Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PLCXD1 Gene 0 29.60 81.05 152.40 81.41 53.40 31.39 30.42 82.20 59.93 197.33 94.68 44.64 39.18 156.93 110.76 68.16 75.41 130.46 72.61 70.40 30.61 22.98 29.28 2 399012 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 3 381663 Transcript 0 6.22 32.23 24.13 0.00 0.00 0.00 0.00 0.00 24.07 25.55 0.00 0.00 0.00 0.00 0.00 4.36 7.67 6.55 24.19 3.13 0.00 3.12 0.00 4 445062 Transcript 0 0.00 0.00 1.84 4.58 9.03 0.00 0.00 0.00 0.81 11.77 3.17 0.00 0.00 1.35 0.78 0.00 6.98 7.45 6.25 0.00 5.20 0.00 2.05 5 381657 Transcript 0 0.79 2.66 4.56 4.34 2.34 2.22 1.02 3.58 3.46 10.09 2.69 0.00 0.00 3.10 2.14 1.20 3.91 7.67 4.90 2.79 2.11 0.25 0.67 6 429181 Transcript 0 0.00 0.00 3.58 0.00 0.00 0.00 0.00 0.00 1.50 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 2.97 0.00 0.00 7 443019 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 415337 Transcript 0 0.00 0.00 0.16 0.00 0.00 1.59 0.00 0.00 0.00 0.84 1.03 0.00 0.00 0.00 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 447472 Transcript 0 12.31 0.00 14.89 0.00 0.00 1.45 0.00 6.08 1.54 6.69 13.56 0.00 0.00 20.57 3.93 16.72 9.88 6.51 7.62 19.66 2.51 2.38 0.00 10 448477 Transcript 1 13.17 25.44 24.61 23.11 18.27 11.93 18.05 14.28 28.51 41.66 46.19 13.46 7.75 42.42 36.97 58.81 51.30 44.16 18.44 21.27 7.00 8.83 11.57 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 1.69 0.00 0.00 1.38 1.95 0.00 0.00 0.00 0.00 0.52 12.59 0.00 0.00 19.44 6.63 2.17 10.14 1.85 0.46 0.00 3.09 0.51 9.40 13 E1a_E3c KnownJunction 0 0.00 0.00 0.00 3.26 0.00 0.00 0.00 0.00 0.00 2.53 12.74 0.00 0.00 18.36 6.30 0.00 3.65 0.00 0.00 0.00 5.75 2.94 4.35 14 E1a_E6b NovelJunction 1 2.89 0.00 0.00 0.00 0.00 2.27 0.00 1.68 1.39 0.00 14.37 0.00 0.00 18.66 8.90 0.00 29.73 0.00 0.00 0.00 8.96 8.70 18.95 15 ER2a ExonRegion 0 0.00 0.00 0.42 2.07 1.84 0.00 0.00 0.00 0.00 3.58 1.38 0.00 0.00 2.69 1.56 0.00 1.53 2.51 2.90 0.00 2.24 0.00 0.00 16 E2a_E3c KnownJunction 0 0.00 0.00 3.25 7.09 16.21 0.00 0.00 0.00 1.62 19.96 4.95 0.00 0.00 0.00 0.00 0.00 12.44 12.39 9.60 0.00 8.15 0.00 4.10 17 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 18 ER3b ExonRegion 0 0.00 8.23 1.76 5.10 2.89 10.20 0.70 1.03 2.85 16.76 0.97 0.00 0.00 3.82 5.57 2.44 4.21 1.94 19.06 1.65 2.56 0.20 0.00 19 E3_Da KnownBoundary 0 0.00 9.14 2.45 9.12 11.97 23.57 2.16 2.55 12.73 33.47 4.74 0.00 0.00 2.24 0.00 0.00 4.58 8.58 20.71 0.00 2.84 0.00 0.00 20 E3a_E3c KnownJunction 0 0.00 0.00 3.58 0.00 0.00 0.00 0.00 0.00 1.50 