Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MBTPS2 Gene 0 11.36 58.36 53.21 64.96 35.57 50.55 41.17 55.03 66.87 50.13 19.24 50.07 42.26 26.92 20.28 21.36 29.23 31.03 26.17 63.42 28.27 60.80 30.82 2 465888 Transcript 0 0.00 0.00 0.00 0.10 0.00 0.00 0.03 1.09 0.00 0.00 1.56 0.74 0.09 2.78 3.24 0.07 4.84 0.00 0.00 0.00 1.41 4.13 0.07 3 379484 Transcript 0 12.81 68.44 64.64 76.91 52.14 93.63 72.18 83.21 137.82 96.73 44.40 139.93 101.71 61.28 37.41 50.89 74.12 57.38 62.50 147.77 64.40 119.55 85.65 4 365779 Transcript 0 3.97 6.43 6.12 10.33 5.95 3.41 10.68 5.43 3.30 3.74 1.19 7.68 7.54 1.58 2.08 3.96 3.02 2.88 3.07 7.72 1.19 2.07 2.95 5 ER1a ExonRegion 0 1.23 3.21 4.13 5.09 0.00 0.00 1.05 2.09 8.91 11.11 1.32 0.00 0.00 6.92 14.35 0.00 9.03 0.29 3.02 24.52 11.95 2.08 1.85 6 ER1b ExonRegion 0 9.01 27.63 16.35 19.01 7.11 8.29 12.28 14.23 37.04 32.03 16.04 12.32 9.53 17.28 11.87 10.58 33.73 17.94 7.97 60.74 52.38 10.74 11.58 7 E1a_E2a KnownJunction 1 17.19 81.56 32.82 58.57 16.04 11.47 23.49 35.36 91.38 67.45 78.02 12.60 0.00 56.86 20.15 34.35 162.32 81.37 39.44 155.51 173.90 36.86 55.74 8 ER2a ExonRegion 0 4.96 39.46 44.37 89.30 14.85 48.18 28.51 48.26 100.88 69.35 55.68 50.50 41.23 84.48 40.95 86.47 83.43 160.59 74.20 175.47 117.36 119.70 125.41 9 E2a_E3a KnownJunction 0 0.00 43.35 45.00 123.86 36.93 112.89 70.48 58.57 135.27 81.74 82.23 56.42 59.25 65.57 16.32 103.14 108.09 116.98 54.78 175.39 116.08 124.79 62.14 10 ER3a ExonRegion 1 13.17 78.27 34.16 67.53 30.97 44.58 49.54 50.83 87.65 68.46 53.65 75.50 74.67 87.22 26.84 59.12 68.19 66.76 55.39 152.28 91.33 110.21 64.78 11 E3a_E4a KnownJunction 0 31.71 142.67 16.88 70.49 79.20 68.43 78.96 78.66 110.53 108.17 76.34 136.99 180.67 78.76 36.34 116.04 80.69 72.67 62.97 177.82 102.06 138.33 62.32 12 E4_Aa NovelBoundary 0 6.96 6.71 2.93 21.08 0.00 0.00 0.00 4.64 0.00 3.25 0.00 0.00 0.00 4.94 0.00 4.36 0.00 2.24 0.00 3.26 0.00 0.00 3.67 13 ER4a ExonRegion 0 12.15 77.00 40.00 60.44 37.46 57.99 54.17 57.35 123.81 92.98 51.20 113.86 112.38 77.90 34.03 46.95 75.13 49.92 65.45 157.28 62.85 115.64 59.89 14 E4a_E5a KnownJunction 0 10.89 107.22 36.16 73.42 22.92 51.67 67.39 56.76 115.31 95.47 61.28 174.51 124.99 81.52 33.62 41.36 96.21 58.45 86.31 194.31 82.53 132.57 69.40 15 ER5a ExonRegion 1 11.16 61.90 40.59 72.85 40.14 70.24 66.31 72.74 136.57 99.23 74.49 145.38 140.92 83.79 29.24 55.05 92.43 68.22 57.78 148.64 75.91 112.20 74.98 16 E5_Da NovelBoundary 0 0.00 6.31 11.29 13.32 3.57 5.56 9.63 4.19 5.01 3.95 2.00 0.00 13.64 6.83 6.30 