Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GYG2 Gene 0 24.28 43.02 109.07 49.93 34.32 7.25 31.83 47.56 24.96 66.43 0.00 0.41 0.62 0.49 0.99 0.07 0.07 39.37 32.05 53.18 8.61 12.28 12.99 2 398806 Transcript 0 0.00 12.70 43.08 17.05 4.24 2.78 14.49 26.37 27.63 57.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.01 50.82 47.87 5.56 13.78 12.63 3 381163 Transcript 0 0.00 0.00 1.83 1.78 0.00 0.00 0.00 0.86 0.00 1.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 2.18 4 381161 Transcript 0 0.00 0.00 4.91 2.00 0.00 0.00 0.00 6.57 1.39 8.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 6.26 2.66 3.12 0.00 5 381157 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 0.00 0.00 0.00 6 469234 Transcript 0 3.30 1.66 1.17 1.70 1.79 0.68 2.88 0.91 0.34 1.90 0.00 2.14 2.32 3.38 6.30 0.83 0.00 0.54 1.09 2.61 1.01 3.36 5.06 7 459965 Transcript 0 0.13 0.87 3.22 1.36 0.81 0.00 1.61 0.78 0.90 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.68 1.74 0.91 0.27 0.00 0.36 8 353656 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 338623 Transcript 0 0.00 0.00 15.97 3.06 0.00 0.00 4.33 14.66 8.51 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.65 3.58 8.50 0.00 3.12 0.00 10 453106 Transcript 0 1.59 8.69 13.25 4.45 6.71 0.04 5.70 9.23 3.21 1.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.97 2.08 8.53 0.00 0.00 3.82 11 ER1a ExonRegion 0 0.00 0.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.14 0.14 1.14 0.00 12 E1_Ab KnownBoundary 0 0.00 6.38 2.63 0.00 0.00 0.00 0.00 0.00 0.00 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 0.00 13 ER1b ExonRegion 0 4.72 5.03 6.99 2.50 2.24 2.47 3.23 2.30 3.16 7.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.03 18.38 5.34 4.05 2.94 2.17 14 E1a_E2a KnownJunction 0 25.49 19.40 21.85 6.49 8.49 8.63 15.46 12.82 10.56 20.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.60 47.15 18.02 11.37 5.57 7.68 15 E2_Aa NovelBoundary 0 3.63 2.83 10.94 1.60 0.00 0.00 4.15 4.76 4.72 13.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 17.69 15.60 0.00 0.00 3.93 16 ER2a ExonRegion 0 9.97 9.72 26.66 7.27 5.47 2.89 13.50 8.68 12.43 27.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.56 27.54 21.32 5.24 9.49 5.42 17 E2_Ab KnownBoundary 0 3.04 5.13 26.02 8.79 3.57 0.00 9.23 14.50 15.19 29.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.26 12.61 19.75 3.15 4.84 4.18 18 ER2b ExonRegion 0 3.41 0.73 25.73 8.14 0.74 4.89 3.02 8.07 13.55 29.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.31 6.37 15.48 6.37 2.84 4.98 19 E2_Ac KnownBoundary 0 10.96 0.00 27.29 5.93 0.00 14.42 2.25 6.37 12.18 26.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.07 0.00 15.79 11.74 5.63 4.01 20 ER2c ExonRegion 0 2.08 6.89 33.40 12.04 1.09 4.28 3.19 16.42 21.11 46.34 0.00 0.00 0.00 0.24 0.27 0.00 0.00 13.69 14.63 30.81 7.92 8.37 9.19 21 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E2a_E5b KnownJunction 0 0.00 0.00 3.67 3.56 0.00 0.00 0.00 0.00 0.00 2.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.14 0.00 0.00 0.00 0.00 4.35 23 E2a_E6b KnownJunction 0 0.00 12.70 43.08 17.05 4.24 2.78 14.49 26.37 27.63 57.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.01 50.82 47.87 5.56 13.78 12.63 24 E2a_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 0.00 0.00 0.00 25 E2a_E8a KnownJunction 0 0.00 0.00 4.91 2.00 0.00 0.00 0.00 6.57 1.39 8.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 6.26 2.66 3.12 0.00 26 ER3a ExonRegion 0 0.26 1.73 6.45 2.72 1.63 0.00 3.23 1.57 1.79 3.