Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CU459211.2 Gene 0 44.00 52.22 52.58 26.19 37.97 23.54 40.77 18.05 15.28 21.54 12.64 15.70 15.96 13.02 15.30 15.23 20.02 25.00 17.27 42.86 15.05 36.45 12.28 2 439954 Transcript 0 33.97 50.65 43.75 24.11 37.30 16.82 36.29 16.74 13.27 14.49 10.62 16.54 15.69 12.66 17.67 15.19 15.80 17.57 14.63 40.13 12.12 38.85 14.01 3 ER1a ExonRegion 0 89.00 64.21 34.54 9.62 38.56 30.04 26.94 18.23 16.49 26.52 15.05 2.97 2.90 8.65 13.75 15.85 35.69 36.22 15.75 42.90 27.02 22.07 19.74 4 E1a_E2a KnownJunction 0 10.96 43.35 6.36 10.42 39.73 0.00 14.44 3.98 3.36 12.63 2.68 12.45 13.15 15.60 0.00 19.82 13.37 5.89 0.00 15.53 2.97 16.41 12.21 5 ER2a ExonRegion 0 10.15 29.18 1.14 2.34 24.62 17.74 41.20 0.19 1.35 3.27 23.72 22.52 40.37 29.50 16.39 24.06 38.72 4.07 28.71 26.02 17.24 38.40 8.61 6 E2_Da NovelBoundary 0 6.74 38.15 12.00 17.55 3.99 7.84 15.19 12.73 12.21 10.58 4.05 0.00 6.17 2.47 0.00 0.00 8.23 2.20 0.00 17.13 0.00 0.00 0.00 7 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 0.00 0.00 0.00 8 E3_Aa NovelBoundary 0 3.63 0.00 9.14 3.36 12.48 8.46 37.89 0.00 1.53 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.43 4.52 6.14 0.00 6.25 0.00 9 ER3a ExonRegion 0 57.52 39.82 89.91 49.50 43.75 36.72 39.93 22.61 26.42 39.40 10.83 15.05 16.49 12.95 18.10 20.07 15.14 50.78 22.17 48.94 18.84 49.34 13.03 10 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E3a_E5a NovelJunction 0 2.82 40.12 9.52 21.84 15.11 23.34 16.34 8.79 28.04 18.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.61 8.19 24.29 0.00 0.00 0.00 12 ER4a ExonRegion 0 104.44 139.34 86.07 38.98 27.03 20.80 35.77 36.98 26.30 22.17 25.53 22.17 14.96 19.24 29.46 30.75 26.75 35.62 27.62 70.87 36.55 63.30 24.30 13 E4a_E5a KnownJunction 1 153.51 199.64 141.12 83.11 88.12 61.16 103.52 65.43 45.69 28.55 35.48 92.88 72.24 60.39 94.20 54.26 43.67 53.60 53.74 137.29 61.90 129.82 65.22 14 ER5a ExonRegion 0 44.56 88.91 134.66 64.01 74.69 44.31 84.68 47.69 37.04 45.53 20.89 28.27 30.14 20.82 24.90 21.79 21.50 48.54 24.82 74.32 19.20 54.93 20.97 15 E5a_E6a KnownJunction 0 19.41 70.65 97.84 46.71 96.26 24.82 59.88 57.75 39.73 33.20 30.59 12.15 13.64 16.89 42.77 47.17 41.42 39.34 28.89 125.34 22.30 148.61 51.13 16 ER6a ExonRegion 0 1.58 4.84 16.77 2.26 6.86 2.47 9.34 4.89 0.92 1.29 3.49 7.22 9.49 3.66 1.60 2.63 5.01 2.36 1.43 23.72 2.28 8.48 0.91 17 E6a_E7a KnownJunction 0 0.00 9.41 13.90 2.06 17.15 8.69 0.00 0.00 1.79 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 4.19 0.00 3.00 0.00 0.00 0.00 18 I6 Intron 0 4.68 18.15 13.66 30.59 19.44 29.00 36.93 10.12 