4.36 24.03 4.97 0.00 8.76 0.00 0.00 4.35 17 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 2.53 0.00 0.00 4.94 6.30 0.00 9.26 0.00 0.00 0.00 2.53 7.96 0.00 18 E5a_E7a KnownJunction 1 16.23 62.62 62.45 75.22 63.16 47.36 79.76 69.05 141.61 110.48 36.22 173.46 225.63 68.28 25.71 44.52 95.84 117.98 66.45 138.06 123.55 127.61 95.18 19 I5 Intron 0 3.53 6.83 12.06 16.09 7.35 2.52 6.93 5.50 2.74 5.19 5.14 22.70 21.42 8.00 5.05 6.17 6.75 3.09 1.49 6.16 2.25 6.70 4.89 20 I5_SR1 SilentIntronRegion 0 1.70 6.12 9.11 10.14 4.61 2.25 7.23 6.27 2.85 6.64 3.07 17.07 25.93 6.03 5.70 3.78 5.96 1.14 0.83 3.70 0.51 5.91 8.09 21 I5_AR1 ActiveIntronRegion 0 4.07 8.42 7.29 13.62 6.14 2.30 7.53 5.26 1.23 2.04 7.75 25.88 25.15 9.39 5.03 5.52 14.24 2.61 2.90 8.95 3.47 6.23 3.82 22 I5_SR2 SilentIntronRegion 0 4.59 5.62 11.91 19.25 9.56 2.97 7.29 4.75 3.33 4.71 3.59 22.93 23.57 7.90 4.41 5.37 5.06 2.16 0.87 4.40 0.67 6.37 4.22 23 I5_AR3 ActiveIntronRegion 0 1.67 9.13 19.74 15.04 4.95 1.76 5.17 7.15 2.62 8.53 8.38 23.65 8.54 8.54 6.29 10.93 4.49 7.66 2.26 10.08 6.68 8.73 5.22 24 E6_Aa NovelBoundary 0 6.82 6.12 29.51 30.13 11.46 7.50 11.44 7.93 7.00 3.12 31.64 13.05 12.99 12.07 14.09 25.63 16.08 17.70 12.42 22.43 14.21 11.08 15.96 25 ER6a ExonRegion 0 0.00 0.00 0.00 0.19 0.00 0.00 0.06 0.33 0.01 0.00 0.60 1.47 0.18 0.62 0.17 0.14 0.41 0.00 0.00 0.00 0.29 0.30 0.14 26 E6_Da NovelBoundary 0 21.11 11.97 16.20 23.57 11.80 14.14 2.25 2.55 9.20 7.17 14.64 37.06 22.24 27.90 20.03 15.21 15.33 9.24 12.99 19.49 8.96 14.57 8.11 27 I6 Intron 0 5.98 10.08 13.50 16.49 7.27 1.99 5.34 7.30 3.04 3.73 2.53 10.92 8.08 3.22 5.62 4.15 2.55 1.58 2.37 5.49 1.10 5.56 2.84 28 I6_AR1 ActiveIntronRegion 0 16.28 26.50 30.36 31.12 15.77 2.84 11.91 15.66 6.16 9.86 9.23 37.72 21.82 13.18 16.28 9.04 8.19 2.06 2.77 11.22 2.46 19.77 4.92 29 I6_SR1 SilentIntronRegion 1 8.31 4.67 11.93 13.71 15.42 1.70 2.32 10.95 1.94 3.69 7.29 16.24 1.84 9.86 16.85 17.80 0.00 1.85 1.93 2.30 3.20 10.17 6.29 30 I6_AR3 ActiveIntronRegion 0 7.78 24.43 22.61 33.86 15.09 1.80 7.95 10.11 4.74 6.08 5.69 23.20 8.96 6.34 16.45 5.10 4.05 0.23 1.56 9.91 0.81 20.95 3.96 31 ER7a ExonRegion 0 9.39 68.99 60.61 74.02 46.18 81.47 70.58 86.90 116.83 91.57 48.26 127.63 105.90 77.73 36.42 61.59 83.72 106.98 96.44 140.51 122.43 131.59 75.74 32 E7a_E8a KnownJunction 0 20.67 83.27 46.95 71.62 30.05 75.07 80.33 85.56 100.58 78.92 46.54 81.03 129.21 77.52 63.79 42.55 34.88 92.86 75.01 114.28 112.99 121.92 55.57 33 ER8a ExonRegion 0 13.33 71.20 45.24 64.07 48.30 99.55 83.43 