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 2.97 0.00 0.00 21 ER3c ExonRegion 0 0.96 3.25 8.38 9.83 3.46 2.99 1.30 6.69 8.72 21.87 6.14 0.00 0.00 4.44 3.52 2.62 7.33 17.47 14.69 6.24 2.67 0.75 2.00 22 E3_Ac KnownBoundary 0 0.00 0.00 12.21 7.33 4.33 0.00 0.00 2.46 8.25 13.16 5.21 0.00 0.00 4.94 0.00 0.00 4.39 11.44 8.85 0.00 0.00 2.94 0.00 23 ER3d ExonRegion 0 0.47 3.25 9.65 8.46 3.75 5.07 0.67 5.20 5.17 16.95 11.45 0.00 0.00 8.43 3.78 2.34 5.65 18.61 14.24 5.92 7.77 0.51 3.52 24 E3b_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E4a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER5a ExonRegion 0 0.00 0.00 0.16 0.00 0.00 1.59 0.00 0.00 0.00 0.84 1.03 0.00 0.00 0.00 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5b ExonRegion 0 0.00 2.71 1.23 0.00 1.78 1.83 0.00 0.00 0.00 1.15 8.38 0.00 0.00 2.35 9.67 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.33 29 ER5c ExonRegion 0 6.55 0.00 9.34 0.00 0.00 0.00 0.00 3.29 1.43 3.69 6.28 0.00 0.00 18.78 2.54 8.92 6.29 5.89 1.69 11.64 1.93 1.63 0.00 30 E5b_E6b KnownJunction 0 18.08 0.00 20.43 0.00 0.00 2.90 0.00 8.87 1.65 9.70 20.85 0.00 0.00 22.37 5.32 24.52 13.46 7.13 13.55 27.68 3.09 3.12 0.00 31 E6_Aa NovelBoundary 1 45.64 79.53 24.39 35.93 61.97 19.08 16.38 26.90 30.82 60.55 95.92 18.01 12.82 81.58 64.90 71.52 64.89 50.03 13.37 19.75 0.00 15.25 7.68 32 ER6a ExonRegion 0 13.17 25.44 24.61 23.11 18.27 11.93 18.05 14.28 28.51 41.66 46.19 13.46 7.75 42.42 36.97 58.81 51.30 44.16 18.44 21.27 7.00 8.83 11.57 33 E6_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER6b ExonRegion 0 6.68 18.65 23.67 10.11 3.88 5.76 2.31 8.00 9.99 16.55 14.48 1.97 0.86 22.40 16.68 20.70 19.63 35.27 5.44 8.79 2.59 1.20 5.61 35 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER7a ExonRegion 0 6.31 11.35 13.17 1.14 0.39 11.07 2.43 2.39 1.15 4.63 9.38 0.00 0.00 32.57 19.78 11.62 4.20 4.27 2.49 14.55 0.04 1.59 2.24 37 E7_Da KnownBoundary 0 23.19 11.25 37.37 27.27 10.02 7.27 4.33 15.73 19.68 36.10 9.69 0.00 5.68 34.79 29.30 26.83 11.13 63.01 12.33 20.20 0.00 0.00 10.67 38 ER7b ExonRegion 0 11.84 13.85 3.47 0.00 0.00 1.53 0.00 3.09 0.97 2.08 0.09 0.00 0.00 7.15 7.25 8.49 0.00 7.26 0.00 4.81 0.00 0.00 0.00 39 E7_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER7c ExonRegion 0 4.71 2.34 1.10 0.00 0.00 0.00 0.00 0.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 0.00 1.62 0.00 0.85 0.00 0.00 0.00 41 E7c_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER8a ExonRegion 0 7.93 15.42 0.00 0.00 0.02 3.08 2.07 0.00 0.26 3.07 0.90 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 43 E8b_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER8b ExonRegion 0 4.68 32.32 0.00 0.00 2.68 12.93 13.87 0.00 1.24 2.