10.15 18.06 3.91 10.90 11.96 9.20 5.80 10.94 5.60 13.20 5.10 24.10 1.60 13.86 3.36 19 I6_SR1 SilentIntronRegion 0 4.68 18.16 13.67 30.61 19.46 29.03 36.96 10.13 10.15 18.08 3.91 10.90 11.97 9.20 5.81 10.94 5.61 13.21 5.11 24.12 1.60 13.87 3.36 20 ER7a ExonRegion 1 22.89 42.90 43.42 23.67 41.01 16.98 57.69 9.68 8.47 15.52 4.45 31.11 16.31 13.35 16.49 10.01 16.58 6.21 14.30 45.37 2.32 39.90 4.79 21 E7_Da NovelBoundary 0 24.67 26.31 35.19 20.78 40.24 42.31 45.71 25.18 19.65 39.62 27.74 46.82 12.17 23.66 17.18 15.55 32.63 30.68 35.39 80.02 25.88 103.85 53.27 22 E7a_E8a KnownJunction 1 77.27 132.41 99.29 77.15 120.88 24.36 125.25 26.57 27.37 23.58 7.11 37.21 14.28 16.36 45.99 19.65 20.38 20.69 31.91 77.28 5.93 83.58 21.51 23 I7 Intron 0 9.10 15.70 24.62 25.00 16.47 24.90 23.28 13.09 13.31 22.88 2.83 8.87 2.88 7.30 4.55 9.30 10.32 48.45 18.05 31.18 14.21 33.59 17.21 24 I7_SR1 SilentIntronRegion 0 9.13 15.75 24.71 25.10 16.53 24.99 23.37 13.14 13.36 22.96 2.84 8.90 2.90 7.33 4.57 9.33 10.36 48.63 18.12 31.30 14.26 33.71 17.28 25 ER8a ExonRegion 0 17.90 42.98 22.47 24.24 41.80 12.67 43.40 7.37 3.97 9.12 6.65 13.69 14.07 8.81 11.29 7.42 6.24 4.94 13.92 27.37 1.69 40.17 6.75 26 E8_Da NovelBoundary 0 35.27 94.33 277.37 380.47 64.60 54.63 89.03 98.54 48.90 137.08 18.06 47.87 40.91 17.36 19.28 11.88 8.88 13.93 21.46 67.62 2.66 185.17 35.08 27 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E8a_E10a NovelJunction 0 23.93 8.68 13.87 6.26 4.07 0.00 1.81 0.00 0.00 1.29 0.00 6.15 0.00 0.00 0.00 0.00 3.46 0.00 4.52 0.00 0.00 0.00 0.00 29 I8 Intron 0 18.78 101.12 239.69 298.67 125.90 133.95 140.14 86.67 52.14 132.35 4.24 28.03 17.74 10.89 17.43 9.27 4.51 25.95 21.90 64.42 3.44 79.84 7.16 30 I8_SR1 SilentIntronRegion 0 18.82 101.30 240.15 299.24 126.13 134.20 140.41 86.83 52.24 132.60 4.25 28.08 17.78 10.91 17.47 9.29 4.52 26.00 21.94 64.54 3.44 79.98 7.16 31 ER9a ExonRegion 1 2.12 4.07 0.00 0.00 10.70 1.83 10.59 0.00 0.00 0.00 1.93 0.00 23.45 1.62 2.90 0.00 0.00 1.85 0.00 4.26 0.00 4.17 2.94 32 I9 Intron 0 0.00 2.49 3.73 4.97 28.38 9.73 20.53 0.00 0.00 0.00 0.00 1.45 0.00 0.00 2.02 2.43 0.00 4.89 1.30 10.42 0.90 11.90 1.20 33 I9_SR1 SilentIntronRegion 0 0.00 2.53 3.79 5.05 28.78 9.87 20.85 0.00 0.00 0.00 0.00 1.48 0.00 0.00 2.05 2.46 0.00 4.97 1.32 10.59 0.91 12.08 1.22 34 E10_Aa NovelBoundary 1 3.70 66.76 21.67 23.17 18.17 18.85 13.96 30.72 20.40 21.87 12.53 50.87 12.82 34.20 13.35 14.53 21.97 8.91 0.00 64.49 0.00 0.00 3.93 35 ER10a ExonRegion 0 0.12 0.06 0.00 0.00 0.30 0.10 0.59 0.00 0.00 0.00 0.05 0.00 0.91 0.05 0.16 0.00 0.00 0.10 0.00 0.12 0.00 0.06 0.16