Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-492E3.3 Gene 0 4.52 2.17 7.80 5.15 3.22 2.20 4.95 4.81 0.74 3.65 0.00 0.00 0.96 0.00 0.55 0.00 0.44 2.33 1.70 3.98 0.88 3.06 9.80 2 427778 Transcript 0 2.58 1.43 4.57 3.07 2.00 1.37 2.83 2.83 0.42 2.34 0.00 0.00 0.55 0.00 0.31 0.00 0.25 1.33 0.97 2.27 0.50 1.75 5.60 3 ER1a ExonRegion 0 7.74 2.33 12.50 7.90 4.28 2.94 8.48 7.66 1.26 4.32 0.00 0.00 1.64 0.00 0.94 0.00 0.75 3.99 2.91 6.81 1.51 5.24 16.74 4 E1_Da NovelBoundary 0 17.04 6.58 25.28 7.92 6.96 0.00 11.22 4.31 11.00 10.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 13.42 0.00 5.63 33.72 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 3.48 0.84 1.50 1.67 1.10 2.26 1.63 3.18 0.76 1.41 0.00 0.00 0.00 0.00 0.84 1.22 1.36 3.02 3.93 1.75 0.91 3.43 12.08 7 Ix_SR1 SilentIntronRegion 0 3.51 0.84 1.51 1.68 1.11 2.28 1.65 3.20 0.76 1.42 0.00 0.00 0.00 0.00 0.85 1.23 1.37 3.05 3.96 1.75 0.91 3.46 12.18 8 Ix Intron 0 3.31 2.55 14.28 5.72 5.86 4.59 7.87 4.84 5.76 13.91 0.00 0.00 2.42 0.00 0.00 0.00 0.00 3.74 5.98 8.65 5.52 5.87 11.03 9 Ix_SR1 SilentIntronRegion 0 3.33 2.56 14.37 5.75 5.90 4.62 7.92 4.87 5.79 13.99 0.00 0.00 2.43 0.00 0.00 0.00 0.00 3.76 6.02 8.69 5.55 5.90 11.09 10 Ix Intron 0 9.39 5.23 20.83 11.55 8.53 9.30 9.44 11.93 9.88 18.50 0.14 0.31 3.27 0.10 0.35 0.37 0.87 5.61 10.54 7.34 12.02 18.78 24.77 11 Ix_AR1 ActiveIntronRegion 0 17.93 6.82 29.17 9.32 10.62 9.06 10.86 11.60 12.18 18.70 0.00 0.94 8.04 0.50 1.60 1.57 2.62 11.18 18.27 11.26 22.73 32.91 41.49 12 Ix_AR2 ActiveIntronRegion 0 7.44 4.42 25.88 9.03 9.96 10.05 12.87 11.19 9.71 19.09 0.40 0.00 5.71 0.00 0.00 0.00 0.34 5.99 16.48 8.15 11.85 20.04 26.73 13 Ix_SR1 SilentIntronRegion 0 5.17 6.85 15.63 11.37 7.65 7.66 7.59 10.24 7.66 16.93 0.28 0.62 1.01 0.00 0.18 0.00 0.00 2.30 6.33 7.17 8.88 14.18 18.30 14 Ix_AR3 ActiveIntronRegion 0 13.56 6.77 32.75 24.68 16.38 12.62 13.91 21.49 12.99 30.25 0.10 0.00 2.55 0.00 0.00 0.00 0.00 2.89 9.55 10.74 10.88 18.80 24.96 15 Ix_SR2 SilentIntronRegion 0 6.27 3.07 11.95 9.77 4.19 8.92 6.29 10.23 8.85 14.91 0.00 0.00 0.65 0.00 0.00 0.17 0.92 4.98 5.52 3.33 7.76 12.12 17.25 16 ER2a ExonRegion 0 0.00 1.96 1.20 1.30 1.72 1.18 0.00 0.83 0.00 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.07