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.35 3.49 1.81 0.54 0.00 0.72 27 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E4_Ab NovelBoundary 0 397.33 530.37 1215.98 1449.00 437.35 355.76 754.08 1434.35 1172.93 1219.43 194.37 104.73 96.10 75.05 100.38 374.18 323.89 1129.27 331.40 470.05 241.98 130.67 319.60 29 ER4a ExonRegion 0 7.41 3.39 0.00 2.73 2.68 0.61 3.75 0.00 1.03 4.21 0.00 4.33 4.69 7.58 13.54 2.48 0.00 1.54 2.65 5.32 0.00 10.07 15.17 30 ER4b ExonRegion 0 11.56 5.57 0.00 2.70 2.30 7.76 9.79 1.22 1.68 2.97 0.00 4.81 16.15 8.99 15.31 2.67 3.09 0.79 1.36 10.72 1.04 9.16 25.37 31 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E5_Aa NovelBoundary 0 185.51 180.56 191.98 249.49 201.70 121.41 181.91 200.85 238.02 179.33 77.39 47.57 15.26 22.90 74.05 181.83 195.70 257.84 185.42 172.58 79.69 44.03 124.80 33 E5_Ab NovelBoundary 0 28.89 0.00 68.63 97.19 25.04 11.47 28.66 84.41 83.10 84.48 13.11 0.00 0.00 0.00 0.00 8.20 14.31 83.32 0.00 22.12 6.05 0.00 7.77 34 ER5a ExonRegion 0 0.00 0.00 0.61 0.51 0.00 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.00 1.22 0.36 0.00 0.00 0.69 0.00 0.00 0.00 0.00 0.37 35 ER5b ExonRegion 0 0.00 1.15 0.96 3.64 1.48 0.00 2.20 0.00 0.93 3.18 0.00 1.98 4.28 3.60 8.10 0.00 0.00 2.81 0.00 3.54 0.00 0.00 1.15 36 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 7.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 3.67 37 E6_Ac NovelBoundary 0 3.41 16.05 61.17 27.77 0.00 0.00 16.03 34.30 20.57 43.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.51 21.37 51.13 12.42 19.35 32.44 38 ER6a ExonRegion 0 0.00 2.85 8.82 3.27 0.54 0.37 1.59 4.49 5.43 10.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 7.01 9.36 0.44 2.08 3.52 39 ER6b ExonRegion 0 1.49 11.82 49.38 18.63 2.68 1.83 12.41 25.80 25.75 56.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.69 36.45 50.51 3.75 9.80 21.86 40 ER6c ExonRegion 0 6.78 13.13 59.71 21.89 8.45 0.68 13.91 24.73 25.62 47.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45.19 20.51 43.52 9.24 12.12 14.58 41 E6a_E7a KnownJunction 0 0.00 0.00 9.02 4.03 0.00 0.00 0.00 0.00 0.00 4.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 4.80 0.00 0.00 0.00 0.00 42 E6a_E8a KnownJunction 0 17.48 11.97 85.24 23.67 18.17 7.10 22.08 32.57 30.15 49.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.94 20.14 60.02 5.81 8.45 8.02 43 E7_Aa NovelBoundary 0 383.99 349.74 539.81 607.58 227.59 250.03 502.70 564.81 549.68 451.95 139.88 45.76 127.59 90.18 166.88 293.85 343.62 598.13 265.14 421.98 223.57 164.29 353.32 44 ER7a ExonRegion 0 0.00 1.77 5.06 3.02 3.18 0.00 1.80 2.93 0.80 3.12 0.00 4.66 0.00 1.08 4.24 0.00 0.00 1.69 0.71 1.85 1.00 0.00 1.28 45 E7_Da KnownBoundary 0 0.00 9.67 15.43 0.00 2.97 0.00 7.82 6.16 0.00 6.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 0.00 0.00 2.59 0.00 0.00 46 ER7b ExonRegion 0 2.49 1.60 3.52 2.39 2.71 1.44 4.90 2.73 0.00 1.50 0.00 2.10 2.27 2.55 5.36 0.00 0.00 0.09 0.62 2.50 3.03 0.00 0.00 47 ER8a ExonRegion 0 11.29 27.92 103.55 36.88 21.74 12.47 28.98 60.62 45.46 90.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76.10 49.55 95.98 18.72 26.26 29.29 48 E8_Ab KnownBoundary 0 0.00 53.35 98.78 58.03 11.63 4.94 41.78 76.64 50.95 120.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 90.12 62.78 100.41 22.61 62.40 28.85 49 ER8b ExonRegion 0 5.56 26.65 98.80 40.54 28.35 5.44 23.13 63.71 41.09 95.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70.73 50.69 68.42 19.86 22.03 16.56 50 E8a_E9a KnownJunction 0 20.23 18.35 129.18 48.21 26.99 0.00 29.01 55.20 34.98 111.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 82.20 57.79 59.70 26.75 21.68 23.90 51 ER9a ExonRegion 0 18.81 17.38 117.29 58.04 20.83 3.09 23.44 64.62 37.14 115.