Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SCML2 Gene 0 10.97 56.80 52.45 55.89 32.89 28.35 63.86 26.78 17.20 48.94 34.24 2.08 12.49 5.24 3.11 2.77 1.89 56.78 35.02 57.01 7.22 10.09 8.69 2 251900 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 442000 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 398048 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 420857 Transcript 0 1.06 16.78 6.74 10.90 6.69 7.79 17.54 7.35 2.78 9.46 11.11 0.00 7.04 1.62 0.00 0.00 0.00 24.94 14.33 21.81 6.06 1.04 4.40 6 491988 Transcript 0 0.00 2.57 0.00 1.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.00 0.00 0.35 0.00 1.53 0.00 3.97 0.00 0.00 0.00 1.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1c ExonRegion 0 1.21 29.80 14.80 15.86 22.25 11.21 54.89 2.33 5.27 12.98 15.38 0.00 0.00 0.93 0.00 0.00 0.00 22.73 20.22 46.81 2.10 1.26 0.00 12 E1a_E2a KnownJunction 0 0.00 12.96 4.76 19.91 19.27 2.73 44.87 2.55 12.36 1.67 12.85 0.00 0.00 0.00 0.00 0.00 0.00 21.89 14.02 24.10 2.97 0.00 0.00 13 ER2a ExonRegion 0 0.00 5.22 6.61 17.81 5.58 0.76 12.75 6.65 10.69 8.53 15.76 0.00 5.40 0.00 0.00 0.00 0.00 23.74 8.73 23.96 4.65 5.48 1.02 14 E2a_E3a KnownJunction 0 0.00 12.83 6.18 14.62 4.33 0.00 0.00 10.10 10.62 17.03 41.27 0.00 6.17 0.00 0.00 0.00 0.00 9.08 12.52 47.36 8.53 9.37 4.01 15 ER3a ExonRegion 0 0.00 11.23 20.42 31.52 2.60 2.42 5.24 16.86 16.20 34.36 60.70 0.00 11.28 6.12 0.00 2.89 0.00 63.89 32.96 118.25 9.96 7.01 6.26 16 E3a_E4a KnownJunction 0 0.00 14.54 33.29 46.21 3.57 5.79 9.85 15.32 21.12 45.64 22.37 0.00 14.77 4.94 0.00 7.95 0.00 120.59 65.98 113.26 3.15 5.63 15.54 17 ER4a ExonRegion 0 0.57 13.29 21.30 36.76 7.24 9.27 19.08 8.96 19.01 41.03 28.45 0.00 8.46 2.01 0.00 1.47 0.00 138.24 41.50 91.97 10.40 5.52 8.07 18 E4a_E5a KnownJunction 0 3.70 13.68 12.57 31.76 32.68 23.57 55.38 4.44 13.72 43.44 34.06 0.00 14.77 4.94 0.00 0.00 0.00 96.30 24.85 56.50 14.70 8.45 7.85 19 ER5a ExonRegion 0 3.85 42.24 19.40 23.81 17.58 14.82 58.67 17.09 14.81 44.36 40.91 0.00 6.01 2.26 0.00 0.00 1.43 65.61 26.15 63.10 13.20 8.43 3.81 20 E5a_E6a KnownJunction 0 3.19 29.27 6.92 20.48 20.20 29.19 30.21 6.28 17.94 49.29 38.69 0.00 5.84 0.00 0.00 0.00 0.00 40.87 24.75 65.20 2.35 17.51 0.00 21 ER6a ExonRegion 0 3.35 29.41 11.50 39.40 24.59 22.50 47.93 32.61 13.75 42.31 48.15 0.00 13.39 3.59 0.00 0.00 0.00 58.96 43.74 65.46 11.76 10.18 6.53 22 E6a_E7a KnownJunction 0 3.78 51.96 21.64 38.39 15.11 11.19 39.44 38.57 9.84 37.58 34.54 0.00 27.76 4.89 0.00 0.00 0.00 77.52 52.43 42.31 11.06 5.02 0.00 23 ER7a ExonRegion 0 4.17 53.83 29.99 49.94 30.77 26.63 59.95 34.97 19.99 48.33 50.52 0.99 15.24 6.22 0.00 0.00 0.00 93.50 78.85 76.21 7.69 14.00 16.03 24 E7a_E8a KnownJunction 0 10.37 36.31 51.21 82.81 31.32 13.57 59.31 28.26 13.34 64.68 66.86 12.60 27.60 7.24 0.00 0.00 0.00 73.41 30.12 102.08 8.77 13.10 23.90 25 ER8a ExonRegion 0 3.58 43.70 46.47 61.70 22.45 29.04 64.06 22.49 19.43 49.62 42.56 2.22 13.30 5.82 0.00 0.00 0.00 74.65 37.14 