Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ASB9 Gene 0 6.25 3.11 4.84 4.55 6.40 2.38 1.96 3.54 5.30 2.61 0.34 1.11 3.86 20.44 8.37 1.44 15.30 6.01 1.62 2.44 5.49 2.28 3.07 2 470015 Transcript 0 2.42 1.68 0.83 0.98 3.74 1.36 1.10 3.10 2.98 2.97 0.00 0.00 0.00 1.24 4.18 2.09 18.53 10.23 0.00 6.04 5.42 1.22 4.77 3 380488 Transcript 0 0.73 0.53 0.85 0.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 6.75 2.35 0.00 1.14 0.00 0.00 0.00 0.00 0.00 2.73 4 380485 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 380483 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 473862 Transcript 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 481384 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 484017 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 477346 Transcript 0 1.40 0.63 2.44 6.13 0.87 2.38 2.15 4.29 6.75 5.16 1.82 4.83 6.46 4.07 3.04 2.89 2.14 7.37 5.89 7.62 0.00 0.00 4.94 10 ER1a ExonRegion 0 1.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 0.00 7.98 0.15 0.00 0.00 2.75 0.00 2.45 11 E1a_E1f KnownJunction 0 3.26 3.35 1.66 1.96 7.47 2.73 2.21 6.20 5.96 5.94 0.00 0.00 0.00 2.47 6.18 4.19 29.08 20.31 0.00 12.08 8.09 2.45 7.09 12 ER1b ExonRegion 0 2.92 1.96 1.06 0.00 3.04 1.71 0.87 2.15 1.11 2.06 0.00 0.00 0.00 1.62 7.30 0.00 17.07 8.54 0.00 4.18 5.09 0.65 4.35 13 ER1c ExonRegion 0 0.73 0.53 0.85 0.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 6.75 2.35 0.00 1.14 0.00 0.00 0.00 0.00 0.00 2.73 14 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.71 15 E1_Ad KnownBoundary 0 7.48 3.35 3.55 2.06 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.66 4.45 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 16 ER1d ExonRegion 0 2.12 2.03 2.45 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.69 32.64 8.70 0.00 5.28 0.00 0.00 0.00 0.00 0.00 5.87 17 ER1e ExonRegion 0 1.28 1.39 2.45 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.97 27.40 4.58 0.00 12.68 0.00 0.00 0.00 1.28 0.00 2.16 18 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.30 0.00 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 19 E1_Af KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.59 0.00 0.00 13.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER1f ExonRegion 0 5.29 0.51 2.76 0.34 2.01 0.92 0.33 0.86 0.62 0.57 0.00 0.00 0.00 11.37 10.15 0.00 28.06 3.23 0.00 2.13 6.06 0.52 2.20 21 ER1g ExonRegion 0 6.54 6.44 7.94 6.36 8.07 6.86 2.85 4.90 13.63 9.47 1.73 0.97 0.86 21.96 14.20 7.98 26.18 43.24 7.13 8.47 8.06 2.70 7.70 22 E1b_E2c KnownJunction 0 3.56 5.66 10.53 14.18 8.57 8.57 2.08 8.42 17.16 20.07 2.68 0.00 0.00 26.31 8.90 12.56 28.05 49.83 4.05 21.67 3.15 0.00 8.28 23 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER2b ExonRegion 0 0.00 0.14 0.08 0.09 0.18 0.19 0.00 0.00 0.04 0.08 0.00 0.00 0.00 0.90 0.40 0.00 0.57 0.00 0.00 0.00 0.15 0.00 0.20 27 ER2c ExonRegion 0 0.00 0.31 2.33 1.28 9.42 4.50 0.00 0.00 1.70 0.77 0.00 0.00 0.00 25.27 11.05 0.00 25.07 0.00 4.11 0.00 6.61 1.35 2.16 28 E2a_E3a KnownJunction 0 0.00 3.35 10.02 9.32 6.20 11.58 0.00 11.58 27.60 16.49 2.68 0.00 0.00 21.43 10.75 4.19 40.11 72.79 4.61 9.46 8.71 3.00 4.18 29 ER3a ExonRegion 0 4.02 0.00 3.91 1.47 4.38 4.49 1.24 2.46 1.11 0.86 0.00 0.00 0.00 32.12 8.89 0.00 24.76 0.00 0.00 0.00 11.57 1.33 2.31 30 E3a_E4a KnownJunction 0 12.89 15.46 16.11 23.84 7.13 8.12 10.78 15.07 9.55 20.87 2.53 0.00 0.00 39.97 9.27 32.04 18.23 80.59 0.00 14.19 10.50 11.39 15.37 31 E3a_E4b KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER3b ExonRegion 0 10.88 0.00 4.33 2.53 3.63 0.00 2.32 1.73 2.96 0.00 0.00 0.00 0.00 47.10 5.80 0.00 19.22 0.00 0.00 0.00 8.81 4.61 4.30 33 ER4a ExonRegion 0 8.73 1.13 4.53 1.92 1.46 0.88 0.98 1.55 1.92 0.44 