Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	NPDC1	Gene	0	56.12	148.31	396.74	148.58	47.82	190.29	44.01	232.97	207.12	233.31	0.61	1.60	1.51	0.77	2.44	0.55	6.34	403.32	254.46	185.02	220.90	102.58	97.24
2	371601	Transcript	0	0.17	12.20	10.69	1.47	0.11	8.95	4.08	2.77	6.47	8.72	0.00	0.00	0.00	0.00	1.04	0.00	1.06	29.42	30.83	10.64	4.85	6.25	13.27
3	485589	Transcript	0	1.19	1.75	5.50	4.76	0.00	9.68	1.97	10.28	5.74	6.62	0.00	0.00	0.00	0.00	0.00	0.00	1.04	24.60	8.66	8.81	3.63	3.80	14.89
4	488145	Transcript	0	3.01	7.20	41.25	10.26	1.80	11.61	6.81	23.90	19.15	21.44	0.45	0.00	0.00	0.01	0.02	0.00	0.85	33.58	18.23	9.26	15.88	3.03	3.35
5	371600	Transcript	0	54.23	85.53	261.14	105.61	48.66	159.51	44.89	142.57	103.61	150.41	0.27	0.93	1.35	0.78	1.26	0.89	4.94	298.86	175.69	106.17	120.28	65.17	82.82
6	472668	Transcript	0	0.00	0.00	0.00	0.00	0.00	5.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.07	0.00	0.00	0.00
7	496498	Transcript	0	3.37	14.62	38.83	27.60	6.86	16.50	2.48	15.77	17.52	29.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	41.34	51.07	24.14	21.83	12.37	15.51
8	ER1a	ExonRegion	0	0.17	12.20	10.69	1.47	0.11	8.95	4.08	2.77	6.47	8.72	0.00	0.00	0.00	0.00	1.04	0.00	1.06	29.42	30.83	10.64	4.85	6.25	13.27
9	ER1b	ExonRegion	0	6.45	34.54	46.36	4.35	8.98	99.77	9.29	35.26	32.16	55.32	0.00	0.00	0.00	0.00	0.78	0.00	1.15	152.61	109.23	41.05	66.83	19.46	45.63
10	E1_Ac	KnownBoundary	0	28.30	74.66	39.56	7.19	26.83	193.13	18.20	55.94	54.69	59.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	167.72	123.77	53.37	181.01	5.33	44.56
11	ER1c	ExonRegion	0	5.90	28.04	51.66	6.01	8.66	38.54	8.27	45.44	34.65	45.79	0.00	0.00	0.00	0.03	1.11	0.00	0.98	89.10	77.59	45.76	113.68	23.98	23.71
12	E1a_E2b	KnownJunction	0	9.04	85.18	169.07	44.22	7.30	88.02	3.71	119.48	96.93	118.00	0.00	0.00	0.00	0.00	4.45	0.00	0.00	269.86	77.84	66.22	82.29	46.35	40.89
13	I1	Intron	0	24.25	64.71	193.31	70.78	35.10	120.51	36.59	103.09	77.83	126.87	0.31	0.11	0.49	0.61	1.38	0.09	3.16	234.65	130.94	78.64	104.21	45.88	63.26
14	I1_SR1	SilentIntronRegion	0	5.69	17.37	74.71	17.72	9.28	34.11	10.49	49.01	34.17	55.32	0.27	0.00	1.08	0.19	0.00	0.00	0.92	95.69	64.79	36.65	65.71	16.16	21.10
15	I1_AR1	ActiveIntronRegion	0	17.50	57.55	198.95	70.75	34.30	127.62	36.44	112.16	78.84	138.67	0.00	0.00	0.46	0.97	1.49	0.00	3.54	259.48	140.86	76.84	114.49	42.67	68.76
16	I1_SR2	SilentIntronRegion	0	32.64	96.26	265.12	115.70	55.22	147.20	57.09	171.81	110.99	173.73	0.83	0.00	1.66	0.44	2.85	1.10	4.27	347.89	193.18	106.88	127.28	69.09	89.36
