Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PCYT1B Gene 0 8.11 34.83 49.94 14.86 14.18 13.06 14.58 14.90 24.57 28.77 0.71 1.52 4.69 1.26 3.51 1.83 1.18 50.75 61.22 30.88 5.69 10.96 12.44 2 379145 Transcript 0 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 3 379144 Transcript 0 2.38 11.22 13.51 0.26 7.38 13.79 6.67 3.06 3.17 7.14 0.00 0.00 4.63 0.00 1.32 0.00 2.09 94.19 277.85 17.08 3.71 3.69 24.05 4 356768 Transcript 0 0.00 0.00 3.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 496020 Transcript 0 0.00 0.00 3.13 0.00 0.00 0.00 1.77 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 0.00 2.41 0.00 0.00 6 379139 Transcript 0 0.00 0.00 0.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 492876 Transcript 0 2.47 5.76 6.74 2.27 2.68 2.45 1.99 1.73 3.91 4.97 0.00 0.00 0.78 0.00 0.00 0.00 0.00 13.86 11.68 7.09 2.20 1.74 1.47 8 ER1a ExonRegion 0 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.09 0.00 0.00 0.00 0.00 9 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E2_Aa NovelBoundary 0 2.82 14.60 2.72 1.93 10.61 17.66 13.96 2.18 6.31 5.91 0.00 0.00 7.79 0.00 0.00 0.00 0.00 26.24 48.19 8.50 0.00 0.00 4.18 11 ER2a ExonRegion 0 2.38 11.22 13.51 0.26 7.38 13.79 6.67 3.06 3.17 7.14 0.00 0.00 4.63 0.00 1.32 0.00 2.09 94.19 277.85 17.08 3.71 3.69 24.05 12 E2_Ab KnownBoundary 0 14.67 21.64 35.19 3.56 24.53 47.81 25.66 9.53 10.39 19.58 0.00 0.00 6.17 0.00 0.00 0.00 0.00 215.27 709.95 27.10 3.03 19.47 66.07 13 ER2b ExonRegion 0 4.29 14.03 22.82 4.10 6.51 10.25 7.06 6.94 12.51 20.99 0.00 0.00 2.97 0.00 0.24 0.00 0.03 110.19 132.86 31.45 2.66 9.08 15.22 14 E2_Ac KnownBoundary 0 3.78 17.04 31.28 7.33 0.00 17.38 5.61 9.61 13.14 24.28 0.00 0.00 21.10 0.00 4.45 0.00 0.00 83.40 189.46 36.62 3.15 0.00 8.28 15 ER2c ExonRegion 0 2.85 37.85 37.34 9.57 3.49 19.35 9.02 7.97 18.80 22.77 0.00 0.00 6.80 0.00 1.54 0.00 0.00 80.40 243.71 37.43 5.98 14.50 21.28 16 E2a_E4a KnownJunction 0 6.52 32.89 49.23 16.28 4.07 18.68 8.57 6.12 29.08 24.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 111.10 272.48 45.70 8.53 26.02 35.00 17 E2a_E5a NovelJunction 0 0.00 3.29 0.00 0.00 0.00 0.00 2.03 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.63 18.92 0.00 5.50 0.00 3.93 18 ER3a ExonRegion 0 0.00 0.00 0.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER4a ExonRegion 0 2.16 10.64 40.27 13.56 17.47 21.16 11.60 8.75 19.19 29.09 0.00 0.00 10.97 0.00 1.04 0.00 0.00 64.76 76.16 39.38 3.68 8.56 13.71 20 E4a_E5a KnownJunction 0 3.04 12.10 27.56 12.79 44.48 23.79 19.03 11.42 15.45 19.82 0.00 0.00 6.82 0.00 0.00 0.00 0.00 99.20 36.90 28.89 8.09 2.57 3.24 21 ER5a ExonRegion 0 3.84 18.74 33.19 16.35 14.61 15.16 11.83 8.54 24.64 26.59 0.00 0.00 3.85 0.00 0.89 0.00 0.00 84.81 57.80 38.04 9.59 9.33 