76.21 9.06 14.14 11.64 26 E8a_E9a KnownJunction 0 3.04 61.96 56.21 56.00 27.84 47.30 64.83 20.74 21.82 63.85 47.12 0.00 13.80 9.54 0.00 0.00 0.00 94.14 33.51 77.92 23.23 31.47 19.55 27 ER9a ExonRegion 0 2.76 39.51 30.71 44.78 11.63 29.30 53.19 13.33 20.71 47.10 40.62 0.00 9.81 4.58 0.00 0.81 0.00 113.64 33.14 68.61 11.55 9.07 7.26 28 E9a_E10a KnownJunction 0 9.78 49.00 34.68 55.30 27.33 19.87 87.09 14.25 21.24 50.04 44.27 0.00 13.64 4.83 0.00 4.19 0.00 108.98 25.41 95.68 19.77 2.88 11.01 29 ER10a ExonRegion 0 3.79 26.56 39.03 42.94 27.16 27.36 59.59 12.38 17.19 45.47 43.93 0.00 11.59 4.76 0.00 0.71 0.40 125.57 33.81 75.09 13.25 11.53 7.92 30 E10a_E11a KnownJunction 0 17.63 48.15 65.14 61.66 15.96 42.48 51.10 18.36 22.51 60.55 73.54 0.00 7.30 4.89 0.00 4.36 4.77 141.31 63.15 81.69 13.71 15.37 14.68 31 ER11a ExonRegion 0 4.75 43.67 29.82 51.60 30.37 34.38 64.14 18.62 13.01 46.23 50.86 0.99 13.84 3.64 0.00 1.98 2.31 110.77 28.69 78.28 16.29 9.46 11.14 32 E11a_E12b KnownJunction 0 3.78 70.65 28.03 49.44 31.24 45.26 101.97 27.56 12.59 39.89 47.43 0.00 42.37 4.59 0.00 0.00 0.00 97.58 69.08 88.46 27.99 2.69 10.93 33 ER12a ExonRegion 0 1.06 16.78 6.74 10.90 6.69 7.79 17.54 7.35 2.78 9.46 11.11 0.00 7.04 1.62 0.00 0.00 0.00 24.94 14.33 21.81 6.06 1.04 4.40 34 ER12b ExonRegion 0 6.42 37.58 35.63 45.42 25.31 27.64 66.99 21.69 9.91 47.64 54.38 0.00 15.36 4.34 0.00 2.39 0.00 110.59 39.66 74.35 12.36 4.48 11.51 35 E12a_E13a KnownJunction 0 3.19 28.55 49.79 42.65 4.33 27.37 72.69 26.99 3.59 51.23 34.17 0.00 6.82 2.41 0.00 8.72 0.00 90.29 61.46 63.60 5.99 5.33 0.00 36 ER13a ExonRegion 0 9.36 46.87 57.36 47.42 39.24 40.92 72.28 27.93 13.65 55.95 51.44 0.72 12.99 4.25 0.00 1.33 0.00 94.68 64.92 69.85 10.70 6.15 9.74 37 E13_Da NovelBoundary 0 16.52 6.45 9.08 20.31 11.80 0.00 20.05 6.24 6.94 9.08 2.47 0.00 14.45 0.00 0.00 0.00 0.00 14.26 4.24 11.76 5.99 0.00 4.18 38 E13a_E14a KnownJunction 0 20.23 6.38 20.67 7.26 16.72 16.41 49.90 4.39 6.94 13.05 33.27 0.00 14.93 4.94 0.00 0.00 0.00 19.65 15.06 35.73 0.00 2.82 12.89 39 E13a_E15a KnownJunction 0 2.96 33.94 35.45 9.36 23.60 28.28 28.97 17.29 7.41 13.32 7.16 0.00 0.00 0.00 0.00 0.00 0.00 23.63 28.99 21.28 0.00 2.45 0.00 40 I13 Intron 0 2.85 9.75 11.64 25.52 6.07 4.88 13.68 5.29 4.20 6.09 4.86 0.41 2.85 0.41 0.00 0.00 0.00 9.90 7.32 10.66 1.34 1.85 1.35 41 I13_SR1 SilentIntronRegion 0 2.85 9.76 11.64 25.54 6.07 4.88 13.69 5.29 4.20 6.10 4.86 0.41 2.86 0.41 0.00 0.00 0.00 9.91 7.33 10.66 1.34 1.85 1.35 42 E14_Aa NovelBoundary 0 0.00 3.35 12.63 29.63 0.00 2.84 18.68 3.41 5.47 12.11 2.05 0.00 0.00 2.41 0.00 0.00 0.00 6.63 14.31 11.95 0.00 3.12 0.00 43 ER14a ExonRegion 0 10.39 18.18 27.93 36.95 22.29 11.45 58.19 5.66 11.55 21.51 35.67 1.94 8.39 3.60 0.00 0.00 0.17 31.90 25.80 34.63 6.57 7.02 6.59 44 E14_Da NovelBoundary 0 6.52 14.14 7.27 27.10 0.00 14.76 21.68 6.90 3.21 12.79 2.16 0.00 0.00 2.47 0.00 0.00 0.00 9.24 9.60 8.56 6.18 5.51 0.00 45 E14a_E15a KnownJunction 0 0.00 5.46 21.70 29.73 12.05 