0.00 0.00 0.00 31.43 6.23 0.00 20.52 0.00 0.14 0.00 14.05 3.36 1.64 34 E4_Ab KnownBoundary 0 13.41 0.00 7.01 6.76 0.00 10.56 7.95 8.38 6.60 2.79 0.00 0.00 6.66 20.25 16.32 0.00 33.47 5.22 3.67 2.68 23.60 0.00 0.00 35 ER4b ExonRegion 0 5.95 0.06 4.88 2.10 3.27 5.04 1.39 2.44 3.35 0.76 0.00 0.00 3.20 26.48 5.57 0.00 14.09 0.00 2.38 0.00 11.30 1.46 1.72 36 E4_Da NovelBoundary 0 3.78 0.00 0.00 1.40 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 10.42 0.00 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 37 E4a_E5a KnownJunction 0 34.08 14.67 14.61 22.41 3.99 8.52 1.81 3.94 16.26 20.42 0.00 5.85 8.28 26.43 15.58 12.56 7.39 46.22 0.00 14.64 7.48 5.08 7.94 38 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E5_Ab NovelBoundary 0 6.96 6.71 4.35 8.26 0.00 0.00 0.00 5.09 8.42 4.97 0.00 0.00 8.28 7.95 4.94 0.00 13.18 12.85 0.00 0.00 2.47 0.00 0.00 40 ER5a ExonRegion 0 15.84 4.07 6.28 0.92 7.51 5.38 0.73 1.73 4.94 0.00 0.00 0.00 4.69 22.21 8.98 0.00 10.33 0.00 0.00 0.00 4.62 1.75 2.27 41 E5_Da KnownBoundary 0 7.04 0.00 3.61 6.09 8.06 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 22.37 10.26 0.00 0.00 12.64 0.00 0.00 5.56 3.12 6.83 42 ER5b ExonRegion 0 16.93 4.07 6.13 0.00 8.03 0.00 1.32 1.73 4.94 0.00 0.00 0.00 4.69 36.54 17.41 0.00 9.90 0.00 0.00 0.00 6.61 2.08 5.87 43 ER5c ExonRegion 0 7.97 1.08 8.54 2.50 6.42 0.70 2.85 3.54 3.40 0.00 0.00 0.00 4.46 34.16 15.28 0.00 19.92 0.00 0.00 0.00 8.78 0.97 4.36 44 E5_Db KnownBoundary 0 0.00 0.00 9.99 5.29 0.00 0.00 0.00 9.41 4.98 1.53 0.00 0.00 0.00 16.89 5.19 0.00 3.83 7.42 0.00 0.00 10.63 0.00 0.00 45 E5_Dc KnownBoundary 0 7.41 5.99 3.67 14.12 3.90 0.00 10.29 11.30 2.78 15.79 0.00 0.00 0.00 11.83 14.22 7.95 8.60 39.75 4.05 5.75 2.84 6.12 7.68 46 ER5d ExonRegion 0 0.00 0.00 9.80 2.73 2.68 1.83 5.63 5.19 3.71 0.00 0.00 0.00 0.00 39.79 15.96 0.00 14.03 0.00 0.00 0.00 12.67 0.00 2.94 47 ER5e ExonRegion 0 0.94 0.00 10.86 1.29 4.98 1.22 6.73 4.85 3.95 0.00 0.00 0.00 0.00 37.22 13.14 0.00 14.58 0.00 2.92 0.00 10.41 1.79 2.94 48 E5d_E6a KnownJunction 0 9.56 11.77 12.33 4.99 15.28 0.00 5.56 9.16 4.66 7.39 0.00 0.00 0.00 36.08 10.38 7.43 12.81 23.75 4.61 2.81 11.49 3.12 3.16 49 ER6a ExonRegion 0 6.57 2.75 6.93 2.46 7.66 1.46 1.21 3.78 5.44 2.41 0.13 1.01 0.15 29.80 8.28 0.14 20.37 0.65 1.48 0.35 8.45 1.20 1.58 50 E6_Da KnownBoundary 0 0.00 0.00 2.93 1.86 8.32 8.69 0.00 2.55 6.74 3.25 0.00 0.00 0.00 13.24 4.45 0.00 13.84 0.00 0.00 0.00 2.47 2.57 3.67 51 E6a_E7a KnownJunction 0 14.82 10.66 4.88 9.89 27.84 0.00 3.18 2.05 5.41 9.27 0.00 0.00 0.00 10.95 10.75 3.93 20.01 15.96 4.24 10.10 2.90 0.00 0.00 52 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.86 0.00 0.00 0.00 0.00 53 ER6b ExonRegion 0 12.28 1.00 2.49 1.14 4.56 3.43 0.00 4.59 5.47 1.33 0.00 0.00 1.85 21.94 2.81 0.00 16.07 0.00 2.04 0.00 4.73 2.12 0.58 54 E6b_E7a KnownJunction 0 9.78 3.35 1.66 0.00 8.15 0.00 0.00 6.53 4.54 0.00 0.00 0.00 6.82 20.54 0.00 0.00 24.59 0.00 4.05 0.00 15.01 0.00 0.00 55 ER7a ExonRegion 0 12.51 8.63 6.62 9.60 13.77 1.65 2.84 7.26 8.72 3.43 0.00 2.86 6.97 26.61 10.89 1.46 21.05 1.58 0.11 3.70 3.67 4.67 2.25 56 E7_Da KnownBoundary 0 29.49 22.96 16.50 27.90 22.58 0.00 14.71 15.77 16.72 19.93 0.00 6.30 5.84 7.71 22.75 7.52 13.84 10.40 0.00 8.82 2.59 0.00 0.00 57 ER7b ExonRegion 0 4.85 2.07 3.55 6.63 6.39 1.23 3.05 2.61 2.95 1.03 0.00 0.39 10.63 8.65 8.14 0.35 5.39 0.54 0.00 1.21 3.24 3.51 2.91 58 E8_Aa NovelBoundary 0 216.41 144.18 89.74 61.50 113.33 106.70 155.41 59.27 77.20 52.49 37.54 61.82 26.46 22.19 16.56 165.34 93.13 61.93 101.56 125.09 128.87 194.11 208.20 59 ER8a ExonRegion 0 2.80 1.26 4.88 12.27 1.74 4.76 4.29 8.57 13.50 10.32 3.63 9.65 12.93 8.14 6.08 5.78 4.28 14.73 7.92 15.24 0.00 0.00 9.88