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 91.92 64.10 93.67 20.37 27.11 23.78 52 E9a_E10a KnownJunction 0 37.86 20.79 126.40 66.79 38.96 2.90 35.37 51.14 41.70 112.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 79.09 66.17 82.13 13.65 11.63 25.95 53 ER10a ExonRegion 0 21.97 37.60 123.79 63.60 32.07 5.67 31.57 63.19 36.73 109.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.06 46.73 74.99 14.49 18.83 17.43 54 E10a_E11a KnownJunction 0 11.04 46.18 134.71 50.44 39.73 0.00 26.54 59.72 35.59 99.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.69 22.78 62.19 16.93 6.00 23.99 55 ER11a ExonRegion 0 11.18 27.59 104.07 33.72 22.64 4.67 26.63 51.39 27.24 75.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.91 28.20 58.89 9.59 10.83 16.51 56 E11a_E12a KnownJunction 0 7.19 51.44 148.90 36.63 35.06 13.29 22.52 48.39 39.53 64.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64.58 35.11 34.58 10.75 8.45 19.04 57 ER12a ExonRegion 0 16.91 32.55 124.82 43.63 31.42 5.75 22.78 56.33 31.96 83.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73.07 26.12 69.73 12.96 14.28 16.93 58 E12a_E13a KnownJunction 0 22.97 28.48 122.44 48.18 11.63 7.84 26.19 50.73 20.83 66.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.70 23.53 57.85 11.00 11.57 23.56 59 E12a_E15a KnownJunction 0 3.78 19.01 10.97 10.49 3.57 8.29 8.26 13.18 8.56 10.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.48 0.00 12.14 0.00 0.00 0.00 60 E13_Aa NovelBoundary 0 9.85 8.29 43.94 17.91 4.33 2.90 14.93 23.54 2.86 21.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.61 8.38 3.00 0.00 2.63 11.44 61 ER13a ExonRegion 0 26.99 22.31 111.58 46.45 20.57 5.10 24.90 52.53 23.95 86.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.04 26.36 59.27 13.35 17.34 23.35 62 E13_Da NovelBoundary 0 2.82 18.88 15.82 3.50 7.98 2.73 15.15 11.21 5.41 14.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 3.00 0.00 0.00 0.00 63 E13a_E14a KnownJunction 0 23.78 26.84 106.06 40.95 29.03 8.18 22.39 41.07 9.84 57.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.12 29.37 54.27 11.98 17.70 28.68 64 E13a_E15a KnownJunction 0 0.00 0.00 15.97 3.06 0.00 0.00 4.33 14.66 8.51 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.65 3.58 8.50 0.00 3.12 0.00 65 ER14a ExonRegion 0 23.69 26.38 100.49 51.59 30.00 4.38 31.79 41.16 15.21 64.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.77 39.26 49.29 6.31 16.94 14.82 66 E14_Da KnownBoundary 0 0.00 6.58 13.78 19.08 12.56 0.00 6.71 16.59 4.40 10.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.26 22.40 5.69 0.00 2.94 4.27 67 E14a_E15a KnownJunction 0 10.08 9.47 82.29 35.53 11.80 5.68 23.27 53.48 13.72 71.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.84 26.64 34.83 2.78 5.27 4.35 68 ER14b ExonRegion 0 1.59 8.69 13.25 4.45 6.71 0.04 5.70 9.23 3.21 1.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.97 2.08 8.53 0.00 0.00 3.82 69 I14_AR1 ActiveIntronRegion 0 3.94 16.65 12.92 10.58 7.97 0.00 5.42 1.92 4.11 6.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.84 2.37 7.94 0.00 0.00 2.19 70 E15_Aa NovelBoundary 0 0.00 8.68 21.32 13.25 0.00 5.79 3.71 16.31 0.00 9.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.50 0.00 6.01 0.00 2.39 0.00 71 ER15a ExonRegion 0 48.55 88.05 195.16 92.80 67.89 13.80 59.58 80.20 38.97 103.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53.16 51.18 82.22 11.02 17.46 16.71 72 ER15b ExonRegion 0 6.35 3.78 5.95 9.73 9.56 0.00 3.78 4.44 2.47 0.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 9.12 1.57 0.00 2.52 73 ER15c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00