11.14 22 E5a_E6b KnownJunction 0 14.67 57.88 49.79 15.88 18.51 19.87 16.78 12.40 23.18 28.07 0.00 0.00 6.49 0.00 0.00 0.00 0.00 85.06 69.08 44.23 15.51 13.96 12.46 23 ER6a ExonRegion 0 4.94 11.52 13.48 4.54 5.35 4.89 3.97 3.46 7.82 9.94 0.00 0.00 1.56 0.00 0.00 0.00 0.00 27.72 23.36 14.18 4.41 3.47 2.94 24 ER6b ExonRegion 0 6.36 27.47 32.05 12.85 7.69 8.40 12.04 11.54 25.60 24.25 0.00 0.00 6.77 0.00 0.00 0.00 0.00 80.30 61.18 40.23 6.54 10.22 11.69 25 E6a_E7a KnownJunction 0 0.00 31.18 53.31 12.19 9.93 17.09 6.14 15.57 25.58 23.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70.01 35.30 25.44 8.40 12.00 15.96 26 E6a_E8a KnownJunction 0 0.00 0.00 3.13 0.00 0.00 0.00 1.77 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 0.00 2.41 0.00 0.00 27 ER7a ExonRegion 0 2.84 26.39 40.55 10.51 10.23 7.52 5.78 15.40 26.33 27.37 0.00 0.00 4.99 0.00 0.00 0.00 0.00 60.06 49.51 39.86 7.95 11.68 20.74 28 E7a_E8a KnownJunction 0 0.00 38.28 41.78 16.68 8.23 8.69 5.96 13.84 29.98 31.67 0.00 0.00 12.99 0.00 0.00 0.00 0.00 38.22 39.34 41.29 2.29 19.96 7.51 29 ER8a ExonRegion 0 5.09 41.16 56.85 15.42 9.94 5.53 10.02 12.58 26.23 30.26 0.00 0.00 8.49 0.00 0.73 0.00 0.00 40.39 58.18 33.54 4.13 11.92 15.83 30 E8_Da NovelBoundary 0 0.00 2.76 15.17 1.96 0.00 0.00 0.00 0.00 0.00 3.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 3.26 0.00 0.00 0.00 31 E8a_E9a KnownJunction 0 3.78 48.28 67.95 16.81 4.33 8.46 24.51 20.09 23.21 43.70 0.00 0.00 21.59 0.00 0.00 0.00 0.00 56.21 52.99 22.75 8.22 14.21 31.41 32 ER9a ExonRegion 0 4.67 30.28 58.32 20.49 7.55 13.74 15.80 12.25 27.22 42.14 0.02 0.00 5.68 0.00 0.55 0.00 0.00 48.08 72.27 40.62 4.21 13.65 13.72 33 E9a_E10a KnownJunction 0 0.00 38.55 35.84 16.05 0.00 13.63 10.73 9.61 19.85 27.59 0.00 0.00 6.33 0.00 0.00 0.00 0.00 41.62 45.08 30.23 2.41 8.51 0.00 34 E9a_E10c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER10a ExonRegion 0 3.33 51.10 39.93 13.67 4.71 8.18 6.75 7.93 21.35 30.24 1.50 0.00 8.78 0.00 0.00 0.00 0.00 47.60 33.52 34.35 5.18 11.61 9.00 36 E10_Da KnownBoundary 0 7.33 46.44 47.78 13.82 21.65 5.45 0.00 10.76 23.93 29.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.94 29.55 17.77 2.35 11.02 16.05 37 E10a_E10b KnownJunction 0 0.00 0.00 3.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER10b ExonRegion 0 4.94 30.31 32.09 10.87 9.75 6.24 7.19 5.27 28.05 32.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61.33 49.52 31.97 3.52 12.95 9.09 39 E10_Db KnownBoundary 0 7.48 29.40 19.34 10.22 0.00 14.37 7.73 0.00 20.57 33.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63.42 77.37 42.63 2.59 10.90 3.33 40 ER10c ExonRegion 0 3.85 14.56 30.60 8.24 4.81 9.03 8.80 6.68 17.24 21.77 0.00 0.00 2.77 0.00 0.00 0.00 0.00 67.92 51.34 25.91 4.07 12.85 12.82 41 E10_Ab KnownBoundary 0 0.00 9.21 40.42 14.88 3.14 8.23 9.36 16.02 20.31 29.