Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL138781.1 Gene 0 0.62 0.45 0.00 1.35 1.58 0.14 0.39 0.95 1.09 1.51 5.70 7.32 2.77 10.15 9.35 5.70 2.43 2.17 1.17 1.72 0.49 0.31 0.43 2 501329 Transcript 0 0.27 0.18 0.00 0.60 0.69 0.05 0.16 0.44 0.45 0.66 2.49 3.29 1.24 4.83 4.84 2.66 1.06 0.97 0.50 0.76 0.21 0.12 0.24 3 ER1a ExonRegion 0 0.63 0.90 0.00 1.20 1.19 0.27 0.59 0.00 1.90 1.27 5.73 6.34 3.35 11.15 10.43 3.08 3.88 2.45 1.42 1.58 0.33 0.62 0.00 4 E1_Da NovelBoundary 0 3.41 0.00 0.00 0.00 0.00 0.00 1.77 0.00 1.79 2.77 0.00 0.00 7.14 12.07 8.90 3.85 9.35 10.24 0.00 6.01 3.15 0.00 4.01 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 I1 Intron 0 0.91 2.61 0.00 0.87 2.29 1.57 1.13 1.10 0.79 1.46 3.31 10.70 4.73 9.83 14.77 2.55 1.41 2.36 0.00 0.91 0.94 2.68 0.00 7 I1_AR1 ActiveIntronRegion 0 0.92 2.66 0.00 0.89 2.33 1.60 1.15 1.12 0.79 1.49 3.35 10.88 4.81 9.99 14.98 2.59 1.44 2.40 0.00 0.93 0.96 2.72 0.00 8 E2_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.21 3.04 2.16 5.85 0.00 31.84 15.70 11.88 13.37 5.89 0.00 0.00 2.72 0.00 0.00 9 ER2a ExonRegion 0 0.00 0.00 0.00 0.12 0.00 0.00 0.00 0.00 0.05 0.00 0.21 0.64 0.40 2.87 5.00 0.76 0.28 0.28 0.00 0.09 0.00 0.00 0.25 10 E2_Da NovelBoundary 0 0.00 0.00 0.00 0.00 3.31 0.00 0.00 0.00 2.49 4.06 4.47 0.00 0.00 19.13 13.97 8.37 4.77 4.81 0.00 2.88 0.00 0.00 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 I2 Intron 0 0.95 1.14 0.20 1.59 2.40 0.62 0.89 0.29 1.44 2.49 6.72 4.25 1.67 15.37 9.45 6.33 2.59 1.14 1.79 1.43 0.99 0.70 0.00 13 I2_AR1 ActiveIntronRegion 0 0.95 1.14 0.21 1.60 2.41 0.62 0.89 0.29 1.45 2.50 6.75 4.27 1.68 15.43 9.49 6.36 2.60 1.14 1.79 1.44 0.99 0.70 0.00 14 E3_Aa NovelBoundary 0 6.08 0.00 0.00 0.00 3.14 2.56 1.68 0.00 0.00 2.87 2.63 10.95 6.49 12.83 15.20 7.60 0.00 2.07 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 0 0.72 0.00 0.00 1.70 2.27 0.00 0.22 2.18 0.31 2.03 6.52 9.48 2.46 10.15 8.79 9.45 1.12 2.14 1.08 2.15 0.75 0.00 0.96 16 IG15 Intergenic 0 1.91 0.87 1.41 0.34 2.06 0.28 1.46 1.19 1.46 1.76 7.23 13.09 14.39 21.68 24.93 11.78 9.72 3.51 1.81 1.44 2.74 0.79 1.15 17 IG15_AR2 ActiveIntergenicRegion 0 1.55 0.10 0.00 0.00 2.27 0.00 0.00 0.00 0.41 1.36 4.54 1.23 0.00 9.74 3.43 10.11 5.23 0.00 0.00 2.48 0.88 0.21 0.88 18 IG15_AR5 ActiveIntergenicRegion 0 1.48 0.26 2.19 0.35 1.95 0.31 1.20 1.99 2.29 2.53 10.83 21.05 21.87 27.99 32.79 19.81 13.51 3.99 1.94 1.46 3.70 0.36 1.01 19 IG15_SR2 SilentIntergenicRegion 0 2.76 0.58 1.50 0.44 2.39 0.26 1.62 1.47 1.91 2.02 10.41 17.98 23.70 37.35 43.64 16.73 15.56 4.84 1.79 1.76 3.13 0.85 1.05 20 IG15_AR6 ActiveIntergenicRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 3.87 21.65 0.00 1.77 0.00 0.00 0.00 4.37 0.00 4.26 0.00 2.08 0.00