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER9a ExonRegion 0 9.18 12.34 7.14 3.62 4.06 7.90 7.57 4.76 2.18 6.27 0.00 2.45 0.00 5.62 4.30 4.97 0.00 20.23 5.35 4.04 0.00 1.46 0.69 46 E9_Da NovelBoundary 0 10.08 15.98 28.18 14.28 21.82 0.00 7.60 19.14 13.28 27.99 9.42 6.30 0.00 5.06 19.90 20.85 9.44 72.29 4.80 8.63 0.00 0.00 0.00 47 E9c_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER9b ExonRegion 1 12.91 26.23 26.96 12.27 9.90 1.83 8.74 13.83 6.79 22.59 0.00 8.66 3.75 72.44 43.52 27.94 0.00 55.62 24.21 16.38 1.10 6.67 8.81 49 ER9c ExonRegion 1 13.69 29.15 25.49 11.81 6.60 1.83 6.36 12.10 7.41 22.40 0.00 6.93 9.38 91.60 52.22 25.16 0.00 51.00 21.24 12.91 2.20 6.25 8.81 50 ER10a ExonRegion 1 8.39 31.22 104.94 42.01 15.05 16.87 15.70 36.80 33.21 124.42 54.09 9.27 3.08 112.94 71.60 29.74 35.75 89.50 33.26 35.78 15.29 9.17 10.12 51 E10a_E11a KnownJunction 1 30.82 89.85 281.36 92.16 70.80 80.69 59.97 89.91 94.13 288.95 120.50 12.60 8.28 248.93 124.36 121.16 93.97 220.82 104.57 95.81 31.63 22.60 25.35 52 E11_Aa NovelBoundary 0 13.71 20.13 29.01 25.90 30.22 12.15 12.06 7.72 4.95 12.95 5.16 0.00 0.00 0.00 4.45 4.36 8.60 44.73 20.52 30.49 2.84 0.00 12.72 53 ER11a ExonRegion 0 24.08 78.30 304.53 120.78 48.71 27.31 30.01 108.81 100.44 294.61 154.61 32.19 29.66 253.60 179.60 93.98 113.23 253.99 100.21 95.90 40.72 20.22 25.86 54 E11_Da KnownBoundary 1 62.09 138.13 336.27 196.31 170.29 93.07 82.72 166.92 125.49 312.67 239.96 25.51 51.46 350.46 277.52 100.14 219.07 237.53 135.53 117.74 69.13 23.21 34.83 55 E11a_E11b KnownJunction 0 6.22 32.23 24.13 0.00 0.00 0.00 0.00 0.00 24.07 25.55 0.00 0.00 0.00 0.00 0.00 4.36 7.67 6.55 24.19 3.13 0.00 3.12 0.00 56 ER11b ExonRegion 0 34.93 92.99 193.76 105.26 70.05 44.47 43.37 115.94 74.29 271.79 130.11 70.06 61.43 222.17 152.82 93.61 105.16 185.78 107.84 99.10 45.76 34.36 44.73 57 E11_Ab KnownBoundary 1 16.74 145.96 174.77 81.04 53.14 29.30 30.91 144.13 72.66 245.84 224.06 24.31 26.46 371.83 236.23 55.54 98.83 76.32 88.19 28.38 31.63 40.23 46.18 58 ER11c ExonRegion 0 67.65 200.29 250.56 138.74 101.34 38.88 35.28 113.35 103.54 270.96 111.39 44.08 42.46 171.44 136.92 72.90 78.29 107.48 65.21 88.12 28.18 25.58 26.32 59 ER11d ExonRegion 0 1.41 4.75 5.31 3.18 3.57 3.67 1.77 4.03 1.65 5.35 1.93 0.00 0.00 4.87 2.90 0.99 4.40 5.54 0.00 0.00 3.67 0.00 0.00