17	I1_AR2	ActiveIntronRegion	0	37.01	89.20	241.32	91.59	46.02	158.01	47.20	114.70	95.02	150.00	0.43	0.27	0.00	0.63	1.81	0.03	3.94	274.49	149.69	97.53	114.68	59.88	78.04
18	E2_Aa	NovelBoundary	0	42.90	111.76	327.49	148.73	66.30	212.60	43.28	142.94	115.02	191.77	0.00	0.00	0.00	0.00	0.00	0.00	4.11	380.75	208.29	100.93	100.51	64.91	75.97
19	ER2a	ExonRegion	0	54.23	85.53	261.14	105.61	48.66	159.51	44.89	142.57	103.61	150.41	0.27	0.93	1.35	0.78	1.26	0.89	4.94	298.86	175.69	106.17	120.28	65.17	82.82
20	E2_Ab	KnownBoundary	0	63.42	75.71	176.93	61.36	29.88	163.43	30.65	134.44	102.08	122.57	2.21	0.00	0.00	0.00	0.00	0.00	3.46	216.43	131.02	51.65	90.69	50.89	51.39
21	ER2b	ExonRegion	0	45.43	156.49	572.42	173.99	30.22	276.04	50.34	351.44	317.59	368.51	0.81	2.61	1.35	0.89	3.80	0.94	12.91	599.10	347.14	231.87	342.89	169.01	134.42
22	E2_Da	KnownBoundary	0	6.74	0.00	13.78	10.65	0.00	20.61	1.99	26.70	13.74	17.06	0.00	0.00	0.00	0.00	0.00	0.00	4.39	57.87	22.49	16.55	5.68	8.57	32.52
23	E2a_E3a	KnownJunction	0	52.01	144.25	874.66	230.01	35.74	270.87	43.90	521.27	430.06	472.64	0.00	0.00	0.00	0.00	0.00	0.00	4.30	803.49	454.98	235.34	340.58	253.20	163.38
24	ER2c	ExonRegion	0	1.19	1.75	5.50	4.76	0.00	9.68	1.97	10.28	5.74	6.62	0.00	0.00	0.00	0.00	0.00	0.00	1.04	24.60	8.66	8.81	3.63	3.80	14.89
25	E2_Db	NovelBoundary	0	24.75	26.25	17.89	10.99	15.03	55.08	17.80	19.72	20.60	31.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	68.36	24.00	19.69	27.18	3.12	12.12
26	I2_AR2	ActiveIntronRegion	0	11.78	16.50	50.72	17.20	6.29	19.37	7.64	34.11	28.11	42.87	0.59	1.33	0.00	0.41	0.94	0.00	1.19	69.33	24.66	24.65	14.05	7.86	7.77
27	ER3a	ExonRegion	0	91.36	215.79	880.08	258.07	51.18	261.90	53.03	479.76	494.85	532.54	1.56	2.75	3.13	1.99	2.07	0.12	10.82	741.26	481.52	335.95	468.29	212.47	181.93
28	E3_Da	KnownBoundary	0	10.52	14.73	74.78	14.95	4.24	27.37	8.74	48.55	62.93	50.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	76.07	29.84	15.15	17.24	10.23	7.26
29	E3a_E3b	KnownJunction	0	119.43	202.60	529.70	158.92	41.77	199.60	33.70	292.57	324.39	359.68	0.00	0.00	0.00	0.00	4.45	0.00	24.50	504.11	231.54	220.51	338.23	91.91	83.06
30	E3a_E4a	NovelJunction	0	0.00	9.74	14.90	3.66	0.00	0.00	6.27	19.47	4.40	7.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.77	16.94	0.00	0.00	0.00	0.00
31	ER3b	ExonRegion	0	6.02	12.36	82.49	19.15	3.60	23.23	12.29	47.80	38.30	42.88	0.89	0.00	0.00	0.02	0.04	0.00	1.69	67.16	36.47	18.52	31.76	6.06	6.70
