22 8.66 14.74 1.88 21.96 15.14 9.08 10.11 7.68 0.66 1.86 61 E10_Aa NovelBoundary 0 20.52 14.47 29.74 35.29 16.64 5.05 4.11 21.03 14.55 15.66 2.68 0.00 0.00 14.77 22.25 3.85 34.60 30.22 30.59 36.05 5.19 0.00 11.61 62 ER10a ExonRegion 0 82.04 24.08 71.51 36.94 62.00 5.48 16.40 53.61 34.25 40.33 31.16 9.35 41.77 131.03 199.09 8.33 153.90 30.14 35.25 49.82 9.42 4.80 3.91 63 E10_Da NovelBoundary 0 99.65 101.76 280.65 292.84 71.99 22.83 13.03 117.55 109.26 79.00 23.95 6.30 20.45 40.73 17.43 15.72 55.73 196.16 62.68 226.46 13.84 5.39 11.95 64 E10a_E11a KnownJunction 0 118.54 2.76 59.84 22.18 118.59 0.00 17.14 60.17 19.59 38.65 30.64 5.55 13.47 122.49 174.30 7.01 184.76 0.00 0.00 0.00 0.00 8.82 7.94 65 I10 Intron 0 16.46 18.84 34.20 36.59 15.44 2.38 5.41 22.70 14.43 13.96 3.38 3.15 4.67 6.67 13.87 1.54 14.76 28.80 25.60 32.25 9.43 3.65 11.61 66 I10_AR1 ActiveIntronRegion 0 13.10 15.36 8.32 4.76 17.88 2.07 4.48 7.61 3.34 2.12 0.95 3.87 4.09 15.90 17.22 0.00 10.61 4.21 9.69 22.36 6.94 0.00 10.00 67 I10_SR1 SilentIntronRegion 0 16.73 19.14 35.98 38.77 15.34 2.41 5.49 23.75 15.20 14.77 3.55 3.12 4.72 6.10 13.70 1.65 15.08 30.49 26.71 33.01 9.62 3.89 11.76 68 E11_Aa NovelBoundary 0 27.04 55.78 135.18 119.07 54.50 2.61 5.52 70.98 29.22 52.30 4.95 17.86 6.17 12.36 48.71 0.00 11.50 78.18 103.16 105.59 18.47 0.00 17.84 69 ER11a ExonRegion 0 75.96 18.20 70.26 44.24 60.60 8.48 26.75 62.41 28.18 35.20 39.86 6.65 39.87 136.31 256.73 9.24 201.80 18.59 31.54 38.56 9.76 7.44 24.03 70 E11_Da NovelBoundary 0 195.59 49.60 82.08 75.25 44.14 0.00 12.06 44.94 45.63 32.58 2.32 6.30 21.59 2.30 34.86 3.59 12.44 73.25 11.86 81.11 25.27 20.88 27.83 71 E11a_E12a KnownJunction 1 62.38 0.00 44.71 24.71 40.07 2.90 3.58 61.53 24.68 17.00 16.74 0.00 26.46 72.11 279.87 3.16 136.98 0.00 0.00 0.00 0.00 0.00 0.00 72 I11 Intron 0 17.09 13.41 16.22 20.22 12.96 3.70 3.92 8.32 8.67 7.13 2.86 4.46 2.71 3.15 13.69 6.00 10.66 31.26 35.58 23.76 6.22 2.24 16.99 73 I11_SR1 SilentIntronRegion 0 17.45 12.61 16.91 21.43 13.20 3.94 3.89 8.88 8.83 7.57 2.80 4.55 2.89 3.22 14.38 6.35 11.32 32.77 36.73 24.24 6.54 2.39 17.96 74 E12_Aa NovelBoundary 0 69.20 23.09 120.16 99.49 43.04 0.00 15.02 75.90 44.44 62.86 6.48 12.00 19.80 19.37 40.67 7.78 12.90 90.33 46.31 77.34 24.90 2.69 11.69 75 I11_AR1 ActiveIntronRegion 0 12.80 27.45 6.41 2.66 10.22 0.17 4.63 0.08 6.85 0.73 4.04 3.35 0.00 2.36 3.69 0.95 1.05 9.83 19.98 18.09 1.60 0.00 2.94 76 ER12a ExonRegion 0 118.35 49.54 140.52 120.90 68.09 14.45 24.60 100.52 64.38 59.78 22.91 23.20 29.17 84.09 177.52 11.40 133.61 71.07 91.38 108.04 22.46 14.41 35.57 77 ER12b ExonRegion 0 2.12 2.03 5.72 7.27 10.70 0.00 0.44 5.19 2.06 0.76 0.00 0.00 0.00 3.79 0.97 0.00 2.20 1.85 3.19 9.93 1.47 0.00 0.00