Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GTPBP6 Gene 0 96.05 44.64 193.67 141.98 44.15 36.00 25.58 87.34 49.99 120.24 131.61 45.42 100.98 161.02 214.84 115.65 112.84 144.67 111.13 75.10 110.19 60.85 97.39 2 429643 Transcript 0 4.61 4.41 5.60 5.82 0.00 0.52 1.62 8.41 3.17 14.06 3.63 0.00 0.00 1.71 4.58 6.30 1.60 11.34 12.75 7.21 11.02 2.99 6.50 3 326153 Transcript 0 8.11 4.93 20.04 7.92 2.14 0.73 1.99 3.11 2.47 8.62 0.00 0.00 0.47 1.46 1.45 3.27 1.65 6.17 0.00 1.49 1.54 0.00 1.47 4 400701 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 485332 Transcript 1 34.65 12.41 29.50 38.57 13.01 8.51 6.39 21.79 10.92 28.97 17.49 18.06 48.88 23.62 32.80 20.95 16.99 28.38 28.56 19.10 24.12 15.38 26.18 6 ER1a ExonRegion 0 1.81 2.77 2.91 4.15 0.00 1.04 1.11 1.95 1.40 8.34 1.99 0.00 0.00 3.41 2.99 4.39 3.21 5.06 7.34 8.54 7.28 5.98 4.47 7 E1a_E2a KnownJunction 0 7.41 6.05 8.28 7.49 0.00 0.00 2.12 14.87 4.95 19.77 5.26 0.00 0.00 0.00 6.18 8.20 0.00 17.62 18.17 5.88 14.76 0.00 8.54 8 ER2a ExonRegion 0 14.11 12.88 31.86 17.26 2.68 7.34 3.97 9.22 9.06 29.82 39.30 2.89 4.69 59.55 67.70 24.77 37.41 33.88 31.85 29.79 30.12 22.22 30.35 9 ER2b ExonRegion 0 47.29 50.41 192.44 87.00 24.16 26.47 16.14 66.17 37.20 99.10 153.16 26.36 46.62 255.16 287.18 139.16 151.50 153.83 113.77 91.49 128.18 62.35 113.00 10 E2_Da NovelBoundary 0 9.85 14.34 15.55 9.46 3.99 8.52 8.04 27.03 11.43 33.09 7.11 0.00 6.82 9.48 13.35 8.03 0.00 23.84 8.85 14.06 5.75 5.20 16.39 11 E2a_E3a KnownJunction 1 112.09 100.64 384.88 168.18 50.00 41.17 24.86 139.98 83.56 170.06 253.85 88.38 32.30 314.32 316.09 248.74 207.48 289.84 197.84 118.31 201.02 86.22 137.26 12 E3_Aa NovelBoundary 0 23.04 2.43 15.55 9.66 0.00 0.00 4.24 21.97 20.72 47.30 5.21 0.00 0.00 11.71 9.02 7.78 11.13 35.94 4.71 16.62 23.41 5.69 6.40 13 ER3a ExonRegion 1 102.31 45.10 343.05 127.08 44.34 43.64 26.30 115.77 73.41 178.77 296.00 46.40 41.15 310.91 364.24 215.28 229.46 236.64 151.13 114.24 205.42 92.41 134.40 14 E3_Da KnownBoundary 0 117.65 12.17 100.88 84.24 15.03 33.28 8.57 52.94 37.12 80.48 24.43 18.46 6.82 62.63 73.43 29.74 29.45 76.52 41.32 88.91 59.37 23.57 61.46 15 E3a_E3b KnownJunction 1 67.64 72.03 344.07 107.98 63.75 46.05 32.11 113.57 78.30 150.10 324.87 37.21 74.67 272.24 555.17 251.99 241.05 266.09 192.48 40.40 179.71 85.85 157.41 16 ER3b ExonRegion 1 126.78 21.27 74.90 123.32 43.55 28.06 22.36 72.66 33.75 74.39 65.56 63.95 178.54 83.81 121.29 78.33 60.24 104.83 106.56 61.78 91.54 59.09 97.58 17 E3_Ab KnownBoundary 0 61.57 18.68 59.16 96.66 24.19 39.58 6.09 30.11 9.09 39.81 14.64 0.00 19.64 