9.65 88.28 2.51 12.27 18.59 37.64 7.65 0.00 0.00 0.00 0.00 3.65 8.46 15.62 36.11 5.99 4.78 7.34 46 I14 Intron 0 4.28 19.20 11.08 30.71 7.73 9.54 16.64 7.19 4.70 8.31 3.82 0.00 2.92 0.52 0.00 0.29 0.00 12.44 6.60 9.12 1.80 1.91 1.27 47 I14_SR1 SilentIntronRegion 0 4.31 14.98 11.05 28.98 4.69 10.36 16.80 6.27 2.89 7.80 4.39 0.00 0.00 0.59 0.00 0.00 0.00 22.81 10.53 9.43 2.90 1.52 1.83 48 I14_AR1 ActiveIntronRegion 0 4.34 21.33 10.89 34.69 9.58 9.59 17.49 8.39 5.85 9.46 3.70 0.00 4.42 0.46 0.00 0.51 0.00 8.34 4.80 9.81 1.31 2.01 1.18 49 I14_SR2 SilentIntronRegion 0 4.13 29.22 17.85 22.62 10.49 3.73 16.44 5.02 5.98 5.42 2.90 0.00 7.26 1.10 0.00 0.00 0.00 2.98 6.47 3.67 1.81 3.26 0.00 50 I14_AR2 ActiveIntronRegion 0 4.76 25.93 13.79 8.86 8.70 12.84 15.56 3.46 4.79 3.30 5.07 0.00 0.00 0.00 0.00 0.00 0.00 1.85 3.19 6.38 0.00 4.17 0.00 51 I14_AR3 ActiveIntronRegion 0 4.23 19.75 8.40 8.18 2.68 12.84 8.32 3.46 2.47 2.29 3.87 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.91 6.38 0.00 3.87 0.00 52 E15_Aa NovelBoundary 0 2.96 11.38 9.79 28.07 7.81 38.05 19.30 2.01 8.16 8.97 2.16 0.00 0.00 0.00 0.00 0.00 0.00 4.48 7.34 12.14 2.90 0.00 0.00 53 ER15a ExonRegion 0 7.68 52.62 52.63 52.37 41.82 29.85 72.80 25.99 21.19 46.87 38.94 0.84 20.29 1.99 0.00 1.29 2.69 60.47 54.79 61.78 5.30 11.65 9.52 54 E15_Da KnownBoundary 0 10.30 46.24 53.04 66.19 47.88 22.32 74.50 50.97 11.89 40.27 27.53 0.00 12.50 4.94 0.00 0.00 0.00 64.42 105.70 63.15 6.12 8.51 12.38 55 E15_Ab KnownBoundary 0 0.00 21.97 46.66 81.31 39.30 37.25 99.76 21.44 19.88 57.30 44.43 6.45 6.82 2.12 0.00 4.36 7.85 52.07 60.52 58.80 3.09 11.02 4.27 56 ER15b ExonRegion 0 4.40 34.10 61.32 95.51 46.93 37.88 84.33 42.75 20.85 67.23 44.31 2.16 5.77 5.12 0.00 2.97 4.32 85.57 97.77 71.44 6.19 10.98 10.28 57 ER15c ExonRegion 0 10.41 37.77 43.18 57.27 30.75 37.85 76.28 22.46 17.26 50.97 33.09 1.63 11.99 5.13 0.03 0.28 0.89 34.67 31.36 46.32 5.96 8.59 2.01 58 E15_Db KnownBoundary 0 6.96 24.01 49.53 56.14 47.96 16.01 72.12 25.14 8.39 50.98 33.22 0.00 6.82 7.06 0.00 0.00 0.00 27.86 13.74 50.49 5.31 11.45 3.16 59 E15b_E15c KnownJunction 0 0.00 2.57 0.00 1.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 ER15d ExonRegion 0 12.51 98.22 73.49 73.29 44.84 34.45 75.72 33.77 20.56 58.70 21.98 2.15 12.98 4.29 1.80 1.18 0.93 20.88 20.75 42.55 1.83 10.98 5.26 61 E15_Ac KnownBoundary 0 345.47 426.11 221.13 232.97 411.46 283.25 873.36 238.72 216.40 206.17 198.31 156.05 180.02 104.54 202.98 387.59 282.75 170.66 296.38 437.83 171.06 140.84 306.45 62 ER15e ExonRegion 0 32.73 74.02 98.38 80.24 47.32 33.01 72.27 45.92 20.02 60.30 27.45 7.48 17.72 12.35 18.87 14.54 9.20 36.48 39.74 51.08 7.25 13.97 18.37 63 E15_Dc KnownBoundary 0 51.42 57.69 120.04 89.47 4.33 16.58 19.74 38.08 33.30 47.98 46.43 86.73 102.10 47.85 87.03 11.62 26.93 3.44 17.32 23.46 0.00 31.11 7.17 64 ER15f ExonRegion 0 8.73 8.59 14.53 27.74 3.96 3.62 6.12 8.18 3.24 10.16 1.74 2.56 0.00 2.88 0.00 0.00 0.00 0.00 1.44 7.10 0.00 2.99 0.00