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 84.32 31.06 35.15 15.14 7.78 17.16 42 ER10d ExonRegion 0 2.44 15.67 37.11 8.61 7.86 7.58 5.80 11.91 27.58 23.11 0.00 0.00 3.34 0.00 0.00 0.00 0.00 95.16 73.82 30.95 9.25 21.46 16.71 43 E10_Ac KnownBoundary 0 3.78 14.54 23.27 8.06 4.24 2.10 7.33 6.65 22.68 15.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53.18 13.46 16.94 6.12 7.72 7.60 44 ER10e ExonRegion 0 5.56 25.68 27.99 5.30 8.52 18.91 6.61 6.66 18.73 22.15 0.00 1.03 0.58 0.00 0.00 0.00 0.00 57.55 45.88 26.74 5.52 15.42 9.14 45 E10_Dc KnownBoundary 0 0.00 5.66 14.52 1.60 6.62 0.00 4.42 4.44 8.36 7.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.53 15.72 12.34 2.66 0.00 3.84 46 E10_Dd KnownBoundary 0 0.00 6.05 14.93 3.66 4.33 0.00 7.15 6.61 13.14 9.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.27 12.89 8.95 2.72 2.94 0.00 47 ER10f ExonRegion 0 0.00 16.27 25.73 9.54 10.70 9.17 10.59 8.64 23.47 20.64 0.00 4.33 4.69 0.00 0.00 0.00 0.00 57.28 54.15 31.91 4.41 16.67 5.87 48 ER10g ExonRegion 0 10.20 41.09 57.30 17.00 17.24 14.31 17.35 17.87 26.68 30.88 1.03 2.22 4.74 1.86 5.03 2.71 1.71 43.19 54.54 30.83 5.98 10.64 11.99 49 IG9_AR6 ActiveIntergenicRegion 0 70.89 40.49 39.83 38.38 64.15 27.51 37.23 36.57 27.16 28.50 43.79 51.22 39.13 22.43 25.69 26.09 35.24 16.28 11.86 14.65 5.24 55.49 57.37 50 IG9_SR3 SilentIntergenicRegion 0 7.46 11.95 8.43 8.62 17.49 14.80 23.03 12.98 18.01 15.36 42.83 51.66 42.24 23.33 6.83 31.10 43.66 24.80 12.64 15.55 8.88 38.13 73.97 51 IG9_AR5 ActiveIntergenicRegion 0 8.17 19.17 10.11 15.04 17.69 19.41 29.89 17.44 22.45 19.35 42.78 56.04 49.31 20.63 4.04 26.19 32.35 13.52 6.51 24.16 6.92 41.49 48.04 52 IG9_AR4 ActiveIntergenicRegion 0 2.98 13.56 7.61 9.05 15.47 11.54 13.61 9.95 13.93 13.73 33.26 35.81 27.44 19.87 6.99 24.82 36.89 24.61 5.96 15.63 7.20 25.05 50.00 53 IG9_SR2 SilentIntergenicRegion 0 5.77 8.55 9.58 9.84 7.64 6.98 14.99 8.18 15.67 9.66 25.09 34.50 28.41 15.16 5.30 18.92 34.38 12.98 7.00 15.30 6.09 22.39 41.73 54 IG9_AR3 ActiveIntergenicRegion 0 6.13 2.73 8.79 7.00 9.99 3.74 12.40 8.35 14.95 9.04 14.50 23.78 25.77 13.32 6.02 14.40 39.99 7.48 8.47 10.51 3.48 16.33 25.81 55 IG9_SR1 SilentIntergenicRegion 0 1.86 2.43 10.00 12.97 23.94 6.05 19.65 11.62 19.68 8.88 21.98 53.73 56.17 15.51 9.69 14.04 32.36 3.62 8.30 13.47 1.32 27.37 32.29 56 IG9_AR2 ActiveIntergenicRegion 0 5.88 3.16 8.92 11.36 18.73 16.61 32.80 11.72 13.45 3.44 22.44 56.76 76.60 14.17 5.48 9.74 25.86 5.95 5.13 10.28 0.00 25.35 16.15 57 IG9_AR1 ActiveIntergenicRegion 0 7.18 6.82 6.89 9.73 8.39 4.62 14.06 6.58 12.96 5.74 19.29 40.67 51.92 15.05 7.72 12.67 20.56 4.84 2.14 10.56 1.14 19.06 21.15