56.98 47.10 31.96 17.20 77.10 43.77 24.22 46.39 8.39 30.90 18 ER3c ExonRegion 1 112.88 56.95 408.31 197.85 43.96 42.43 29.34 116.84 76.33 176.97 279.48 32.35 71.12 289.35 411.99 221.95 248.52 262.68 161.78 127.81 189.29 98.88 148.46 19 E3b_E4a KnownJunction 1 216.93 97.42 483.96 289.97 65.03 61.33 42.57 114.19 67.97 163.27 363.04 25.21 99.02 316.97 433.03 308.81 285.27 374.53 248.85 137.74 190.89 103.79 233.98 20 I3 Intron 0 15.14 17.36 17.98 16.17 10.09 3.60 3.77 9.81 14.80 24.26 7.58 4.48 4.83 9.88 10.61 13.26 12.95 21.16 12.50 11.38 8.56 7.13 9.26 21 I3_AR1 ActiveIntronRegion 0 13.05 25.42 28.60 22.68 12.93 4.28 5.30 6.86 17.18 24.52 8.70 8.32 3.91 12.71 13.45 19.32 13.20 27.25 16.99 18.80 12.85 7.99 16.15 22 I3_AR2 ActiveIntronRegion 0 26.88 23.66 20.37 21.65 17.99 6.51 4.37 15.69 16.97 28.93 7.55 3.88 8.58 9.22 11.51 13.21 10.36 20.05 12.00 9.55 6.06 10.15 12.26 23 I3_SR3 SilentIntronRegion 0 18.38 15.50 24.02 21.25 7.20 1.78 2.24 18.45 18.71 37.04 7.21 3.81 7.41 12.30 17.43 12.07 14.79 22.38 12.00 6.72 13.12 3.40 4.13 24 E4_Aa NovelBoundary 0 74.16 12.43 27.53 36.99 3.99 8.69 3.97 18.03 27.98 37.04 7.16 0.00 0.00 19.72 14.46 3.85 17.58 42.78 9.41 23.65 0.00 9.12 7.09 25 ER4a ExonRegion 1 95.57 68.75 339.53 194.45 49.40 59.36 37.79 93.88 63.77 156.29 260.77 35.45 62.73 316.41 389.35 222.23 201.13 252.24 130.92 116.72 165.23 77.16 130.99 26 E4_Da NovelBoundary 0 6.96 6.58 38.59 7.16 4.16 2.56 0.00 28.67 10.85 35.30 2.37 0.00 0.00 19.25 45.24 4.36 8.60 12.60 12.61 11.19 0.00 3.12 8.19 27 E4a_E5a KnownJunction 1 142.91 94.98 405.75 265.13 30.56 76.83 33.30 82.60 72.66 173.31 254.06 47.87 60.71 385.49 445.27 275.06 191.40 264.18 182.59 102.33 148.02 87.07 180.71 28 E5_Aa NovelBoundary 0 3.78 8.62 21.58 10.92 0.00 0.00 3.36 24.56 16.41 39.08 10.16 0.00 12.99 5.47 18.67 3.16 4.77 28.60 0.00 11.89 0.00 5.57 3.59 29 ER5a ExonRegion 1 93.79 55.73 299.37 159.25 31.09 32.96 24.77 86.60 51.26 140.69 206.67 52.32 58.30 301.37 352.53 158.61 166.36 147.59 102.10 93.02 131.69 66.33 91.15 30 E5_Da NovelBoundary 0 7.56 18.62 18.51 13.02 3.90 5.51 4.20 13.72 11.11 23.42 9.21 11.85 6.82 9.48 17.80 4.36 4.77 32.67 3.95 38.35 11.31 9.06 7.00 31 E5a_E6a KnownJunction 1 124.99 71.63 385.29 195.18 64.35 65.93 30.16 137.64 78.67 181.32 247.59 36.76 56.49 357.76 466.04 159.45 177.00 167.55 101.65 87.95 179.34 58.91 87.24 32 I5 Intron 0 7.15 17.51 18.81 17.83 11.30 5.26 3.58 3.91 5.60 19.34 7.83 5.42 2.61 13.57 14.90 10.54 5.57 28.08 12.37 15.45 6.70 4.57 8.93 33 I5_AR1 ActiveIntronRegion 0 8.48 29.63 21.94 22.94 12.67 9.35 4.82 4.69 10.74 26.15 11.97 5.20 