32	E3_Ab	KnownBoundary	0	6.89	21.38	67.50	12.52	4.16	22.43	13.56	32.53	39.44	34.17	2.47	0.00	0.00	0.00	0.00	0.00	4.58	72.25	35.20	11.70	23.29	0.00	7.68
33	ER3c	ExonRegion	0	107.53	289.19	700.82	201.87	66.48	350.43	69.98	348.91	365.44	424.23	1.67	1.99	3.48	1.96	2.07	0.00	11.49	672.61	404.45	307.27	406.66	168.02	149.89
34	E3b_E4a	KnownJunction	0	180.70	497.87	832.44	298.30	104.07	443.32	91.06	494.53	419.06	498.91	2.68	0.00	0.00	0.00	6.30	0.00	16.92	909.98	438.88	334.10	437.57	196.38	171.58
35	ER3d	ExonRegion	0	0.00	2.03	0.00	1.36	0.00	0.00	1.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER4a	ExonRegion	0	85.48	332.78	704.86	246.58	85.78	373.30	74.81	423.01	374.44	407.53	0.61	0.00	2.66	1.89	10.09	0.00	13.94	634.66	393.13	363.67	377.20	139.04	144.68
37	E4a_E5a	KnownJunction	0	143.95	426.83	829.21	273.59	128.86	422.37	94.24	497.00	461.28	452.65	0.00	0.00	0.00	0.00	8.90	0.00	14.03	721.21	435.40	385.68	440.72	122.65	134.53
38	ER5a	ExonRegion	0	74.30	370.52	780.95	254.43	87.73	356.30	84.39	498.91	432.55	470.43	2.02	6.11	0.72	1.61	5.15	0.00	11.92	762.10	397.98	404.38	500.11	149.06	153.81
39	E5a_E6a	KnownJunction	0	111.20	333.43	1015.52	385.50	105.69	386.03	102.06	543.41	486.37	535.09	2.32	18.91	6.49	0.00	4.82	0.00	4.77	1046.91	390.41	367.20	431.02	183.82	180.63
40	ER6a	ExonRegion	0	93.66	337.19	780.94	298.26	86.39	312.37	78.83	490.56	427.39	462.26	0.43	6.38	4.29	0.74	9.24	2.67	8.73	825.07	554.36	410.38	470.17	212.73	181.77
41	E6_Da	NovelBoundary	0	35.71	40.06	130.24	52.04	11.97	93.92	14.49	99.36	108.45	128.32	0.00	0.00	0.00	0.00	8.90	0.00	0.00	162.91	98.92	61.55	22.61	2.82	30.22
42	E6a_E7a	NovelJunction	0	0.00	12.83	59.61	40.42	8.66	37.59	11.04	46.70	21.61	32.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	64.83	37.27	15.85	46.02	15.31	21.08
43	E6a_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.07	0.00	0.00	0.00
44	E6a_E7c	KnownJunction	0	196.92	490.70	736.37	359.13	108.32	467.97	113.28	659.77	539.84	482.98	0.00	5.55	0.00	0.00	4.82	3.42	25.62	1074.60	549.00	446.59	500.33	228.03	136.32
45	ER6b	ExonRegion	0	129.41	392.67	684.98	302.63	91.10	360.39	90.66	573.35	484.11	458.05	0.00	8.04	6.70	1.16	6.63	5.66	16.19	935.31	544.24	441.23	512.10	220.36	171.16
46	E7_Ab	NovelBoundary	0	10.59	62.03	137.61	74.25	20.12	57.64	10.55	57.38	51.10	92.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	150.35	143.91	63.09	64.43	38.39	52.33