66.87 120.57 78.17 42.76 95.46 113.36 68.96 28.20 54.37 59.95 74.11 64.62 124.36 84.43 89.45 70.41 34 E8_Da KnownBoundary 0 6.96 12.43 6.71 13.88 4.24 11.13 11.44 11.30 5.21 4.11 0.00 0.00 6.33 2.12 0.00 0.00 0.00 3.94 8.38 12.02 0.00 3.12 0.00 35 E8a_E9a KnownJunction 1 11.11 43.94 46.10 65.76 40.49 83.93 49.73 80.38 128.79 77.95 24.27 183.96 149.67 51.74 24.11 72.37 56.01 67.90 45.84 133.78 55.23 87.81 115.33 36 ER8b ExonRegion 0 3.97 6.43 6.12 10.33 5.95 3.41 10.68 5.43 3.30 3.74 1.19 7.68 7.54 1.58 2.08 3.96 3.02 2.88 3.07 7.72 1.19 2.07 2.95 37 E8_Db NovelBoundary 0 0.00 5.79 7.98 19.78 3.14 19.14 10.86 4.23 4.66 1.48 0.00 17.11 0.00 0.00 5.07 12.39 4.49 4.81 0.00 3.20 0.00 0.00 7.77 38 ER9a ExonRegion 0 10.74 50.90 45.02 56.57 20.11 67.50 50.66 90.46 147.77 101.30 54.20 117.76 102.84 67.96 41.66 53.65 88.78 49.17 79.94 139.44 55.35 150.56 94.84 39 E9a_E10a KnownJunction 0 3.78 43.68 53.40 50.14 33.87 84.33 77.33 64.53 142.13 89.26 61.49 118.99 75.00 65.28 47.35 48.36 109.02 55.63 56.94 172.00 83.52 96.99 72.05 40 ER10a ExonRegion 0 16.07 69.86 60.26 70.61 49.90 115.52 86.43 94.89 136.29 105.22 52.19 166.82 113.09 74.23 38.46 59.69 89.80 64.52 72.06 155.97 62.16 140.60 89.12 41 E10a_E11a KnownJunction 0 10.67 78.74 61.12 102.55 57.56 112.61 95.66 78.78 153.04 110.05 49.38 100.53 86.36 67.16 38.57 56.40 78.73 61.60 82.54 162.67 59.31 135.33 125.06 42 ER11a ExonRegion 0 13.42 53.86 58.16 69.02 46.33 89.28 68.99 63.02 124.80 83.72 40.36 172.27 94.73 56.07 35.20 39.22 70.32 51.40 62.79 149.61 73.56 112.35 79.06 43 E11a_E12a KnownJunction 0 12.82 68.74 61.94 49.14 85.65 81.20 65.23 65.84 126.10 99.20 40.54 167.60 116.55 62.86 30.90 43.66 51.52 53.72 54.78 154.62 81.42 104.53 56.08 44 ER12a ExonRegion 0 23.88 137.84 131.14 151.48 83.17 114.66 83.45 127.81 143.63 107.14 32.74 91.48 75.46 44.92 43.08 33.75 48.78 55.12 45.15 114.10 44.62 128.21 53.64 45 IG36_AR1 ActiveIntergenicRegion 0 5.54 8.28 3.66 19.02 16.80 7.89 9.64 13.55 12.38 13.12 6.14 18.69 5.54 5.08 2.91 13.74 3.97 15.68 18.63 11.41 3.06 12.89 21.58 46 IG36_SR2 SilentIntergenicRegion 0 3.80 11.12 9.52 18.93 27.58 11.97 18.93 11.28 13.89 8.96 4.53 15.46 13.20 4.40 1.84 9.69 1.18 15.92 9.36 10.81 1.44 4.70 9.25 47 IG36_AR2 ActiveIntergenicRegion 0 2.46 4.96 8.27 23.36 15.54 10.66 3.38 11.67 13.04 5.76 2.02 7.22 9.29 2.54 1.53 3.11 2.30 7.37 8.88 8.90 0.26 6.05 5.12 48 IG36_AR5 ActiveIntergenicRegion 0 2.77 6.24 12.97 22.61 15.98 5.48 2.48 24.86 6.40 7.78 0.36 5.94 4.19 2.63 4.41 0.52 0.88 1.40 4.43 4.65 0.00 5.39 0.28