5.63 20.22 23.19 9.74 10.82 39.15 10.44 24.03 10.44 3.79 14.98 34 I5_SR3 SilentIntronRegion 0 10.31 12.54 25.89 22.64 17.67 1.32 4.60 4.43 2.09 22.39 8.62 8.66 0.00 12.45 10.30 17.95 1.27 29.09 25.03 11.29 5.51 7.91 6.85 35 E6_Aa NovelBoundary 0 24.67 24.86 49.29 42.75 24.19 2.84 2.21 42.96 30.24 53.11 19.53 0.00 0.00 14.01 20.52 11.79 31.42 69.06 20.71 20.77 18.04 2.76 8.11 36 ER6a ExonRegion 1 84.46 92.89 316.85 190.42 67.13 56.77 40.19 127.40 82.50 208.85 209.59 40.15 50.29 237.90 354.91 153.74 170.58 210.29 146.43 91.42 141.87 75.04 110.90 37 E6_Da KnownBoundary 0 46.75 33.02 178.94 127.92 95.93 64.45 22.92 70.48 47.40 137.53 64.07 36.31 19.80 92.59 47.22 60.41 52.36 129.83 85.37 50.94 40.16 37.05 40.55 38 E6_Db KnownBoundary 0 18.89 64.46 139.85 131.29 26.99 31.29 21.68 76.48 36.23 86.23 30.64 25.81 14.28 26.78 68.48 44.01 59.09 88.34 69.65 28.00 41.76 10.53 46.18 39 ER6b ExonRegion 0 44.45 71.18 277.06 214.25 83.48 61.25 30.98 125.31 74.35 185.11 64.17 44.16 51.59 113.36 96.90 82.33 90.11 180.16 122.32 54.26 67.43 45.84 66.07 40 ER6c ExonRegion 0 41.36 58.57 239.55 184.49 45.50 39.17 24.78 106.70 62.38 147.69 35.50 14.97 32.94 88.44 87.43 56.94 47.15 88.29 70.83 51.69 40.90 19.90 57.91 41 E6_Dc NovelBoundary 0 3.70 11.31 52.98 38.02 10.61 33.56 5.70 35.04 27.00 25.89 7.63 0.00 6.82 4.77 9.89 0.00 8.60 33.08 3.58 3.07 5.68 5.45 23.47 42 E6c_E7a KnownJunction 0 0.00 10.06 14.69 6.56 0.00 0.00 0.00 5.87 5.61 18.53 2.47 0.00 6.82 0.00 0.00 3.50 0.00 1.78 0.00 5.75 0.00 0.00 3.24 43 E6_Dd NovelBoundary 0 17.48 82.75 12.45 8.12 24.96 60.02 23.41 4.03 8.13 10.58 20.48 6.30 0.00 17.54 27.20 29.05 16.74 26.45 27.11 12.59 18.10 21.00 49.85 44 E6d_E7b KnownJunction 0 10.30 3.35 11.65 4.93 0.00 0.00 0.00 0.00 0.00 4.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.80 0.00 0.00 0.00 0.00 0.00 45 ER6d ExonRegion 0 5.93 6.51 28.43 10.90 4.28 1.47 3.97 6.22 4.94 12.39 0.00 0.00 0.94 2.92 2.90 6.54 3.30 5.54 0.00 2.98 3.09 0.00 2.94 46 E7_Aa NovelBoundary 1 971.51 677.91 1453.23 1198.75 791.51 491.93 788.39 1265.94 1207.22 1013.64 243.59 95.58 175.48 80.76 314.24 735.36 709.68 1051.38 441.71 683.79 384.50 275.18 689.82 47 ER7a ExonRegion 0 9.52 9.15 22.87 17.49 4.46 4.28 2.43 4.61 4.12 17.20 1.93 4.33 9.38 0.54 1.45 1.98 3.30 5.54 5.31 3.19 2.57 2.08 0.49 48 ER7b ExonRegion 0 13.21 23.57 31.99 24.18 13.55 12.30 5.24 19.83 7.62 22.29 8.09 13.68 16.21 18.66 16.03 6.13 14.35 16.88 20.08 8.42 8.76 7.01 9.02 49 ER7c ExonRegion 0 2.29 9.15 5.51 6.93 4.01 1.68 0.77 4.03 0.21 5.73 0.00 3.97 0.78 10.15 8.46 0.00 4.40 1.39 2.39 5.67 2.39 0.35 3.43