47	ER7a	ExonRegion	0	3.37	14.62	38.83	27.60	6.86	16.50	2.48	15.77	17.52	29.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	41.34	51.07	24.14	21.83	12.37	15.51
48	ER7b	ExonRegion	0	16.20	38.22	148.69	75.69	15.78	52.96	10.52	68.75	63.86	99.60	0.00	0.07	0.24	0.00	0.05	0.05	0.28	180.47	160.81	82.13	78.31	30.82	27.09
49	E7_Ac	KnownBoundary	0	24.75	54.33	193.43	97.69	14.94	87.79	19.03	81.74	81.10	114.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	226.46	95.81	101.88	90.94	29.02	35.43
50	ER7c	ExonRegion	0	170.47	388.35	958.32	439.94	94.10	418.56	86.03	712.16	578.75	532.44	1.01	4.55	5.57	2.13	6.59	0.25	11.90	1228.21	618.59	528.83	512.41	279.32	220.37
51	E7_Da	NovelBoundary	0	6.59	11.64	120.78	17.45	16.21	15.73	2.21	47.65	81.10	69.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	95.14	34.45	34.13	5.44	3.12	3.50
52	E7a_E8a	KnownJunction	0	166.92	566.94	937.76	468.61	165.03	391.25	120.61	572.57	550.17	529.37	4.26	6.30	0.00	0.00	10.26	0.00	13.56	1167.45	542.60	449.27	479.45	264.16	264.97
53	E8_Aa	NovelBoundary	0	10.30	30.19	140.56	29.90	7.13	46.11	9.85	49.82	54.95	69.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	163.45	40.10	47.43	14.39	2.82	0.00
54	ER8a	ExonRegion	0	73.15	266.44	718.98	322.16	97.64	274.11	63.00	400.32	397.52	391.87	2.18	0.72	2.02	0.00	5.79	0.84	8.37	542.73	414.82	360.17	367.97	174.18	142.44
55	E8_Da	KnownBoundary	0	47.71	177.86	381.18	198.28	79.03	155.88	31.31	222.54	236.60	200.31	0.00	0.00	6.01	0.00	0.00	0.00	4.77	332.04	344.57	216.68	218.14	135.33	155.36
56	E8_Db	KnownBoundary	0	31.49	157.80	517.04	248.12	36.76	130.44	40.45	348.55	276.59	248.07	0.00	6.30	0.00	0.00	0.00	0.00	4.77	492.88	407.26	230.04	220.73	156.70	132.48
57	ER8b	ExonRegion	0	43.65	205.14	640.26	296.43	68.23	186.59	41.87	397.22	363.05	330.81	0.12	3.25	1.76	0.00	5.80	0.00	8.46	616.34	478.20	285.24	311.41	187.52	180.60
58	ER8c	ExonRegion	0	39.63	179.19	341.80	154.66	35.38	130.64	26.27	206.66	211.73	176.81	0.00	3.41	0.00	0.34	1.70	0.00	4.82	244.47	244.44	181.89	202.89	121.60	66.21
59	IG1	Intergenic	0	1.46	10.59	20.81	3.79	3.42	16.94	5.59	21.26	14.83	20.16	0.38	0.00	0.00	0.00	0.29	0.00	0.65	25.10	5.63	15.05	1.73	0.61	0.29
60	IG1_AR1	ActiveIntergenicRegion	0	0.00	20.74	30.76	1.36	6.15	13.94	0.79	19.70	19.76	20.64	0.00	0.00	0.00	0.00	0.00	0.00	3.30	17.37	6.37	14.26	0.00	2.08	0.00
61	IG1_SR1	SilentIntergenicRegion	0	1.70	10.86	22.09	4.26	3.22	18.83	6.23	23.12	15.93	21.78	0.44	0.00	0.00	0.00	0.33	0.00	0.39	28.50	6.28	15.89	2.03	0.53	0.34